Os09g0532900

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0532900| Description = Myb, DNA-binding domain containing protein| Version = NM_001070300.1 GI:115480342 GeneID:4347679| Length = 4375 bp| ...")
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Gene Name

Os09g0532900

Description

Myb, DNA-binding domain containing protein

Version

NM_001070300.1 GI:115480342 GeneID:4347679

Length

4375 bp

Definition

Oryza sativa Japonica Group Os09g0532900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21747076..21751450

Sequence Coding Region

21747478..21748072,21751002..21751264

Expression

GEO Profiles:Os09g0532900

Genome Context

<gbrowseImage1> name=NC_008402:21747076..21751450 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21747076..21751450 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggcagccgtgctgcgacaagctgggggtgaagagggggccgtggacggcggaggaggacaagaagctgatgagcttcatcctgaccaacggccattgctgctggcgcgccgtgccgaagctcgccgggctgctccgctgcggcaagagctgccgcctccggtggacaaactacctccgccccgacctcaagcgcggcctcctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaacagatggtccaagattgctgccaagctaccgggcaggacggacaacgagatcaagaaccactggaacacgcacatcaagaagaagctcatcaagatgggcatcgacccggtgacgcacgagcccctcgaccggaagcaggagagcccggccaccacctcgcagtccaccgtcacggcggagtcgtccaagtccggcgaggcgaccaggcagcaaagccggcagcttgacgacgccgtcgtcagggacatgtccgtgtctgccggtggcgacagcccgccggagtcgagcactaacaccgccagcaccgccggtggcagtagcagcagcagcagtagccatcaccaggaccctctggtgaagtggctgctggaagaggacctgctgcccaccggtgacgagccatggctcaatttcacggccagcaacgacgtcgacgagttcagtagcatcgccgccaccggcgccacgccggcgctgccgtgggacgtcggcatgacgacggactggctgctcgactaccaagattttgggatgggagactcgagcttggtggtcgatgcctccatggtcaacagctcaaatgggtccaacttctag</cdnaseq>

Protein Sequence

<aaseq>MGRQPCCDKLGVKRGPWTAEEDKKLMSFILTNGHCCWRAVPKLA GLLRCGKSCRLRWTNYLRPDLKRGLLTDAEEQLVIDLHAKLGNRWSKIAAKLPGRTDN EIKNHWNTHIKKKLIKMGIDPVTHEPLDRKQESPATTSQSTVTAESSKSGEATRQQSR QLDDAVVRDMSVSAGGDSPPESSTNTASTAGGSSSSSSSHHQDPLVKWLLEEDLLPTG DEPWLNFTASNDVDEFSSIAATGATPALPWDVGMTTDWLLDYQDFGMGDSSLVVDASM VNSSNGSNF</aaseq>

Gene Sequence

<dnaseqindica>3379..3973#187..449#gcagttgcgaggcacttgtcacgcccccaccccctttgctttgatgcacgcctagctaatcaattaacttaacctgcctcgcctctgcctattcgaaacagcagcggctccagctcgccgtggtcgactttcccggcggcgatcaccggcagcggaggaggagcagtacgtgtgtatatataaaggatggggaggcagccgtgctgcgacaagctgggggtgaagagggggccgtggacggcggaggaggacaagaagctgatgagcttcatcctgaccaacggccattgctgctggcgcgccgtgccgaagctcgccgggctgctccgctgcggcaagagctgccgcctccggtggacaaactacctccgccccgacctcaagcgcggcctcctcaccgacgccgaggagcagctcgtcatcgacctccacgccaagctcggcaacaggtacccccttctccatgcatatacacacacctacgttacttgctctacctcgtctagcccacacacgcaaatgcatgcatacaaacgctaatagatttttcatgcatatgcactgtgccatcttaaaccatataggattttcttttgccgggtaaccatataggattttgatgtggatagagctggattaactctctatacaaataggagtagatcattaaaaagctcagtagtactagcagtttgatagcggtaataactaacaccgtatagtaatttaataaggtccaagaaattgagagaactactactagtactgtatgttagctacctgcatgcccattatttgatacgaagacgactgacgacatgtgtggctgtcatcaatgtgtgaggtcgcaaagccaccaaattacagtactttgacaatgaagctcataggtcgtcaatcactcatgtgaactaattaaataagtgtatatagcgcttacatgtacgtgacatcacggtcacgtaggtacgtaaaccttcatcactactactactgctgtcatacgcaagctagcagacttgtctccatgtgtactacgtcgccaagaaagtatcttacccagtatacgatgaagtaattaatcccatggattagcgcgtaggtacgttccttgtcaacacacaggatcaaacgtacgaattactgtccactggttggtaaaaccatggaagaaaactccctaatgtaaccatcacaggttagcagccaaattaagggtagactctggcctctaactcgcatgcatttcatgtcgctgtctaaggtgtggattacttgtttcttgctttgaaggagacaaaacatagcttggaatatttagcagtagcacatagtaaccctacttgcacgagaaatccatttaagaaacgagactttctacactggtgaaggccggccagtcagaatctagaactttcgatcgccatgcatagatataacgtggagaagacagaatggaaaaccttatctagaatcacactattttctatctatctttgttttgtatgatccaaaccaaacacgaggttagcacgtatgcattttctttatagcaaaagttaattatatgccagctatctgataggaaaaactagaagtgtgcaaaacgacgataattgtagttgcgcactgttgacctagctagcttgcttttgttaatttaaacccaaagaacaatattgtaagcccaacagttaatttaaacccaaagaacaatattgtaaagaaaatacaagtgactggccgcttgcaattcattcattgtttagattctttattagaagaatctgatgagttatatattagatagtagaagctatttattggagtttgaacagcacttgattccatcatgtaatgctcttaagaaaaattaagcacacaattcttcaatcaactaaaatggaaatttaataaataatctaatttggagcaaaaaaataataatataattacttccagatttgtaaagtttttttttaaaaaagatagcaccacactggtaggagaagcatatgacatgctggtgacctattgccatagtacgaggaaacatcaaacaacacatgcgtgtattagtttctcaatgatggaggggagatgtacaagattagccaagtatgaacatgcttaattgtggtccctgttatggagaattaattaagtgcctacttttacttttggcagaagatagctaatttttgtgcaaatcactgtcgtaccaactgataccgatattttgaaaaaaaatgtagaagaaacaaaaggactgtactacacaatgagatccacaatattttctttctccaaatttaatgttacttatttattgttttgatttttttatgtcaacactgaattaattatgggtttacacatattagatatgctccttgtaaactagagagtagcataaaagcctttctatgacagctcttagacacaaccgctgaactctatatccttagctgttatatggtgtccaagtggcatacaatttcgtagccatggaaaatagtctcgcagaagaacattggaaatttcttgtttcactttcttgatgtgcattctagagcgctggctcccactagcttgatttctgtggctaagagaaccctacacgttgattcagaaatagaaagcatcctcttaggtccagttgcctcattggaaaatggaagaaagctttttaaaaagtacactaccaacccctttgttgttttgtcactcttaattaaaaggctactccttagatagcttaaagaaacaaatgagatagagatgggttgtgatctctagttaattgagagttgcgcttcaaatcagtaaaatatttctatttgcttatgaaagtggtggcatgttttcacggctatgtaaaaacttgcataagaaatgctcctaggcagtaaattatggagaaagtaaagtttggtcagtcatcatacttccatgtctccctcaaactctaatgattaacagaacaggcatctgcaccatttattccatggtgtagaaatggtaattccatgcggtttcaatgtttcatcagcaagccggggtacctgcgaaaatgattgacaaggatgaattgctttttttatttctatctatcttttagaaatataattaaaagtgaatgcatagcgcacccggctgaaatcaccaactggtttctccatccaaattaactactgttacgaaattgacattattccttttttttcagtcgtgtgctacgtaaacattcccatcagtaaataattttcattcttacttaagcatgcacgtatgcatgatgtctccgtgagaattactactagtacaaacttaatcactactacttttctattgttgatgttaattgtgtctatgcagatggtccaagattgctgccaagctaccgggcaggacggacaacgagatcaagaaccactggaacacgcacatcaagaagaagctcatcaagatgggcatcgacccggtgacgcacgagcccctcgaccggaagcaggagagcccggccaccacctcgcagtccaccgtcacggcggagtcgtccaagtccggcgaggcgaccaggcagcaaagccggcagcttgacgacgccgtcgtcagggacatgtccgtgtctgccggtggcgacagcccgccggagtcgagcactaacaccgccagcaccgccggtggcagtagcagcagcagcagtagccatcaccaggaccctctggtgaagtggctgctggaagaggacctgctgcccaccggtgacgagccatggctcaatttcacggccagcaacgacgtcgacgagttcagtagcatcgccgccaccggcgccacgccggcgctgccgtgggacgtcggcatgacgacggactggctgctcgactaccaagattttgggatgggagactcgagcttggtggtcgatgcctccatggtcaacagctcaaatgggtccaacttctagctagaagatgtcagcagcttacttaattgtgttgctatcagtgtagataatcaagtgaagtgtataattaataaaagcatcaagattgtgaaagcagctaggcatggccggccaagatcggagggtgatcacaagtcgaggcctttgctcttcggaaaaccaatcaacggttgggattgatgcatttgagagagggtatgcgtagatggtgcatgttgttgtgtattttccccttgagattgattcgggggtttgtgccattaactagaagtgttattacttctcaaatggagatacttagatctttgttttttttttggagagatagaactatttgttggtgtagtacctatacatgttttcaataaaagatgtgggtgggtaatgtacaataatattagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0532900, RefSeq:Os09g0532900