Os05g0177400

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0177400| Description = Cyclin-like F-box domain containing protein| Version = NM_001061331.2 GI:297603933 GeneID:4337966| Length = 3190 bp|...")
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Gene Name

Os05g0177400

Description

Cyclin-like F-box domain containing protein

Version

NM_001061331.2 GI:297603933 GeneID:4337966

Length

3190 bp

Definition

Oryza sativa Japonica Group Os05g0177400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4599241..4602430

Sequence Coding Region

4599241..4599323,4601458..4602430

Expression

GEO Profiles:Os05g0177400

Genome Context

<gbrowseImage1> name=NC_008398:4599241..4602430 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4599241..4602430 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagggggattccagggatgggcgcagggggtggatcccgccgccggcggagaagctcaccgacgacctcctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctccaggcggtggcgccgcgtcatctcccaccccgaccaccgtcacctgctgccgcggtatcacctcggcgacgccattgtcggcttcttctactccgacaccttcaccaacgtcacaggggaaggccgcccgtttgttgacccctcgctccccttcctgcccaagtgcgagtttctcaacgtccttgacagctgcaatggcctcctcctgtgccgctgctggaggctcgcagatccacggagatttgattaccttgtggttaatcctgccactgaacaatgggtcatcctgcctgattccggctggtctgacaaggtgcagactgctcgtttggggttcgatccagtggtctcctcctcgcactttcatgtgtttgagttcgtggaggatggtgctggggatgccgatgggaatgtcgatgatgacgacgactttgatgggcatgtcaaaggggtggaaatctactcatccgtaactggagaatggagtcacaaggacaatggttgggactgggaaatcaggatacgcgatgaatggaatagcgtgttttttgatggtgtgctgcatttgatcactctggagtatgtggtggcagcggttgacgtggaggggaacgcttggaggaccattcctatgccacaaagtctagttgagcctttcgatggtattggtgagggattcattggcctgtctcagggttctctgtattttgtaaacaccgatcacgatgaaccatataaagtatcagtatgggttcttgaggactacagcagtgaacagtggatctggaagcacactgtcagccatttacatctatttcgaaccaagagactcctttttgttttccccaccacagaagcttgggcggagacggtgctggccgccgggcctagcgggcggagtggcgacggtggtggggcctag</cdnaseq>

Protein Sequence

<aaseq>MAEGDSRDGRRGWIPPPAEKLTDDLLVEILSRVPYKSLCRSKCV SRRWRRVISHPDHRHLLPRYHLGDAIVGFFYSDTFTNVTGEGRPFVDPSLPFLPKCEF LNVLDSCNGLLLCRCWRLADPRRFDYLVVNPATEQWVILPDSGWSDKVQTARLGFDPV VSSSHFHVFEFVEDGAGDADGNVDDDDDFDGHVKGVEIYSSVTGEWSHKDNGWDWEIR IRDEWNSVFFDGVLHLITLEYVVAAVDVEGNAWRTIPMPQSLVEPFDGIGEGFIGLSQ GSLYFVNTDHDEPYKVSVWVLEDYSSEQWIWKHTVSHLHLFRTKRLLFVFPTTEAWAE TVLAAGPSGRSGDGGGA</aaseq>

Gene Sequence

<dnaseqindica>3108..3190#1..973#atggcggagggggattccagggatgggcgcagggggtggatcccgccgccggcggagaagctcaccgacgacctcctcgtcgagatcctctcgcgcgtgccctacaagtcgctctgccgatccaagtgcgtctccaggcggtggcgccgcgtcatctcccaccccgaccaccgtcacctgctgccgcggtatcacctcggcgacgccattgtcggcttcttctactccgacaccttcaccaacgtcacaggggaaggccgcccgtttgttgacccctcgctccccttcctgcccaagtgcgagtttctcaacgtccttgacagctgcaatggcctcctcctgtgccgctgctggaggctcgcagatccacggagatttgattaccttgtggttaatcctgccactgaacaatgggtcatcctgcctgattccggctggtctgacaaggtgcagactgctcgtttggggttcgatccagtggtctcctcctcgcactttcatgtgtttgagttcgtggaggatggtgctggggatgccgatgggaatgtcgatgatgacgacgactttgatgggcatgtcaaaggggtggaaatctactcatccgtaactggagaatggagtcacaaggacaatggttgggactgggaaatcaggatacgcgatgaatggaatagcgtgttttttgatggtgtgctgcatttgatcactctggagtatgtggtggcagcggttgacgtggaggggaacgcttggaggaccattcctatgccacaaagtctagttgagcctttcgatggtattggtgagggattcattggcctgtctcagggttctctgtattttgtaaacaccgatcacgatgaaccatataaagtatcagtatgggttcttgaggactacagcagtgaacagtggatctggaagcacactgtcagccatttacatctatttcgaaccaagagactcctttttggtcatgactacaaagttgtctcaattcatccggaagggaatatcattttcttggttttgccgcatagcaaaatactcatgtcctatgaaatggagagcagagaagtgtgttttatatgtgggattggaggtagttccgactggcttctgtatcttccatatgttcccttgtactcagaatcattggcagatgggcattgatcatcgtacttgcataggtgaacacttggtttgttaaccttaattatgacattggtgttaggatgttgataagatcagcagcaacttggtagatctttctgatgttgtgctacattgttgtaggttgttgagtgcattctgcaaccgcactttctgggccaacttttcagtaacttagaactttattcggattttgtaataatgatttgtatttgattgtttgcggtgtcaaaaaccctctagcatttatcatttaacaatggatgctatatcctataaacatatattctggtgagttatgcatgactaatatcagtttatgttgttgcttatttcctcatcaggaaaagcttatttctctcaatatttgttgagatttcatattacattatttcctcatcaggtaatgcttatttatgtcaatatttgttgagacttcatattacattgtttactgtttttctcccattggatcccctcccctggtcatgcatagtacagctattttgttcactttacatgggagtttgtattagttctgttttgcatgggagtttatattagttcgtcagtgctgaaatgatatgtactagttgaggaagggtactctttttattagattgtctagaatatttgatgtatcggatactggctcgtataaaagatattaccacaatcgtagaacatgttgagagcatactcgtctataactaattattctttttcgtcacacacaaattggcattactgtatttcccataagcatattttagcttcaatgtaatgttttatgtggtagctgctgaaatcatgtcagtggaactcaatggctatggctgactgcctaacttttgtctcctgggtgtgttgaacaatgtgtcttctggacagtggagactactgaaattgttttgtttgtgttcgattatagtcgttttactgtaagtttttgatattttagatgcctagagttgctgtatatcgtcttgacttggtggttaatgatggaacaaatattgattgatcatttcatcaacctgctttttttttgtttgatctcttgctattttatttcttccactttgatcataaatgtctgcatgctgcactgcactagtgctgcaattatggaaattatagtagcccccccccccccccccccccccgccctctcttaacttcacaagcacccttccttttttaggaaaagctacctcgcaccaaattcaagatatacaatgactctaggcatgttaacttccataacttctgcagtccatggaccatgaattattgaaaatagacctgttggagcataattacctctgcttgaatagtggataaaatcatagtcgaaatgttatttgttaagtttgataatggcgcatactcaaaatgacaaaaatacgtgaacaggaggtacgattgtactacgaagggagaaaagagtgcatatgtgtttacttaatctcagtggcgtatctatgaaagggaagtggatcctctgactaaaacagtttgcacttgagttactaatatatgggctttactttactatggcccttatgtcagtggcacgactgcaaactgcataaagttagggaagcctcgtccctatgaaacgtttacagcgtaaagtgataagtggtacattctctaagtcatatttgtactgacttttttgaaaagcatattttttagcagcatttttatgatcaatatttggtctgaaacacgtgtaaattatattttatcgtctacttgttagcttatcacaatcaaatttgaattttgaaacttaattttgaagttgattttagggtttatcatcatattctatttttttagtactattgtcttttagacagctagtaacgtatatataattacctatatacttttttcgctctccccctcctccattcccttcccagttttccccaccacagaagcttgggcggagacggtgctggccgccgggcctagcgggcggagtggcgacggtggtggggcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0177400, RefSeq:Os05g0177400