Os05g0182600
| Gene Name |
Os05g0182600 |
|---|---|
| Description |
Similar to SSRP1 protein |
| Version |
NM_001061355.1 GI:115462440 GeneID:4337994 |
| Length |
5605 bp |
| Definition |
Oryza sativa Japonica Group Os05g0182600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:4946149..4951753 |
| Sequence Coding Region |
4946379..4946432,4947332..4947517,4947622..4947727,4947819..4947955,4948431..4948514 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:4946149..4951753 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:4946149..4951753 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacggacggccaccacttcaacaacatatccctcggcggccgcggcggcaacaaccctggccagtttaaactttattcgggaggacttgcatggaagaggcaaggtggaggaaagaccattgaggttgaaaagtctgatatcacttctgtgacatggatggcaatccccagatcctatcagcttggtgtttcaacaaaggagggcctcttctacaggttctttggcttccgtgaacaggatatcagttcattgactaacttcatggaaaagaacatgagaatcacaccagaggagaagcagctttctgttggtggacataattggggcggaattgaaatcaatggcaatatgcttagctttaatgttggttcaaaggaagcatttgaagtctctctagcagacgtagcacaaactcagatgcaaggaaaaacagatgttgttctggagtttcatgtggatgatactactggtggtaatgagaaagattcattgatggatttaagctttcatgtaccaacttcaaatactcaattccctggagatgagaatcgtccttcagctcaggttttatggcaggctatcttgaataaggctgatgttggctcatcagaggaagctgttgttacatttgatggaattgctattcttactccaagaggtcgatacagtgttgaacttcatctgtcattcttacgactccaaggacaagctaatgatttcaaaattcaatatagcagtattcttcgcctctttgttttaccaaagtcaaataatcctcatacctttgtggttatcactcttgatccaccaattcgcaaaggacagacattatatcctcacattgttattcagtttgaaactgaagcagtcgttcaaagggatctgacattaagtgatgaggttttggctgaaaagtacaaggatagactggagaactcttaccagggtctgatacatgaagtgttctccaaggtccttcgtggcctatctggtgctaaagttacgaggccaagcacgttccgcagttgtcaagatggatatgcagtgaaatcatcactcaaagctgaagatggattgctctatccgctggagaagggcttcttctttctaccaaagcccccaacactcattctgcatgaggagattgagtatgttgaatttgagcgacatggtgctgggggtgctagtatctcatctcactattttgatctcctggtcaagctgaaaaatgatcaagaacatctattcagaaatatccaaagaaatgaataccataatctcttcaatttcatcagtggcaagcatttgaaaatcttgaatcttggagaagctcaaggtagagctggtggcgttacagctgttcttcagagcactgatgatgatgctgttgatcctcatctggagcggatcagaaatcagactggcgatgatgagagtgatgaagaggatgaagattttgtggcggacaaggacgacagtggatctcctactgatgattctggagaggagggttctgacgctagtttaagtggaggagaaaaggagaaatcttccaaaaaggaagctagtagctcaaaggcgcctttgaagaagaggaagccaaagggtggggatgcggcggaaggctcggagaaaagaaagccaaagaaaaagaaggatcctaatgcccctaaaagagcaattgcaccattcatgtacttctcaaaagctgagcgagctaatctgaagaacagcaatccggagctggctaccacagagattgcgaagaagcttggggagaggtggcaaaagatgacagccgaggagaagcagccatacgtcgagcagtctcaagttgacaagaagcgctacgcggaggagtcagccgcctaccgcggggcggctgccatggatgtggactccggccctgcttcggactga</cdnaseq> |
| Protein Sequence |
<aaseq>MTDGHHFNNISLGGRGGNNPGQFKLYSGGLAWKRQGGGKTIEVE KSDITSVTWMAIPRSYQLGVSTKEGLFYRFFGFREQDISSLTNFMEKNMRITPEEKQL SVGGHNWGGIEINGNMLSFNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGGN EKDSLMDLSFHVPTSNTQFPGDENRPSAQVLWQAILNKADVGSSEEAVVTFDGIAILT PRGRYSVELHLSFLRLQGQANDFKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQ TLYPHIVIQFETEAVVQRDLTLSDEVLAEKYKDRLENSYQGLIHEVFSKVLRGLSGAK VTRPSTFRSCQDGYAVKSSLKAEDGLLYPLEKGFFFLPKPPTLILHEEIEYVEFERHG AGGASISSHYFDLLVKLKNDQEHLFRNIQRNEYHNLFNFISGKHLKILNLGEAQGRAG GVTAVLQSTDDDAVDPHLERIRNQTGDDESDEEDEDFVADKDDSGSPTDDSGEEGSDA SLSGGEKEKSSKKEASSSKAPLKKRKPKGGDAAEGSEKRKPKKKKDPNAPKRAIAPFM YFSKAERANLKNSNPELATTEIAKKLGERWQKMTAEEKQPYVEQSQVDKKRYAEESAA YRGAAAMDVDSGPASD</aaseq> |
| Gene Sequence |
<dnaseqindica>231..284#1184..1369#1474..1579#1671..1807#2283..2366#2451..2542#2652..2760#2848..2934#3031..3123#3678..3875#3953..4104#4204..4354#4468..4566#4656..4829#4974..5052#5152..5273#aaaaagccaaagccccacccaaagcggcgacgcccctctctctctctctctctctctcttctcttctcttctctcctccacgtcgcggctcgcgcctccaaatccccccccgcgaggcgagcagggcgaggcggcgaaagcgcgacgcgcgagcggatcgaggcggcggcgtcggtgccggcatccaccgcgtgcataggttgcgtcggcggcggcggaagcggggcgcgatgacggacggccaccacttcaacaacatatccctcggcggccgcggcggcaacgtgagtgctactcgtcgacttggtcgaaaaattcgcttccccctcgtcgaatcttcgcctccgggcttcgtttcgttaggattttgtggcggcgttgtctcgctcccgtggaggcggtttccgcggacgggcttgactaccggaatttgtggcggcgattgattttgtttttttttggtgtggcgggcggttgatttttctagggtttgcgcgctagggtttctgcttggaaggggggaagtcgaaatgaattaggaaaattttggtggatggactcgaatattgtaaggttggctaggcaaaacgaattattctgttgcaaatgcggcggtgaaaagcattgtatggaacaattttggaagttaaattaattgtaaatattcccaaaccctgggtttttgataatctcttcattcaatatcctttcactagtcgaatgtctcatgaaattgctcctaatatctagttggcttgcgtttggcgcacattttagcattcatcctgtggttatttcgtccatcactgcatcaatttatttaatcgcatcttatgtcctacataattatcagtattcttcaattttaaataccatttatcttcaatttgcttgctttgttaaatgatttattcctcttatgatttttttatcacatgcctgaaacaaatcactttttgcagaactaaaaatgttttcatctgttttgttcatgattttttttctggaaatagtggatgcttatgccatttcccattgcaaataggaatatgtatatcaagtttagtctgatatcaacgccaacttttccatcatcattatttgcttgcccactgttagtaacttcccttgtaccttgaggtgctgaaatcttctgctactgttattgtttgggctcttgtagaaccctggccagtttaaactttattcgggaggacttgcatggaagaggcaaggtggaggaaagaccattgaggttgaaaagtctgatatcacttctgtgacatggatggcaatccccagatcctatcagcttggtgtttcaacaaaggagggcctcttctacaggttctttggcttccgtgaacaggtaatacttcctcctgtttttcctaagaaaattaggtcttcccaaacgtgtatgtttctcatagataacttttattgagctaagatttttcttctaatttttaggatatcagttcattgactaacttcatggaaaagaacatgagaatcacaccagaggagaagcagctttctgttggtggacataattggggcggaattgaaatcaatggttagccaaattctctatattattccgttgctccattgcctttctgcaacgtttggtagtttgattgctttccatgttatttccatttcaggcaatatgcttagctttaatgttggttcaaaggaagcatttgaagtctctctagcagacgtagcacaaactcagatgcaaggaaaaacagatgttgttctggagtttcatgtggatgatactactggtggtaatgaggtatgtggtttatccagatatacatttctctgcatccaatttcgcccatattttattagatgctacttttctgtttgttaggtgcaattggttataagtaatcaatttatgtttatcaatctgaagaaatgtggatgtaacaattgtacaagctatctgttacatttcagtgtcatgtattattagctactcaactgtctgccttgtaattaaagagtgattttactgtcctgctttttcattctcatttgatggtattgcaagtaacacactcccattgttagagaaaaaccatttcataaaattttggggtctttatttgtgctgaagggcatattgatcattgttttccaccctactacatattttggagggtctttatttgtgctcagaatattattaaggtagctaagctaatcgttgacaaaaaaaaaggacagctaatttcaacttcctttccttcttttaaatgtagaaagattcattgatggatttaagctttcatgtaccaacttcaaatactcaattccctggagatgagaatcgtccttcagctcaggtgagtttgctcaacaagcatgcaagatggacaacatacacatgattttattgtgcaaatggtgaaatcctctcctttttttaggttttatggcaggctatcttgaataaggctgatgttggctcatcagaggaagctgttgttacatttgatggaattgctattcttactccaaggtgggtaaatcatataaccatagagactagactttttagaaataaggacatcattcaatgttattgttttcaattttctggaatagctaacttctccttttctattcagaggtcgatacagtgttgaacttcatctgtcattcttacgactccaaggacaagctaatgatttcaaaattcaatatagcagtattcttcgcctctttgttttaccaaaggttctgccccttttatatttttattatgctgtacttgttgttaactttgtatctgacaaaaaatcctatgacttttcaccttggcagtcaaataatcctcatacctttgtggttatcactcttgatccaccaattcgcaaaggacagacattatatcctcacattgttattcaggtgttgtattagaattcaatttgatactaacttggttacagtttacggtaaccttccaatatgcatttggtaaccattttctgtatttatgaatagtttgaaactgaagcagtcgttcaaagggatctgacattaagtgatgaggttttggctgaaaagtacaaggatagactggagaactcttaccaggtgatgtattttgtttgcgttcaatcaagtctgacattcttcatctaaaaagtggatcctaattcccggctcatgtagttttgcatttctttctacatctgagcatctgtagaacaaaaaaaaaagtagtttgggggtgtgaatcattttaaataactgcttccagcaatgttatttgttcttgtttgttttagtttcttgtttgtagtcatatgctctgagctgtatttattgtggtaatgtgctgctggatgcttgcaactccaggaatcatcagtgcactgattcccaaacttgtgattcatccgtttatcactgaattgcttgttttttttctatctactcatgactcctgtttgactgaattgcacaagctgctattgatgtgatgaactgcttctgtggcattactgccattgagtctatcattatgtattcctttgtgtttgcaactttgcatgagttatagggtcctatagcttttgctcatttgctatttttaactcctgatagactaataacaaactcacagaaagtatttgatttatctatagggtctgatacatgaagtgttctccaaggtccttcgtggcctatctggtgctaaagttacgaggccaagcacgttccgcagttgtcaagatggatatgcagtgaaatcatcactcaaagctgaagatggattgctctatccgctggagaagggcttcttctttctaccaaagcccccaacactcattctgcatgaggaggtctgttttctacactgctgagatgattgataattccatccatttgtcctgttttaagctgtagctctttatggcagattgagtatgttgaatttgagcgacatggtgctgggggtgctagtatctcatctcactattttgatctcctggtcaagctgaaaaatgatcaagaacatctattcagaaatatccaaagaaatgaataccataatctcttcaatttcatcaggtctgtgctttatttagctgattccaccatcattggtttacttgcctttttgaatagaagtatgaagctgataagtgcctttttgtaatccctttcaagtggcaagcatttgaaaatcttgaatcttggagaagctcaaggtagagctggtggcgttacagctgttcttcagagcactgatgatgatgctgttgatcctcatctggagcggatcagaaatcagactggcgatgatgagagtgatgaagaggtatttcctgcgtttaattgttgatcctacttatcatgattccatgatctgacttatcaatcctgtcatagcttggaattaatttgtttgtatcggataatcttcaacttcaggatgaagattttgtggcggacaaggacgacagtggatctcctactgatgattctggagaggagggttctgacgctagtttaagtggaggagaaaaggaggtaactcattttactcacgcaatatccctgatcagtgtctataatgaatacatcatgctaatcaacattactattccccccctccaaagaaatcttccaaaaaggaagctagtagctcaaaggcgcctttgaagaagaggaagccaaagggtggggatgcggcggaaggctcggagaaaagaaagccaaagaaaaagaaggatcctaatgcccctaaaagagcaattgcaccattcatgtacttctcaaaagctgagcgagctgtaagttcctttccaccctgcactactgtacagaaattccctgactaatcctatgtgaaacattgtgggaggatctctctctctctctctctctcacacacacaagcaaagaagggagcttacgatcgtttttcccaaatgcagaatctgaagaacagcaatccggagctggctaccacagagattgcgaagaagcttggggagaggtggcaaaagatgacaggtaacattctttgatctctatgctcgacaatgtccatgctggtcggtcaagtcctccgagacctccgtttgaaccatgtccgcttcgtgtaacttgcagccgaggagaagcagccatacgtcgagcagtctcaagttgacaagaagcgctacgcggaggagtcagccgcctaccgcggggcggctgccatggatgtggactccggccctgcttcggactgaagagaagagacctgaattgcattccagattacccttagtctaggagggcgacagacaggatacggctagtggcatctctatttccatgtaaataaaacttatgagttatctggatgtaaataaaactatcgtaggtatctttcgagtcccgttctatgagtgtcttatcgctttatcttagctatatatatagatagcagctatagtatagtagagttcttcccgccatttatgctggccggataacttaccttcacctatgtagcagcaataagcatgcttatctgcttagttaaattataaatgcgtgttctagctggagaatcacctct</dnaseqindica> 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