Os05g0180500

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0180500| Description = Conserved hypothetical protein| Version = NM_001061344.2 GI:297603950 GeneID:4337981| Length = 2761 bp| Definition ...")
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Gene Name

Os05g0180500

Description

Conserved hypothetical protein

Version

NM_001061344.2 GI:297603950 GeneID:4337981

Length

2761 bp

Definition

Oryza sativa Japonica Group Os05g0180500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4819270..4822030

Sequence Coding Region

4819270..4820121,4821968..4822030

Expression

GEO Profiles:Os05g0180500

Genome Context

<gbrowseImage1> name=NC_008398:4819270..4822030 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4819270..4822030 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgctactggtttgatctaacacatcacgcacctattaacggctatatgaccccattgaaggggatcgaggaggagacgatgctgaggagggtggcggtggcgccgcccgacgccggggacgcggcggacgggaagccccggggcggcgcggcggcgctcttcaaggtgccgcggctgctggtggggatggcggcggcggcggcggcggcgaggccgtgcgagtgcgactcgccggtgcgcagcccgacgtcgccgctcgacctcagggccttcgccgcgcccccgcttctccggtcgccgcggagttgggacgcgcggcgggccgggctcggcggcctcatcgacgacggcctcgccgagccgcccggcgccgccgccatgagccgcctcctcatgccccagatgcgcccgaccaagccgagaccctgcggccccgcgcagcctgagctcgggaacgccgtgggcgccgccgccggcatgtcggtgccgtgcagcagcaggttctacggggatgtgaagtctggtccagaggtcaccgtcgccggcgccgctcagctccgcgtgaacggcggtgtccacgccgccgctgccgatcttggcaagttcccggcgaccggctcgctgccggcgtcgatcgggcgcccgctgccgcagtacatcgggtcagtgtcggcgacggaggtggagcaatcggaggactacacccgcatcatcgctcgcggacccaatccgaagacgacacacatttttggggattgcatcttggagccctgcaccgagtcctactggctggtgaagctgtccggctccggcgacgagctccgccgcctctgctcgtcctgcaagaagctggatggcagtgacctctgcttttatcggtatattgatgcagctaccacaatcatcttatga</cdnaseq>

Protein Sequence

<aaseq>MCYWFDLTHHAPINGYMTPLKGIEEETMLRRVAVAPPDAGDAAD GKPRGGAAALFKVPRLLVGMAAAAAAARPCECDSPVRSPTSPLDLRAFAAPPLLRSPR SWDARRAGLGGLIDDGLAEPPGAAAMSRLLMPQMRPTKPRPCGPAQPELGNAVGAAAG MSVPCSSRFYGDVKSGPEVTVAGAAQLRVNGGVHAAAADLGKFPATGSLPASIGRPLP QYIGSVSATEVEQSEDYTRIIARGPNPKTTHIFGDCILEPCTESYWLVKLSGSGDELR RLCSSCKKLDGSDLCFYRYIDAATTIIL</aaseq>

Gene Sequence

<dnaseqindica>1910..2761#1..63#atgtgctactggtttgatctaacacatcacgcacctattaacggctatatgaccccattgaaggtactctctccgtcctattttaagtgcaatcataaattttcacgatcaactttaatcgtttgtcttatttaaattttttttcgtaattagtattttttttttgttgttatgagatgataaaatataaataatactttatgcgtgacttatatttttattttttttaaagaaaaatttaaataacatgaacggttaaaatagggcacgaaaactcgtaaaccacgttcaggacgtgagctgcaacaaacggtaggatggagctctcggtactcctaggtgacggcaaaatcgccgtgctaccctgacaagtgggaaccacctgccaacgtaccagcttggtatgtgtcagtgagtaccatcacaatgtatttgtaccgcaaaaccagccgtatagtatatacgtaggctgtatttagatctaaagtttggatctaaacttcagtcctttttcatcacatcaacatgtcatacacacacaacttttcagtcacatcatctccaatttcaactaaaatccaaactttgcgttaaaactgaacacagccgtatccacactcgtatcccatactccctccgtcccaaaaaagacaaaccctggattttcgtgtccaactttgactgtccgtcttatatgattttttttataattcgtattttcattgttgttagatgataaaacatgattaatattttatgagtgacttgtctttttaattttttttataatttttttaaataagatggacggtcgggcacgaaaaccagtatgtatctcgaggcagctactcctactccgcgctacgcgtcgcctacctcctctgcctccgctctgacacccatgaatgatacgatccgtagtgagagagagagagaggaggagtacttcagaagcaaccgggttgtgtttacttcatcgtaaagtttggattttggttaaaattgaagatgatgtaactaaaaaattatgaccctgtttaaatggactaaaacttttaagttcctattacatcggatgtttgacactaattataaatattaaacgtagactattaataaaacctatccataatcttggactaattcgcgagacgaatctattgagcctaattaatccatgattagcttatgtgatgctatagtaaacattttctaattatgaattaattaggcttaaaaaaattgtctctcaaattagctttcatttatgtaattagttttgtaagtagtctatgtttaatactctaaattagtgtctaaatacagagactaaaattaagtccctggatccagacaccacctatatgtgtacgacagattgatgtgatggaaaatgatccatcacagcccaaaggaaagcaaaaccccgagctctgcactgccactgcacactgcaccctgctcttaacccgtcacctcactgcgccgagctagctagtgatagatgagctcattgttgagctgctcttcttgattgctttgccgccattgcacaccggtggccgagaagctagcagcagtaacaaagacgagaggttgatcttcatcttcatcttcatcaggtgggggttgcgctttgttcttgtcttgtttgggggggagagattgagattccgcggggatgaggttttatctctatccgatgatcgtgccgtcgcccatccatggcgatttgtctcgttgcgccgcctccctccgacgagctcgacctgttcttggatcgtagctaaagaatactggaattttctttttctttttcttttttcttttttttggggggtttcttgcggctgcgttgatccatcaatcgattggttgcttgatcttggttggcggcgcggcgttgcaggggatcgaggaggagacgatgctgaggagggtggcggtggcgccgcccgacgccggggacgcggcggacgggaagccccggggcggcgcggcggcgctcttcaaggtgccgcggctgctggtggggatggcggcggcggcggcggcggcgaggccgtgcgagtgcgactcgccggtgcgcagcccgacgtcgccgctcgacctcagggccttcgccgcgcccccgcttctccggtcgccgcggagttgggacgcgcggcgggccgggctcggcggcctcatcgacgacggcctcgccgagccgcccggcgccgccgccatgagccgcctcctcatgccccagatgcgcccgaccaagccgagaccctgcggccccgcgcagcctgagctcgggaacgccgtgggcgccgccgccggcatgtcggtgccgtgcagcagcaggttctacggggatgtgaagtctggtccagaggtcaccgtcgccggcgccgctcagctccgcgtgaacggcggtgtccacgccgccgctgccgatcttggcaagttcccggcgaccggctcgctgccggcgtcgatcgggcgcccgctgccgcagtacatcgggtcagtgtcggcgacggaggtggagcaatcggaggactacacccgcatcatcgctcgcggacccaatccgaagacgacacacatttttggggattgcatcttggagccctgcaccgagtcctactggctggtgaagctgtccggctccggcgacgagctccgccgcctctgctcgtcctgcaagaagctggatggcagtgacctctgcttttatcggtatattgatgcagctaccacaatcatcttatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0180500, RefSeq:Os05g0180500