Os05g0178000
| Gene Name |
Os05g0178000 |
|---|---|
| Description |
NPH3 domain containing protein |
| Version |
NM_001187313.1 GI:297723756 GeneID:9267199 |
| Length |
4815 bp |
| Definition |
Oryza sativa Japonica Group Os05g0178000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:4632611..4637425 |
| Sequence Coding Region |
4632611..4633507,4636817..4637425 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:4632611..4637425 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:4632611..4637425 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagccgtcgtcgccgtcgccgtcgccgccgcacggcgccgccgccgtgaagcagccggcctcctcgccggacgcgcggctgacgccttcctcggttgtcgccgccgccgctgttggcataggtgtgacgcccccgcggcgcagctgcgacgacgcggcgtcgtgcgtcgtcaacgacgtcgacgcgttcgcgcgcaccattgccagcatcaggtcgaagccggcctcggcggcggcggcggcggcctcgtcttcgtcggatggcggcggcgaccacctcgccaccgtgctggcgcactacgcggccaggtggctccccgacgtcgcgtcgtcgccgtcggggaggttcctgctgccgccgcagagccccacggcgacgtggatcaggaagcgcctcctgctcgagtccctcgtcgccgcgctcccgcccgacggcggcgacggggacgacggcggcggcggcgtcacgtgcgacttcctgctccgcctcctccgcgccgggagcatggccggggccgacgccgcgctcctcgccgacctcgaggcgcgcgcggcgcggcggctggaccaggcctcgctcggcgccgtcatgatcccggcgttccgcgccgccgccggtgacgcgcccggcgcgggcgcgacgctgctcgacgtgccgctcgtgctccgcctcgtgcgcggcttcctccgcgagggcggcaaggcgggcgccggcggcggcggcggcgcggcggccgcctgcagggtggcgaggctggtggacgcgtacctcgccgaggcggcgctggaggccgggctgcggccggcggagttcgaggagctcgcgcgcgccgtgccggcgcacgcccgcgccgccgacgacgggctgtaccgcgccgtcgacacctacctcaaggcgcacccgcacgcagggaaggaggagaggcgatcgctgtgccggctgatcgacgcgcgcaagctcacggcggaggcggcggcgcacgccgtccagaacgagcgcctccccgtgcgctgcgtcgtccaggtcctcttctccgagcacggcagcaagctcacccgcctcgccgagtggaccaccggctccttccgctccctccagtcccgcagccccgccgacctcatcgtcaccggcggcggcgccaatggcggcgcgcggtgcccctccaagcgcgaggtcgccgcgcagcaccacgagctccgccgcctccgcgaggacgtgtcccgcctccaggtgcagtgccacgcgctgcaggcgcaggtggacaggctcagctcggagcgccgccgccggccggggggcctgttcaagctgctgttcggcggcggcggtggcgctggcgccaccggggccgtcgtcgtggacgactccgacagcgggttggacaggacgccgctgagcgggaagaagggcgtcgtcgtccgcgcgaccgccgcggcggcggcggcgtcgacgccggcgtcgggcacgccggccgtggcgaggtggcgcaggtcgcactcgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MKPSSPSPSPPHGAAAVKQPASSPDARLTPSSVVAAAAVGIGVT PPRRSCDDAASCVVNDVDAFARTIASIRSKPASAAAAAASSSSDGGGDHLATVLAHYA ARWLPDVASSPSGRFLLPPQSPTATWIRKRLLLESLVAALPPDGGDGDDGGGGVTCDF LLRLLRAGSMAGADAALLADLEARAARRLDQASLGAVMIPAFRAAAGDAPGAGATLLD VPLVLRLVRGFLREGGKAGAGGGGGAAAACRVARLVDAYLAEAALEAGLRPAEFEELA RAVPAHARAADDGLYRAVDTYLKAHPHAGKEERRSLCRLIDARKLTAEAAAHAVQNER LPVRCVVQVLFSEHGSKLTRLAEWTTGSFRSLQSRSPADLIVTGGGANGGARCPSKRE VAAQHHELRRLREDVSRLQVQCHALQAQVDRLSSERRRRPGGLFKLLFGGGGGAGATG AVVVDDSDSGLDRTPLSGKKGVVVRATAAAAAASTPASGTPAVARWRRSHS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..897#4207..4815#atgaagccgtcgtcgccgtcgccgtcgccgccgcacggcgccgccgccgtgaagcagccggcctcctcgccggacgcgcggctgacgccttcctcggttgtcgccgccgccgctgttggcataggtgtgacgcccccgcggcgcagctgcgacgacgcggcgtcgtgcgtcgtcaacgacgtcgacgcgttcgcgcgcaccattgccagcatcaggtcgaagccggcctcggcggcggcggcggcggcctcgtcttcgtcggatggcggcggcgaccacctcgccaccgtgctggcgcactacgcggccaggtggctccccgacgtcgcgtcgtcgccgtcggggaggttcctgctgccgccgcagagccccacggcgacgtggatcaggaagcgcctcctgctcgagtccctcgtcgccgcgctcccgcccgacggcggcgacggggacgacggcggcggcggcgtcacgtgcgacttcctgctccgcctcctccgcgccgggagcatggccggggccgacgccgcgctcctcgccgacctcgaggcgcgcgcggcgcggcggctggaccaggcctcgctcggcgccgtcatgatcccggcgttccgcgccgccgccggtgacgcgcccggcgcgggcgcgacgctgctcgacgtgccgctcgtgctccgcctcgtgcgcggcttcctccgcgagggcggcaaggcgggcgccggcggcggcggcggcgcggcggccgcctgcagggtggcgaggctggtggacgcgtacctcgccgaggcggcgctggaggccgggctgcggccggcggagttcgaggagctcgcgcgcgccgtgccggcgcacgcccgcgccgccgacgacgggctgtaccgcgccgtcgacacctacctcaaggtgagtgtgcatcgatcgcgcgccatggacacaatcatttacaattatgtcacaatctctctttgcctggtgatgattatgttttcacgatgatttgattagttaaatactccctccgtatcagtttgtaacaggatgtaagacgttttaagtttagctaaagtcaactgctttaagtttgattaaatttgtagaaaaaagtagtaacatttttaacctaagacaaatttattataaaaatatattcaattatttatttgataaactaatgtagtattataaatattactatatttgtctatatttatctaaaaatttagttaaacttaaaactgtttgactttgactaaaattaaaaacgtcttacaacctggaacaagtgagcagtatttacaaataataatcttctgtacatcgtggcagtatgttctggtaggaagaaatagggtctcgatctggccgttaaagatcggttaagaatgcatcgatggctttaattatcttggaacatgatgtcatgatgcatccatttaattaacatgttatatgattagggtgttatcaatatcgtagcatgttggttttcttaaaaaaaatggaacacaaaatcactatgctacattttgtaggaaatgctagcttagctaaatttttcgtcacaaataacagtgtgagtgtgtgacgctaaatatttgagaaaaaaacacattataagttaattacataggactaggagcaatgttgccaactctgatcgtttgaactatgattgataagatgaggaaaaaaaataaagcaactaaaactaattactgggtaattatttttatattagtgctagtagtggtttaaagtcaatgaaaatatattacgatgaaaaattaaaaaaatatctccaacgtattttttttaaaaaaaacctaaattatatgataagctatatcaagtattttatttgtcccaaaatataataatatataaagttcaaaattattccaaatataacaattaccacttgtaaaagatatttttttattactcctaaactactcatcctatcccttatctagtacagacctatcgtaagaagataaataaatctttctacccctcttatttgtagccgtgtaaaaaattaaaacttattatattttaacagagagcaagctatagtatataaagcaaatgaatgaaaataatacagtacatgtggagaaaaaaaattgggactgtggccctgtttagatcccaactcaaaattaaatttttcaccctatcacctcgaacattttaacatctatatgaagtattaaatatagactaaaaacaactaattgcacatattgcgactaatttgcgagacgaatattttaaacctaattgttttatgatttaacaatatggtgctacattaaacatttgctaatgacagattaattagacttaataaattcatcgcggtttactaacggattctgtaattagtttttttattagtgtctaaatactctatacgacactctatatagtatcttaattgacacgtcaaaactttacacccctacatcttaaacatccctttatctccaagattcccatttgcaaaccagggtgagcatgccaacttaagatatgagatgtggtgattaaccccttttcaccttggcattggctgtccatgatgtgataggccaaaaaagattttccatgcacgtatttccatgcatggtgctggaggcgatgtgactgtgttggaagcatatgcgacggtcgaggtaaaaaaaaaagaataaccatggaagtaagagaggccagtttcaggctcggtatgtgtttctgcgtgtttgaccgcacggtagttcatgttggaccattcctaatcatcattttgctcaggagtcaggagtgtgtttttggtttttgtgattaagctcaattactttgcgttgatacgacgattattgtttaagccaatgtttaaaatttgaaattaaatcagacgtttcttttccttttgttcactcgagtttgactcaaggccacttaagaatagaggtataattgtatccattcgattcaactacatataattgtgtttgggtttcatcatttgtttattggtttttcgatcataactaaaattttgaattgtaaaacttaattttagagttgtttttgaaggttttattttttttatcgtagtctattttctaatcttgtattttaaaccgctaacaactcgaatataaatttatctatttcgtgcattcgtttcggtttatcggtcatagctcaaccgatcatgatcatcttataggccgcaaagaaaaaaaagctttctaaactgaccactgtttttttttaaataaatgagaataaaaattgttcctatttgaacaaaactatttccactcccttttatttttctccccctgtgcatggatccttctttgctagtgcttcactgccacttatgtcattgcttgaatagaagagaccaatgagagtatcattcagcatcccaactccacaccaaccaatttgtatcgatcaccagcaacacacggtccagtcccatcggagggcaaaagtcactttgttttttgtcctagcaattgccatgttttggtacactctcaccagctaaaatcacacatgcagtgcagtgcagtgcagtgtgatgctgttctgaagaaaacggcagaacacagatgtgctcacgtgagctacctagcatcgctgcttcagctcgatcaatccaatccaactgctgcaagtgctatgcaacaagagagttgttaccctgcttgttggtttcattcttgtagcctctcacttttttttaaaaaaagaaaaccaatttttgatatcgtcatttttaatatgttagcatagatttcatatgtgcttattaattgcttataaagattggtgtatgtttttgtagggatggatgtgtgtgcgtatatataagggtttgcgtttgtaatgtgtttaatagagagggagagagagcgtgcatgtttaaaataatgtgataatcaaatttaatctaagtatctactttaaaagagcacaaaatgtttttaagtgttaatgttagtgtgaattttcatggataattaattggcatgtagaaatttaacctttgatgaaaagaaaacgtaagtgctcctctgtaatatatagtatctattttacaagattttggttacgatttggttcaattcctccaaaatccctttgaaatttctccatttcaaaaaaaaagagaaaaaactaagtggttgattaatttgctgtgtgcaggcgcacccgcacgcagggaaggaggagaggcgatcgctgtgccggctgatcgacgcgcgcaagctcacggcggaggcggcggcgcacgccgtccagaacgagcgcctccccgtgcgctgcgtcgtccaggtcctcttctccgagcacggcagcaagctcacccgcctcgccgagtggaccaccggctccttccgctccctccagtcccgcagccccgccgacctcatcgtcaccggcggcggcgccaatggcggcgcgcggtgcccctccaagcgcgaggtcgccgcgcagcaccacgagctccgccgcctccgcgaggacgtgtcccgcctccaggtgcagtgccacgcgctgcaggcgcaggtggacaggctcagctcggagcgccgccgccggccggggggcctgttcaagctgctgttcggcggcggcggtggcgctggcgccaccggggccgtcgtcgtggacgactccgacagcgggttggacaggacgccgctgagcgggaagaagggcgtcgtcgtccgcgcgaccgccgcggcggcggcggcgtcgacgccggcgtcgggcacgccggccgtggcgaggtggcgcaggtcgcactcgtga</dnaseqindica> |
| External Link(s) |
