Os04g0437600

From RiceWiki
Revision as of 19:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0437600

Description

Protein kinase domain containing protein

Version

NM_001059394.1 GI:115458517 GeneID:4335914

Length

5962 bp

Definition

Oryza sativa Japonica Group Os04g0437600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21774835..21780796

Sequence Coding Region

21775173..21775428,21775506..21775615,21776278..21776511,21776586..21776693,21776786..21776845
,21777425..21777500,21777586..21777746,21778361..21778423,21778533..21778620
,21778938..21779468,21780220..21780659

Expression

GEO Profiles:Os04g0437600

Genome Context

<gbrowseImage1> name=NC_008397:21774835..21780796 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21774835..21780796 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgcgtggtggccacggaagtcgaggtcgaaggcgaagggcgtggggaagccccccggggcaggggcggcctccgcggcgtcgtccccgcgcaagtcgctcgacctcgttgacctctccgcctccccctcggtgaccccccgggcgagggagaaggcgcgcagcctcgactcgccgtcggccgccgcgccgcggcatgggggcgggcggtgtggtggggggttcggggaggtcgggtacaagctccccgtgcccgtgggtgacgcggggccgggggggcaggggcaggggcaggagccggagttggagccggctcctgtaaggttcgaggagaacggggatgtggtgggcggcgtcgccggcgacgcctcgtcggaggagttgagcgtgtgctcgcatgattcgtcggacgaggcgacggatcagcaagtatgtaggtctacggatccggcgtcttttgtcaggggaagaaatatgccatctgactcacataagatcctaaatgaagacaatcatttcatgtcctatagcatgccacgggagcatcggaagttcttcgaggttcctgtcactaatatgggagaacttcatttgcattgtgatgatctgtcaactagcgaaactagttcacgtggcagaatgttgcccgaggattttcttgctccaagaacaagaagcctctcccctggaccgaaaggccatacttttgctgtaaataatgtaaattcaagggaatttggttttagtccaaggtcaccagtaaaaatgatggatggattgaagagcccacctcatcctttacctcttcctccaggtcctgctacttgttcacctcttcccccatctcccactgcttactcgcctcaccctctaggtcccactacttgcttgcaatccgaatcacaatggaaaaaaggcaaattgttagggagcggtacatttggccaggtttaccttggatttaacagtgaaaatgggcagttctgtgcgattaaggaggtccaagttatttcggatgatccacattcaaaagaacgactcaagcaattgaatcaggaaatagatatgcttaggcaactttcgcacccaaacattgtgcagtactatggaagtgagatgactgatgatgcactttcaatttatctggagtttgtttctgggggctcaattcataaattacttagagagtatggtccttttaaggaacctgtgatccgtaattacactggacaaattctctctggtcttgcctacttgcatgggaggaacactgtccacagagatattaaaggtgctaacatacttgtcggccctaatggtgaagtcaaacttgctgactttggcatggctaagcatatatcatcttttgctgaaatacgctctttcaaaggaagtccttactggatggctcctgaggttataatgaacggtagaggttaccatctaccagttgacatttggagtttgggatgtactattattgaaatggcaacggcaaaacctccttggcataaatacgagggggtagctgctatatttaagatcgcaaacagtaaagagatacctgaaatcccagacagcttttctgaggaaggaaaaagcttcttgcagatgtgcttaaaacgtgatcctgcatctcgcttcactgcaactcagttgatggatcacccttttgttcaggaccatccagcagtaagagctgcgaaatctggtgcactgagaaatgcgtttgcaccagcagatgggacgcatacaacgtccaacagggagttctcaaggaaaagtatcactcccctaaaggatataggagtgagtgcaagagattttaccggattttccacagccgttccttcaccacacaccgccagtcctatttccgttgtgagaacaaacatgtctctaccggtgtccccatgctcaagcccattgcggcagtttaagcaatccaactggagctgcctgccatccccaccacacccaacattttccaatggtgctacttcctataatctatcaagctacatgatgaacgagacaagacgaattcccacgatttcggatacctggcaggatatcagccagttgaaggtccaaagcccctacggctccccaaagaggttctga</cdnaseq>

Protein Sequence

<aaseq>MPAWWPRKSRSKAKGVGKPPGAGAASAASSPRKSLDLVDLSASP SVTPRAREKARSLDSPSAAAPRHGGGRCGGGFGEVGYKLPVPVGDAGPGGQGQGQEPE LEPAPVRFEENGDVVGGVAGDASSEELSVCSHDSSDEATDQQVCRSTDPASFVRGRNM PSDSHKILNEDNHFMSYSMPREHRKFFEVPVTNMGELHLHCDDLSTSETSSRGRMLPE DFLAPRTRSLSPGPKGHTFAVNNVNSREFGFSPRSPVKMMDGLKSPPHPLPLPPGPAT CSPLPPSPTAYSPHPLGPTTCLQSESQWKKGKLLGSGTFGQVYLGFNSENGQFCAIKE VQVISDDPHSKERLKQLNQEIDMLRQLSHPNIVQYYGSEMTDDALSIYLEFVSGGSIH KLLREYGPFKEPVIRNYTGQILSGLAYLHGRNTVHRDIKGANILVGPNGEVKLADFGM AKHISSFAEIRSFKGSPYWMAPEVIMNGRGYHLPVDIWSLGCTIIEMATAKPPWHKYE GVAAIFKIANSKEIPEIPDSFSEEGKSFLQMCLKRDPASRFTATQLMDHPFVQDHPAV RAAKSGALRNAFAPADGTHTTSNREFSRKSITPLKDIGVSARDFTGFSTAVPSPHTAS PISVVRTNMSLPVSPCSSPLRQFKQSNWSCLPSPPHPTFSNGATSYNLSSYMMNETRR IPTISDTWQDISQLKVQSPYGSPKRF</aaseq>

Gene Sequence

<dnaseqindica>5369..5624#5182..5291#4286..4519#4104..4211#3952..4011#3297..3372#3051..3211#2374..2436#2177..2264#1329..1859#138..577#tcctcgcgccttcctctctctctctctcctcgcttccccgcgccgccgccgccgccgcctgagctcggcggcagcagggggacgataggtggtgtggtgctttgctccggcgcagcgtgctgctgatcgcgcgcgcgatgcccgcgtggtggccacggaagtcgaggtcgaaggcgaagggcgtggggaagccccccggggcaggggcggcctccgcggcgtcgtccccgcgcaagtcgctcgacctcgttgacctctccgcctccccctcggtgaccccccgggcgagggagaaggcgcgcagcctcgactcgccgtcggccgccgcgccgcggcatgggggcgggcggtgtggtggggggttcggggaggtcgggtacaagctccccgtgcccgtgggtgacgcggggccgggggggcaggggcaggggcaggagccggagttggagccggctcctgtaaggttcgaggagaacggggatgtggtgggcggcgtcgccggcgacgcctcgtcggaggagttgagcgtgtgctcgcatgattcgtcggacgaggcgacggatcagcaagtatgtaggtaagtgtgcgatcgtggaatacctcagcctgttcgatttctatttctcggggggtgcaacgtgcaattccagatatataggtattgtgatcaaaatttggggaatttcatgatctgataagcgtagcatgtaggcttcgtgcgttactttccccactaatttcgtgtgaatggctttactcggctttgctacttgcttttaagtgttcctagtcaagtgcagagttggggacgtgatgaatgaacagtgtggcttcgtaccaactctacaagttgaccttttcccatggtcgtttcagattacttccagttcgggaatcctaagccatttatttttctttctctgctaaatatgtattgcacacaggattactcgggacgctaaggtgtgttaatggttggacaaagaattttaaaaaggctgaatagttgtttcttttgttgccctggagtcaccattctgttgaaacgtgtatttggttcttgtgctaaatcattgacgttctctcaacaataatgtacagtgcttttcgttaatcattatgctctgaacttaatttgacaacttctttgagttggacaatttgagaactttttgaagtatataaattcatatgacgtgcctatgtttaggggtacttaaattagcgtattgttccacagcacattgttacagtatttatatatttcatttcaaaatttgtgttgatataatatctgatgattcttggctgcttggtgtaatttctaggtctacggatccggcgtcttttgtcaggggaagaaatatgccatctgactcacataagatcctaaatgaagacaatcatttcatgtcctatagcatgccacgggagcatcggaagttcttcgaggttcctgtcactaatatgggagaacttcatttgcattgtgatgatctgtcaactagcgaaactagttcacgtggcagaatgttgcccgaggattttcttgctccaagaacaagaagcctctcccctggaccgaaaggccatacttttgctgtaaataatgtaaattcaagggaatttggttttagtccaaggtcaccagtaaaaatgatggatggattgaagagcccacctcatcctttacctcttcctccaggtcctgctacttgttcacctcttcccccatctcccactgcttactcgcctcaccctctaggtcccactacttgcttgcaatccgaatcacaatggaaaaaaggcaaattgttagggagcggtacatttggccaggtttaccttggatttaacaggtattggaatctttctatagtttggcattattgtattttggtattacaattttgtatatgatgcattgattccgcattgaaagcaataatccctcgcggagtatatgataaattttcatattccattatttggggtaatgaactcaacagtgagattaagtggcatcagttattttgctgaattttatggtgccaaggtcttgatatgtacagcaatttgtacaagaatttggtatattctgtgaggttgtggtattacctaaatttgtccaatagcaatttgtggtagcattcttagtttatgatgaatcatgcagtgaaaatgggcagttctgtgcgattaaggaggtccaagttatttcggatgatccacattcaaaagaacgactcaagcaattgaatcaggttatttctcagtttaatcagtatgaatatcttttgatgagtagtaacagcatttgtgtctcttgttcaatggactcactgacatattaattcactcgggcattaacaggaaatagatatgcttaggcaactttcgcacccaaacattgtgcagtactatggaagtgagatggtaagctttacttgataaacaattgcatttatctctgtgcaactatatataacttcaatacatgtttgtaactaccatgttgtctgttacatgcatgacttgtgatgtaactgacgtatgaagattacaaaaaaaagcctgtgtcttaaagcaaaatgattattgtgatgactagagccagatccagataattaacagcatttagtttggttggttcgcgtttacaaatcactatcctgatcaatgaaacttgcaagaggttgttacatgtataagtgtaagcgtgtctggaaggatgaagaaaacatcagcatttaattgtttattatgtatgagtagtaacgcatttcatttttactttttagtctatcttttgaatttagataattaaattgttcgatttcctgtcacctcttctgctgtgctactaatataagatttttgctgttatttcctctcacttggtttgcattttttacttctttattttccctctcagaagaaaattctctggttttcttgtttagttctcatcttttgttcgaagcacttcagaaagtagaaagtactttgtgttgcttatactttctaattctgtatgtttttccatgcagactgatgatgcactttcaatttatctggagtttgtttctgggggctcaattcataaattacttagagagtatggtccttttaaggaacctgtgatccgtaattacactggacaaattctctctggtcttgcctacttgcatgggaggaacactgtccacaggtagtacagattatccacagttgttttacattcctttggtagtaaaagaaataccttaaccacttcatcctgtttctcttcgcagagatattaaaggtgctaacatacttgtcggccctaatggtgaagtcaaacttgctgactttggcatggctaagcatgtatgcattttttttttcttttccatcccctgacctgtgtgtgcagcatcatgtagtcttatcgtcttaaaatttggtcgcaacatcccttttggttcaatacctttaacattgaaatgttgccaatgcatcttataataattctaaaagagaaatgttttcctaaaagataactttgttgtttctaaatgctgctgaatttatctgtcgggtttaatttcttaagcatccatgttgtttcctttttgggaaggcatagaagcacattccaattccatttccttcatgaagctacatttaatttacttctccttactcataagtagaaaaggattctgtggaagtttgaagatagttgatatctattcccagatgataagtttgatggttgtctggttgatgtgttttgcgttagtacatgcacatatatctacagaagttttcgggtccttttgatgtctattattgctagttcacgactacaagagaatatacacaatactactgtagcttgtatccccccccccccccacccctcctcttttaagcctttaatttcattacttacgtttgacacagatatcatcttttgctgaaatacgctctttcaaaggaagtccttactggatggctcctgaggtaaattgtttttctaacagtaaacctttatataccgtatttatcatcatctttatatgattctgaattctcctaatgattgtaacatgcaggttataatgaacggtagaggttaccatctaccagttgacatttggagtttgggatgtactattattgaaatggcaacggcaaaacctccttggcataaatacgagggggtatgctttcactttgtagctatagttttccaagtaacttgtgaatgccaagctgatccaatctgatcttgcaggtagctgctatatttaagatcgcaaacagtaaagagatacctgaaatcccagacagcttttctgaggaaggaaaaagcttcttgcagatgtgcttaaaacgtgatcctgcatctcgcttcactgcaactcagttgatggatcacccttttgttcaggaccatccagcagtaagagctgcgaaatctggtgcactgagaaatgcgtttgcaccagcagatgggacgcatacaacggtatacttttatatttatcattctgaattcagctttccgtaggcctttattctcatgggccctttccaaagtccaatgagaaaagcagccacagcacactgggttgagtactttacatgcgcataaaccactttggccaataaatggtaccacctccaccccagaatataacaatttctagctatgaatctggacaagtgtttttccagattcatagctaaaacttgctacctcctccgtttcacaatgtaagactttttagcattgctcatattcatatagatgttaataaatgtagacatattcgtatgtctagattcattaatatttatatgaatatgagtaatgctagaaaatcttacattatgaaacggagggagtatattttaggggcggagggagtagccttcttttcgttttctggccagtgcttttacattcttcctcagttgcactggcttagtcaaagatccttttgagtatgtctagttaaaattgtaagctgatggagcaagggccccttttgctactttatttgaatggagttcgatgtagtattgttggcttttaagggggaaaatggcattgcttgcttcttttatggtttctattttcctgaatcctgagtcctgacgcttatcatgtcttcatccttgttgcagtccaacagggagttctcaaggaaaagtatcactcccctaaaggatataggagtgagtgcaagagattttaccggattttccacagccgttccttcaccacacaccgccaggtactgtgattcttgcatttatcctcactttgtactctctttcaacttgttgatgcttatgtattatcctacagcagtcctatttccgttgtgagaacaaacatgtctctaccggtgtccccatgctcaagcccattgcggcagtttaagcaatccaactggagctgcctgccatccccaccacacccaacattttccaatggtgctacttcctataatctatcaagctacatgatgaacgagacaagacgaattcccacgatttcggatacctggcaggatatcagccagttgaaggtccaaagcccctacggctccccaaagaggttctgagcgtcagtcatccatgagtgctgatgaatgttcagcaggagaattgttcccatgacatcgtagatatataatgttagagatgtcagcaacatgtcgtaactctgttactacaccgatctgattttactgtacagtatagaaaggctccacgaggaaagaggctgttgacaagagaggaatttctgtatatctgtaggcggttgtcgcctccactttgtattatgctgtactatatcagtacataaaaatacggcctgtaaattcgctagcttggagaagctgacgtttggatgatgtagttagtttagcgcttccctagcagatgtaaggatttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0437600, RefSeq:Os04g0437600