Os05g0178100

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0178100| Description = GA 3beta-hydroxylase| Version = NM_001061333.1 GI:115462396 GeneID:4337968| Length = 1904 bp| Definition = Oryza sa...")
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Gene Name

Os05g0178100

Description

GA 3beta-hydroxylase

Version

NM_001061333.1 GI:115462396 GeneID:4337968

Length

1904 bp

Definition

Oryza sativa Japonica Group Os05g0178100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4640047..4641950

Sequence Coding Region

4640286..4640739,4641131..4641289,4641389..4641930

Expression

GEO Profiles:Os05g0178100

Genome Context

<gbrowseImage1> name=NC_008398:4640047..4641950 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4640047..4641950 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagatcatgacatcgtcgtcgacctcgccgacctcgccgacctcgccgctggccgccgccgccgacaatggcgtcgccgccgcctacttcaacttccgcggggcggagcgcgtgccggagtcgcacgtgtggaaggggatgcacgagaaggacaccgcgccggtggcggcggcggacgcggacggcggcgacgcggtgccggtggtggacatgagcggcggcgacgacgccgcggtggcggcggtggcgcgcgcggcggaggagtggggcgggttcctgctcgtcgggcacggcgtgaccgcggaggccctggcgcgcgtcgaggcgcaggcggcgcggctgttcgcgctgccggcggacgacaaggcgcgcggggcgcggcggcccggcggcgggaacaccggctacggcgtgccgccgtacctcctccggtacccgaagcagatgtgggccgagggctacaccttccctccccctgccatccgcgacgagttccgccgcgtctggcccgacgccggcgacgactaccaccgcttctgctccgccatggaggagtacgactcgtcgatgagagctctgggcgagaggctcctcgccatgttcttcaaggcgctcgggctcgccggcaacgatgcccccggcggcgagaccgagcggaagatccgcgaaacgttgacgtcgacgattcacctcaacatgttccctaggtgtccagatccagaccgggtggtcgggctggcggcgcacacggactcaggcttcttcaccttcatcctgcagagccccgtgccggggttgcagctgctccgccaccggccggaccggtgggtgacggttccggggacgccgggggcgctcatcgtcgtcgtcggcgatctcttccatgtgctcaccaacgggcgcttccacagcgtgttccaccgcgccgtcgtgaaccgggagagagaccggatctccatgccctacttcctcggtccgccggccgacatgaaggtgacacctctcgtggcggcggggtcgccggagagcaaggccgtgtatcaggccgtgacatggccggagtacatggctgtaagggataagttgttcgggacaaatatatcggcgttgagcatgattcgagtagcgaaggaagaggacaaggagagttag</cdnaseq>

Protein Sequence

<aaseq>MQIMTSSSTSPTSPTSPLAAAADNGVAAAYFNFRGAERVPESHV WKGMHEKDTAPVAAADADGGDAVPVVDMSGGDDAAVAAVARAAEEWGGFLLVGHGVTA EALARVEAQAARLFALPADDKARGARRPGGGNTGYGVPPYLLRYPKQMWAEGYTFPPP AIRDEFRRVWPDAGDDYHRFCSAMEEYDSSMRALGERLLAMFFKALGLAGNDAPGGET ERKIRETLTSTIHLNMFPRCPDPDRVVGLAAHTDSGFFTFILQSPVPGLQLLRHRPDR WVTVPGTPGALIVVVGDLFHVLTNGRFHSVFHRAVVNRERDRISMPYFLGPPADMKVT PLVAAGSPESKAVYQAVTWPEYMAVRDKLFGTNISALSMIRVAKEEDKES</aaseq>

Gene Sequence

<dnaseqindica>1212..1665#662..820#21..562#gtgcgttagccaacgagttcatgcagatcatgacatcgtcgtcgacctcgccgacctcgccgacctcgccgctggccgccgccgccgacaatggcgtcgccgccgcctacttcaacttccgcggggcggagcgcgtgccggagtcgcacgtgtggaaggggatgcacgagaaggacaccgcgccggtggcggcggcggacgcggacggcggcgacgcggtgccggtggtggacatgagcggcggcgacgacgccgcggtggcggcggtggcgcgcgcggcggaggagtggggcgggttcctgctcgtcgggcacggcgtgaccgcggaggccctggcgcgcgtcgaggcgcaggcggcgcggctgttcgcgctgccggcggacgacaaggcgcgcggggcgcggcggcccggcggcgggaacaccggctacggcgtgccgccgtacctcctccggtacccgaagcagatgtgggccgagggctacaccttccctccccctgccatccgcgacgagttccgccgcgtctggcccgacgccggcgacgactaccaccgcttctggtacgcgtttaccgccgatcgatcgatcgatccgccattgcttgcatgcaactaacctagctagcttccgcgcgtgttcgtccgatccggcccggccagctccgccatggaggagtacgactcgtcgatgagagctctgggcgagaggctcctcgccatgttcttcaaggcgctcgggctcgccggcaacgatgcccccggcggcgagaccgagcggaagatccgcgaaacgttgacgtcgacgattcacctcaacatgtatgtaaactcatatggatgtggattttctatgcatagatgccatagcactgcacccatcatttacatacgattttgagaaaatataagtttataaacaagctatatttaatctacaactaaaaaaacaaaaataataaaatcaggcaataaatactagtaaaatttgttatttttacttcgtgtgtagatcgaatttaattttacatatttatatagtgttttatactattattgtaatctatcttatcaaattctatgattttttataactatttaaactacatgtatgatacacaattagaaaatacttttccatacaaatatatcttcacatgcaatggtgtttggagctgatcgacacgtgtcactctgacatggccacacgcaggttccctaggtgtccagatccagaccgggtggtcgggctggcggcgcacacggactcaggcttcttcaccttcatcctgcagagccccgtgccggggttgcagctgctccgccaccggccggaccggtgggtgacggttccggggacgccgggggcgctcatcgtcgtcgtcggcgatctcttccatgtgctcaccaacgggcgcttccacagcgtgttccaccgcgccgtcgtgaaccgggagagagaccggatctccatgccctacttcctcggtccgccggccgacatgaaggtgacacctctcgtggcggcggggtcgccggagagcaaggccgtgtatcaggccgtgacatggccggagtacatggctgtaagggataagttgttcgggacaaatatatcggcgttgagcatgattcgagtagcgaaggaagaggacaaggagagttagaactatggtatgattgcaattatccatgccagaaaaaaaaaattagggatatgatttgttgtgctaaaataaggaaggcaaattttaattataagcaagtataggtagttttcccttgaataaactttttttcttaacagctttcataaattggaaaggtgaatactgacctgatgagagtttcactgtagaaccaggacaaggaataaggaataagttgaggcaacctgaacaatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0178100, RefSeq:Os05g0178100