Os05g0179800

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0179800| Description = Conserved hypothetical protein| Version = NM_001061340.1 GI:115462410 GeneID:4337976| Length = 3053 bp| Definition ...")
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Gene Name

Os05g0179800

Description

Conserved hypothetical protein

Version

NM_001061340.1 GI:115462410 GeneID:4337976

Length

3053 bp

Definition

Oryza sativa Japonica Group Os05g0179800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4767317..4770369

Sequence Coding Region

4767541..4767861,4769279..4769528,4769829..4770193

Expression

GEO Profiles:Os05g0179800

Genome Context

<gbrowseImage1> name=NC_008398:4767317..4770369 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4767317..4770369 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggggaggcagcaggaggggcgcggcggcggcggcggaggaggcgaggatcggcaccagcaacgtgttcgcggcgctcgacacgctcaagaggaggaagaagccgtcgtcgtcgtcgaagaagcacgcggagaaggagaaggaggtgctgtgggcccccgcgccgctcaccaccaggtcctgggccgacgtcgaggacgacgacgacgacgactacttcgccaccaccgcgccgccgcgccccgtctgggggacacaccaccacgccgctgacgcccacgacgacgaccacgacgagcaagctgcccttgaacaggaacttgaaagtgaagatgaggaggttgatgatgatgctgaggatgaacacgaacatgaaacagaggatgctacccctgctgaacctgcaatgaataaagctgcagctcctcctgcaccaccgaaagatactgaaagacaactctccaagaaggagttaaagaaaaaggaactggaagagcttgatgctattttggctgagttggaactttctagcaaatcaaacaatgatgctcaaaatgaaacaaacggcaagaaaggtgcagagcaagctgctgatggagagaataaagaaggtgcacctgcccctgcagagagcaagagctcaaagaagaagaaagctaagaaagacaagtctgcaaaggaggcgaaagaaacacaggaacttaatggtggggtggaagaagctgctggtgctgagcctgatgaagaggtagcttctatggatgtcaaggatcgtataaagaaggtagcctcaatgaagaaaaagaagtcaagcaaagagatggacacagcagcaaagattgctgcatctgaggccgcagcaaggagcgcgaagcttgcagctgcgaagaagaaagagaagagccattacaaccagcagcctgtgcggtga</cdnaseq>

Protein Sequence

<aaseq>MAGGGSRRGAAAAAEEARIGTSNVFAALDTLKRRKKPSSSSKKH AEKEKEVLWAPAPLTTRSWADVEDDDDDDYFATTAPPRPVWGTHHHAADAHDDDHDEQ AALEQELESEDEEVDDDAEDEHEHETEDATPAEPAMNKAAAPPAPPKDTERQLSKKEL KKKELEELDAILAELELSSKSNNDAQNETNGKKGAEQAADGENKEGAPAPAESKSSKK KKAKKDKSAKEAKETQELNGGVEEAAGAEPDEEVASMDVKDRIKKVASMKKKKSSKEM DTAAKIAASEAAARSAKLAAAKKKEKSHYNQQPVR</aaseq>

Gene Sequence

<dnaseqindica>225..545#1963..2212#2513..2877#gtagagcacctgcccaccgccctccctctcctcctcctcgactactagaacccaaagaggagcacgaatccgcctccttcaatcccctcaaaaaccctcgttaacccccgcatcgatctcgccggcagatcgcggaactcgcaaagatcggcggcttttcttttcttttctttttcttgcagcaaagatcggattttctgtctcttttcatcgggaggagatagatggcggggggaggcagcaggaggggcgcggcggcggcggcggaggaggcgaggatcggcaccagcaacgtgttcgcggcgctcgacacgctcaagaggaggaagaagccgtcgtcgtcgtcgaagaagcacgcggagaaggagaaggaggtgctgtgggcccccgcgccgctcaccaccaggtcctgggccgacgtcgaggacgacgacgacgacgactacttcgccaccaccgcgccgccgcgccccgtctgggggacacaccaccacgccgctgacgcccacgacgacgaccacgacgagcaagctgcccttgaacaggtttactcacttgcctccccttctatgcctactttcatttatttatattaatataatatatgtgtgagatttcatatttgtgtatgctttgcctgaacaatcgaattcgacaccatctgaaatttatggataaaggcccccttttttaagcctattgatgcgtgtgtgtgatttatgcgtgtttgttgttattggtcacttgtgaattatacatggaacgttgtttcgttatttgcgcaattataaattatgaatgctagacttgggaactatgctttttgtggacatgtggtcttggagaccacaggagaaagttttcccagtaggagatgccgcttgtagtacggtattcgtgtgcgtggcattgtggataaggttcacagatcaacgcacatgccgagccaaattagttagccccttttttcagatacttgaatgttgcaaatatgcgttgtggatttatggctatgataaattggtttattaggctgtctgaatgacacgtgcatcgacttgttcgtatgttgcaatttattcggttacaatatgtagcatgatcgtggaagctatttaaagctatattgaataataagttacaaaattttcaccatattaggataattggttagggctccagcagtgccagagtcccacatggaagagtatcaatgctagtgtccttggacagttgagtatatgtcgtcgacagattgggattctggcattactggcgtctccctatttcgatatatcctgctgagataacatatgcacttttgggcttttcattgttcatattatcggttgtgaagaagcatctagtcatattttaattcaaaattattcttagattctatctcctttttctagatttggtatccttgtcatttttgtcactccataaatctagttagtatccttcctgccttctatcagaagaaaacaaggtcacccaattattgctatcagttagctttgctcatgtgcaacatcagacattgtgtgcactgttcgcttctgttgtgaatggcatcttgtatcagtgtttcagtctgaatttttctgcatgatttattttttgtatgtaatattatgcaaatgttaaaaggcttagtaatgacaccatagaccatacctctgtgagagtctgatgtcggaagtatattattgtggatttatgagccatgcctattttttgccatagttccttgacctgtatttttagctgtcataccttttccatgttagctatttaactttcacagcctttctgtgtactccatgaaaagctgagtggtacaaagaaagtaatttctctaaagaaaatgccagttcattttgagaactattctaggtgccgttgtattatgtagttttcttaagtgttaactccctagattcctctcatgcactgcaggaacttgaaagtgaagatgaggaggttgatgatgatgctgaggatgaacacgaacatgaaacagaggatgctacccctgctgaacctgcaatgaataaagctgcagctcctcctgcaccaccgaaagatactgaaagacaactctccaagaaggagttaaagaaaaaggaactggaagagcttgatgctattttggctgagttggaactttctagcaaatcaaacaatgatgctcaaaatgaaacaaacggtaagttctaatctgttttgttctttatcactaagttatccttcttcattggcagttactgcattcgttcaattttttatgagttgccttcttggcggaggcatgcctagggcagttagggcttcagccctaggcttgcctccaaaatcatgttgaaatcctcttaaatcaccatgtaaattttggagaaaatgaacaactcattagggcttagccctactcttgtttgataatttctggctccgacactgttctgttgttgaagattgtaatatcaaactttttgtatgtatctttcaggcaagaaaggtgcagagcaagctgctgatggagagaataaagaaggtgcacctgcccctgcagagagcaagagctcaaagaagaagaaagctaagaaagacaagtctgcaaaggaggcgaaagaaacacaggaacttaatggtggggtggaagaagctgctggtgctgagcctgatgaagaggtagcttctatggatgtcaaggatcgtataaagaaggtagcctcaatgaagaaaaagaagtcaagcaaagagatggacacagcagcaaagattgctgcatctgaggccgcagcaaggagcgcgaagcttgcagctgcgaagaagaaagagaagagccattacaaccagcagcctgtgcggtgaattactgcccagattttggatgtcgaaaactcctaatacaatccttgttcgctctggactcacaatagacaatgttggtccactgtacttatgttgacttggggttgtaggaggttccttctgaactgttcatcacaggaaaccttttgaatcttgattacatgcaaaaatacagt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0179800, RefSeq:Os05g0179800