Os04g0449500

From RiceWiki
Revision as of 19:53, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0449500

Description

Conserved hypothetical protein

Version

NM_001059467.1 GI:115458663 GeneID:4335990

Length

5270 bp

Definition

Oryza sativa Japonica Group Os04g0449500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22795060..22800329

Sequence Coding Region

22795368..22795536,22796211..22796656,22797758..22797932,22798012..22798118,22798236..22798524
,22798820..22798953,22799106..22799301,22799489..22799597,22799717..22799843

Expression

GEO Profiles:Os04g0449500

Genome Context

<gbrowseImage1> name=NC_008397:22795060..22800329 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22795060..22800329 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaaggtgaaggcgtgggcgggggccaactacgcggagcccatggggtcggtggagcagtcgctgcgcgtcgcgtacgtggtcctctccttctgcgccgccttcttcctcggcggcatcaaagcggcggtcgtcggcccggtggcggcggcgctgatggtgctgggcaacgtcggcgtgatactcctcctcttcccggcgcacgtctggtggaccatttactccctcatcaagactgaacgcatcaacgccggcctgaaactagcggtgctcatcgcgctgccggtgctgttcggcctctggctggggctgggcatcttcgggagcgcgctggtcgccctcggctatggcttcttcacgccgtggatcgccaccttcgaggcgttcaggcaggagagcgagtccaagaagttcgtgcatggcgtcgtggacgggacgtgggggacgattaaaggcagctgcacggtggttagggactttgcggatttatgcttccactcgtatcctgtttatctgaaggagctgcgcgaaagctcgcagaattgcgagccccattccatcagggtgttggatgtgccctcatgtatagctgttggtctcttgggattaatcgttgacattccgctctacaccgtaattgcgctgataaagagcccctatatgctcttcaaaggttggcagaggctgcttcatgaccttataagccgcgaaggtccattccttgagacagtttgtgtgccgatcgctggcctggctatccttttctggcctctggtggttgttgggagtgtcctactagctatcgtctcgagcatttttgtgggtctctacggagcagtcgttgtctaccaggagaagtcgttccagaggggagtttcttatgtggttgccatggttgcggaatttgacgagtacaccaatgactggctttatctccgggaagggacagttcttccgaagccttcctaccgtaagagaaaatcgtccagttccacggagttttcagtcagaacgaatgcttctgttaaaggaggcgaccaacctagttccaatgaagctccagcaatgctggttccaactttggccccagcaaggtcagttagagaggccatacaggaagtcaaaatggtccagatatgggaaaatatgatgaagaattgtgaactgaggggcagggatcttctgaatttaaacgtcataacaactgttgatcttactgaatggttacgaacaaaggaaagtgggcatgaagcaataggactgggagtaccttcttattctctgctgtgtatgatcctccattcgatcaaggccggttctggagggctattgataggcaatggcatcgaaatcaatcaatataaccgcccccaagatcggttgatagactggttcttgcaccctgtgctggtgctgaaagatcaaatacaagcgctgaaaatgacggaggaagaagtgaggttcttggagaagctgacccttttcattggtaattctgagagggcaaatgggtgggataatggtgctgaaatcccccaagatcctgtaagggcaggacagatccaggccatcagtagaaggttggttggaattgtaaggagcatgtcaaagtttcctacgtacaggaggagacacaggcacgtcatgaaactgctcgtcacgtactccgtcgagaaggaagggtcgttcagatcatccgcgtcgaatcgatcagtacctatctttgagataacgcaattggaagtgtaa</cdnaseq>

Protein Sequence

<aaseq>MDKVKAWAGANYAEPMGSVEQSLRVAYVVLSFCAAFFLGGIKAA VVGPVAAALMVLGNVGVILLLFPAHVWWTIYSLIKTERINAGLKLAVLIALPVLFGLW LGLGIFGSALVALGYGFFTPWIATFEAFRQESESKKFVHGVVDGTWGTIKGSCTVVRD FADLCFHSYPVYLKELRESSQNCEPHSIRVLDVPSCIAVGLLGLIVDIPLYTVIALIK SPYMLFKGWQRLLHDLISREGPFLETVCVPIAGLAILFWPLVVVGSVLLAIVSSIFVG LYGAVVVYQEKSFQRGVSYVVAMVAEFDEYTNDWLYLREGTVLPKPSYRKRKSSSSTE FSVRTNASVKGGDQPSSNEAPAMLVPTLAPARSVREAIQEVKMVQIWENMMKNCELRG RDLLNLNVITTVDLTEWLRTKESGHEAIGLGVPSYSLLCMILHSIKAGSGGLLIGNGI EINQYNRPQDRLIDWFLHPVLVLKDQIQALKMTEEEVRFLEKLTLFIGNSERANGWDN GAEIPQDPVRAGQIQAISRRLVGIVRSMSKFPTYRRRHRHVMKLLVTYSVEKEGSFRS SASNRSVPIFEITQLEV</aaseq>

Gene Sequence

<dnaseqindica>4794..4962#3674..4119#2398..2572#2212..2318#1806..2094#1377..1510#1029..1224#733..841#487..613#ctcgaacacacccttacttctgtccccttctctgagtctgctctgctcgtccccaagaacacgattcagcgacgcgcgcgcaacagtgccgccgcggccgccggcaggtttgacccatccaaagccaacccccaaaccgacgaatcaatcaagaacccccccgaatctaaaatctttctttaagagctctccctcccctggagcggcttctcccgcaagccgctgaatttttccaccaccaccggtcgtcgcggattcccgcgacagccagccagcgaggacgcgcgctttctttttcttctttgtttttccctcgtcctctccgtccggctgcagaaaagcttccatctctctgaagctgtccttgattcttgcggaggtagacaggcaggtgtagtcctttgtgtgcccgtgcgtatatgtgagcgagtgctaccgggcgcgtcgacgccggcgacgaacgaacgatcgattcgattcgactcgatggacaaggtgaaggcgtgggcgggggccaactacgcggagcccatggggtcggtggagcagtcgctgcgcgtcgcgtacgtggtcctctccttctgcgccgccttcttcctcggcggcatcaaaggtgcacgcacgctttccctttcaatcacgtcttggctgctggcgccaccgtgggttcgtcggagttgttgccgccgtgtgcttattttttttcttggttgggatacggttgtggtgcagcggcggtcgtcggcccggtggcggcggcgctgatggtgctgggcaacgtcggcgtgatactcctcctcttcccggcgcacgtctggtggaccatttactccctcatcaagtaagaaaaaagaaaataaaatgtttttatttctttttgatttttgcgtttacttcagttggatacaggaagaaagaattcgagttcttgtttgcgactcgtaatgtttttcgattttttttcttctgtcaatttcgtctataccaaatgatcactgttgatctgttcctctgcattgttaatccaggactgaacgcatcaacgccggcctgaaactagcggtgctcatcgcgctgccggtgctgttcggcctctggctggggctgggcatcttcgggagcgcgctggtcgccctcggctatggcttcttcacgccgtggatcgccaccttcgaggcgttcaggcaggagagcgagtccaagaagttcgtgcatggcgtcgtggtaaggacacgatgccttcttccccttctgaattggagtacaggattaggcaagaacacgagttcaacaagctttgctgcaaatcggcaaggcactgtcgttgttagcgatgtgtccgggcgctcattgagatgatgatttggtttgagcaggacgggacgtgggggacgattaaaggcagctgcacggtggttagggactttgcggatttatgcttccactcgtatcctgtttatctgaaggagctgcgcgaaagctcgcagaattgcgagccccattccatcaggtaattgttatcctactagactagaatgtctctctttggttattcaggaatcagccccatgctgtgtgtaatccatgtgttaagcatggccttgtcatgagaaggactggcacaggaattctgccattaaaaactctgttatagtcatatgccaatcctcatgttagactgttagtacagtctattctggggtgatggtgctgtcacgatcattgcacattacagttgcttgaaattgcgattctcgaatgccgtaaaattcaagctgaatgactgaatttttttttccctgtagggtgttggatgtgccctcatgtatagctgttggtctcttgggattaatcgttgacattccgctctacaccgtaattgcgctgataaagagcccctatatgctcttcaaaggttggcagaggctgcttcatgaccttataagccgcgaaggtccattccttgagacagtttgtgtgccgatcgctggcctggctatccttttctggcctctggtggttgttgggagtgtcctactagctatcgtctcgagcatttttgtgggtctctacggagcagtcgttgtctaccaggttgctgtcttgacatagtgtttgttgtgttgttccaattctttcccatctccttacgtgtctaaacaggaaggagagattaagtgatagtaacttgtgtttatggatctatcgcaggagaagtcgttccagaggggagtttcttatgtggttgccatggttgcggaatttgacgagtacaccaatgactggctttatctccgggaagggacagttcttccgaagtaagttcagactgcctcttttgttgctgaacttctgtgctcacgttgctgattcctcagtgaaaatattttctgctaggccttcctaccgtaagagaaaatcgtccagttccacggagttttcagtcagaacgaatgcttctgttaaaggaggcgaccaacctagttccaatgaagctccagcaatgctggttccaactttggccccagcaaggtcagttagagaggccatacaggaagtcaaaatggtccaggtatgtttcttggacgtgctaaattcttattaattcgacttatttgcacaagaattgccaagggcacatcattaattcattgtacaacaccagccaaggaaaaatggtgttctctctgagcaatttttttgatagttaaacttggtaaaaagtgcattcattcctgtagtaccatcaatatttgccctgcctagaaaggaaaggcatctaatactagttacaacacttgttccttgaaagtatagctagacatttttattggtgcataactgcgtacttgcatcaatgtacttagattaggtgagctagttctaagtgaggtactgctataaatgtgatgatgccatgaaaccacggattgtaaagactactattcttattgggtccatgctctcttagatttggtgaacaggttctaatttaagaaatatcataaatgaaggagatccttgaatattttaattgctgtgtttacgtccttaaattatgtgagctctttttattagaggaaatatttcaaatgaaagtaaccacacgatcatctttttttttggatgatttcatttaattgtgtcagtatcatgacttatcagtgaatggaagcccacaaaagaagcaatggttagtagttagttaccattgcacattgcttgtatggttgaaatgaagcttgacgtgagaattcagaagcatttttccctagagaagtgtgtggtccaacataagcaacagttgaagtgaatatgttataaccgagtatccatctttctatggtggcttatcttggtatatatatcaacaggaaaagcataggaattcctggtttcggaaaaaaaatcaatatatcaacataaagatatttaataagatgatctggaatttgccttctttttactttttagcaagacgcagagacactggcttatgagaaattgagaataatttaggttttgtgttatttatacattttagaaaggatatatgttccaccaatatggatcatgtttaatggtacaaacttacaatccaaacatgctttggttattcattttgattaattaagtcctgcctgaaatcctaacttagctccttgatttgtagatatgggaaaatatgatgaagaattgtgaactgaggggcagggatcttctgaatttaaacgtcataacaactgttgatcttactgaatggttacgaacaaaggaaagtgggcatgaagcaataggactgggagtaccttcttattctctgctgtgtatgatcctccattcgatcaaggccggttctggagggctattgataggcaatggcatcgaaatcaatcaatataaccgcccccaagatcggttgatagactggttcttgcaccctgtgctggtgctgaaagatcaaatacaagcgctgaaaatgacggaggaagaagtgaggttcttggagaagctgacccttttcattggtaattctgagagggcaaatgggtgggataatggtgctgaaatcccccaagatcctgtaagggcaggacagatccaggccatcagtagaaggtaagttgttttctgctacttggttacatacttgcatgtgttatggaaaaagtgttttcattcctcaaaggatctttagtcatatgaatagtcataaaaatttttaaaaaatgacaagatagattaatatgatatgtattactctacaaacatgcattttcaaattcaacatctacaagttgtaacaaatatccccgcaaaaaaaaatgttgtaacttattgtgaatgtgcatatagtagtttcaattgaatttgttccttttggtacaactcatagaaattgaatttaaccttgcatgtttgtggagtgatatatctcatattagtttatcttatatcatgtttttaaatttctgatgagagagtggattttaaactctcgatgggatatcccctcgttgtatagtgatctatcacatattgatcgatcttgttgaactttttcataactatttgagtggcatgtaaacaacgaggagacgtcccctcgagaatttagaatagtttccctttctgataaatatttaggtcacaagtaagaaacgaggggatgtccttttgatggatgaaattaaaatccatctcctgtgttctattgatttcagtagcagtgttattagtgaggttgttctgtccgatccttggaaggttgttctaatgctgttggtttgcaggttggttggaattgtaaggagcatgtcaaagtttcctacgtacaggaggagacacaggcacgtcatgaaactgctcgtcacgtactccgtcgagaaggaagggtcgttcagatcatccgcgtcgaatcgatcagtacctatctttgagataacgcaattggaagtgtaattgaaagttgaaaccatattcagaaatcagagtcagataggtcccttcttcaaatggtcttctttcttcagtaaatatcgcacgccgttttgtcagtgcttgtgtttccccaaatctaggaggttttgtatagctttattttttttacaaggagagagatgcctcactccagaacttctcgctgtgagattcatttgccaaaactgcaggcatgaatgaatcatccattgtacatttgtattgtaaattctgtacatactccttgatcagatcagatacacatgcatgttggttcttttaccttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0449500, RefSeq:Os04g0449500