Os05g0178400

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0178400| Description = Similar to Protein phosphatase 2A B'kappa subunit| Version = NM_001061334.1 GI:115462398 GeneID:4337970| Length = 31...")
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Gene Name

Os05g0178400

Description

Similar to Protein phosphatase 2A B'kappa subunit

Version

NM_001061334.1 GI:115462398 GeneID:4337970

Length

3124 bp

Definition

Oryza sativa Japonica Group Os05g0178400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4648520..4651643

Sequence Coding Region

4648781..4649149,4650352..4651458

Expression

GEO Profiles:Os05g0178400

Genome Context

<gbrowseImage1> name=NC_008398:4648520..4651643 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4648520..4651643 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggaagcagtttctcggcaagatctcgtggaaggcgccgaaatccggcggcggcggcggcggctcgccgacggccaagtcgccgctgtcgaagggcgccgggaatggggagcctcccgcgccgcccgcggccgccgcaggaggaggaggaggagcggagggggagaccagggaggacgtgttcctccggaagctgaacgtctgctgcgtcgtgttcgacttctcctccgccgccgccgctgccgccgcagagcgcgggagggactcgccggagagggagaggaagcggcaggtgctcgtgtccctcgtcgactgcgtcggcgccgccgaggagcccctcaccgaggcgatgatctccggctgcgtccgcatgttcgccatcaacctcttcagggtgttcccgcccaaggtccggtccggcgccgccggggcggcggaggccgacgaagacgagcccttcttcgatccctcatggtaccacctgcaggccgtttatgagctgctcctccgcttcgtcatgtccccggtcgtcgacgtcaagattgctcgcaagtacatggacaattcttttgtgtctaggttgctcgacttgttcgattccgatgatccgagagaaagggaatgcttgaagacagtcttgcataggatatacggcaaattcatgggcaaccggcctttcatccgcaaggcggtgagcaatatcttctataggttcgtgttcgagaccgatcgccacaatgggattgctgagctgttggaggtgtttgggagtgtgattagtgggttcgcgaagccattgaaggaggagcataagttgttcctgtggaaggcgttagttcctcttcacaaaccgaaaacggtgggcgtgtatctcccgcaattgacgtattgtattatacaattcatcgagaaggaaccaaagctcgcggggactgtaatcagaggcctactgaagtactggccagtgacgaacagtcagaaggagatgatgttccttggggagttggaggaggtgctggaattgacagaaatggctgagttccagaagtgcatggttccgctgtttcgaaggattgcacactgtctaaatagctcacactttcaggttgctgagagggcactattcctgtggaacaatgagcacttgtttgatttgatctcccaaaatcgccaaactattatgccgatcatatatccagcgctggaaaggaacactcgttggcactggaaccaatcagttctaaatgtaacaatgaacgtccggaaaatgttccttgaaatggatgagggactgttgttaacttgtcagaggaatttccaagaggaggaagaaaagcgagctgcatctgaggagcggagaaagcttatatgggagaacctagagagaaacgcgtcattccgtccagtcaccggagacattggtttctctgttcttcctgcatctgctcccttggtagcacccaccatgacataa</cdnaseq>

Protein Sequence

<aaseq>MWKQFLGKISWKAPKSGGGGGGSPTAKSPLSKGAGNGEPPAPPA AAAGGGGGAEGETREDVFLRKLNVCCVVFDFSSAAAAAAAERGRDSPERERKRQVLVS LVDCVGAAEEPLTEAMISGCVRMFAINLFRVFPPKVRSGAAGAAEADEDEPFFDPSWY HLQAVYELLLRFVMSPVVDVKIARKYMDNSFVSRLLDLFDSDDPRERECLKTVLHRIY GKFMGNRPFIRKAVSNIFYRFVFETDRHNGIAELLEVFGSVISGFAKPLKEEHKLFLW KALVPLHKPKTVGVYLPQLTYCIIQFIEKEPKLAGTVIRGLLKYWPVTNSQKEMMFLG ELEEVLELTEMAEFQKCMVPLFRRIAHCLNSSHFQVAERALFLWNNEHLFDLISQNRQ TIMPIIYPALERNTRWHWNQSVLNVTMNVRKMFLEMDEGLLLTCQRNFQEEEEKRAAS EERRKLIWENLERNASFRPVTGDIGFSVLPASAPLVAPTMT</aaseq>

Gene Sequence

<dnaseqindica>2495..2863#186..1292#ccctccccaacatcccgcccccggatctgagccgctgcggcgggcacaacacagcgcgtgcgtgggtggcaagacgggttctttgcctttgcaactttgcaagatttgggcttttggtttcttggtggttgtggattttttttttttgagagggatgggtgtttgattggagtgggttgggagccatgtggaagcagtttctcggcaagatctcgtggaaggcgccgaaatccggcggcggcggcggcggctcgccgacggccaagtcgccgctgtcgaagggcgccgggaatggggagcctcccgcgccgcccgcggccgccgcaggaggaggaggaggagcggagggggagaccagggaggacgtgttcctccggaagctgaacgtctgctgcgtcgtgttcgacttctcctccgccgccgccgctgccgccgcagagcgcgggagggactcgccggagagggagaggaagcggcaggtgctcgtgtccctcgtcgactgcgtcggcgccgccgaggagcccctcaccgaggcgatgatctccggctgcgtccgcatgttcgccatcaacctcttcagggtgttcccgcccaaggtccggtccggcgccgccggggcggcggaggccgacgaagacgagcccttcttcgatccctcatggtaccacctgcaggccgtttatgagctgctcctccgcttcgtcatgtccccggtcgtcgacgtcaagattgctcgcaagtacatggacaattcttttgtgtctaggttgctcgacttgttcgattccgatgatccgagagaaagggaatgcttgaagacagtcttgcataggatatacggcaaattcatgggcaaccggcctttcatccgcaaggcggtgagcaatatcttctataggttcgtgttcgagaccgatcgccacaatgggattgctgagctgttggaggtgtttgggagtgtgattagtgggttcgcgaagccattgaaggaggagcataagttgttcctgtggaaggcgttagttcctcttcacaaaccgaaaacggtgggcgtgtatctcccgcaattgacgtattgtattatacaattcatcgagaaggaaccaaagctcgcggggactgtaatcagaggcctactgaagtactggccagtgacgaacagtcagaaggagatgatgttccttggggagttggaggaggtgctggaattgacagaaatggctgagttccagaagtgcatggttccgctgtttcgaaggattgcacactgtctaaatagctcacactttcaggtaaaatctgttcctggacttccagtttgaaacatccattagtcaaccagtgctcactgttttagagcctactcaatattgttctgacgcatcactgcaacaagtatctagcttaggtgataaaaaaggctgagaagtcgtcatgcacatgttttataatttggggagttaattcatttcaggatcaggatttttttccctgtagcattggtattcctaaacaagcactgcattttatgtcaattattttgacagtttgtgttgtatgcacaaagagttccctttgtaaggcccttcacatggtcttacaagattagaaacaacctacttctttttgcttagttttccaccatctctttgcatgacttgtggaggtgggagttcatgttatcttggtaataagcagcaaacactccatgttgtatttgaataattagaagcttatcaaaattaatacatcacctcaaacatcctgccctttgcatctgtgaaacttccaagctggctccattttttttctgtggtagcacagggtaatatggtgtaaaaaaaacactagtgactggtttgtaaggaagacatagcataatgtagagtacctgagttggaacatccaaactacataactgacaatgaactctataatatgaatcaaccaatcaacaatataaacgtttttttgtttttggtcacggttgctagctagagggaagaaacaagaaacttaactggaaaaaagggtatagatgattgaacttgtcagctgagcatttcatataatattgttaaatcccaggttctgaaactgttctactcattttctgtgatgaaaattttgccgtgtagttcacaaataacacatatgctggatatagcagaaggatattttagaaagcttaatggatacaatacttgtctcctttttctcttcattggagaagtttgttgttggactatatgaggcttgagaagtagagataagtgtagccctgttcatattcatgccaggtaacactggtgtgagtttttatggctatacgaggccttagatcaacctagtacttgtatgcgccatccaacgatatgggcaaaggatgaatggaaaatcttattagttgtttgtcatatgcaattttttataatttgcacacggtgttgagtagcatggaaactcaagagcaatttttcatccttgttaacaggttgctgagagggcactattcctgtggaacaatgagcacttgtttgatttgatctcccaaaatcgccaaactattatgccgatcatatatccagcgctggaaaggaacactcgttggcactggaaccaatcagttctaaatgtaacaatgaacgtccggaaaatgttccttgaaatggatgagggactgttgttaacttgtcagaggaatttccaagaggaggaagaaaagcgagctgcatctgaggagcggagaaagcttatatgggagaacctagagagaaacgcgtcattccgtccagtcaccggagacattggtttctctgttcttcctgcatctgctcccttggtagcacccaccatgacataatatgacatgcgttcggaatttcgaatgtacttcggttcatttcattgttagcttgtatgggttatgtgcagggcattttgttatatttgtaagccccttgtgctcaagtctgtaattaatagttattggtttgaggatgaacttgtgattctttaatggtgtactctctagtgatggacatttctctgtttgagaagataatgtccaattaaacccgactgctctgtgaacaactgaggatactgagattgattttcttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0178400, RefSeq:Os05g0178400