Os05g0182700

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0182700| Description = Protein of unknown function DUF1664 family protein| Version = NM_001061356.1 GI:115462442 GeneID:4337995| Length = 4...")
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Gene Name

Os05g0182700

Description

Protein of unknown function DUF1664 family protein

Version

NM_001061356.1 GI:115462442 GeneID:4337995

Length

4913 bp

Definition

Oryza sativa Japonica Group Os05g0182700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4952326..4957238

Sequence Coding Region

4952474..4952593,4952764..4952844,4953539..4953623,4954037..4954104,4954346..4954447
,4954742..4954831,4955074..4955148,4955224..4955256,4955735..4955809
,4956396..4956446,4956689..4956769

Expression

GEO Profiles:Os05g0182700

Genome Context

<gbrowseImage1> name=NC_008398:4952326..4957238 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4952326..4957238 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggtgcaggccggcatgggcctcacccgcgtcgttgtcctcatcggcgccgggatggccggctccgtcgtcctccgcaacggccgcctctccgagatcctcggcgagctccaggagatactggacaagggggagaaggggaaagacggagaagggggcgggggcgccgacatgacggacgcgctcactagacaggtgcgcaacttggctatggaggttaaacaacttgcttcttcccgtggatctataactgttcttaatggaggttctggtcaaacaggggtgtcaggtttgatagtacctgcagcaactgttggagcactcggttatggttacatgtggtggaagggcatctcctttgcggacctaatgtatgtgactaagcgtaacatggcaaatgctgtttccagtatgactaagcatctggagcaagtgcaaacctctcttgctgctgctaaaaggcatttgactcagcgtattgaaaggttggatgataaattggatcagcaaaaggcgctttctggacaaataagagatgatgttactgatgcacgactgaagcttgagaatattggttcagaaattaagaacatcaaacaattggtttggggtctggatgaaaaaatggattcgatggaagccaaacagaacttttcatgtgctggtgtgatgtacctctgccaatttattgagcaaaatggtggaaagctgccagaacgcctggaaggctcaaaaatggctgggaagcgttttggaagccaaaatctcatacaggggttgcaactggccatagaaacagggaattttgacaaggaaacgttcaatgcacttaagaacaactctgattcaagataa</cdnaseq>

Protein Sequence

<aaseq>MAMVQAGMGLTRVVVLIGAGMAGSVVLRNGRLSEILGELQEILD KGEKGKDGEGGGGADMTDALTRQVRNLAMEVKQLASSRGSITVLNGGSGQTGVSGLIV PAATVGALGYGYMWWKGISFADLMYVTKRNMANAVSSMTKHLEQVQTSLAAAKRHLTQ RIERLDDKLDQQKALSGQIRDDVTDARLKLENIGSEIKNIKQLVWGLDEKMDSMEAKQ NFSCAGVMYLCQFIEQNGGKLPERLEGSKMAGKRFGSQNLIQGLQLAIETGNFDKETF NALKNNSDSR</aaseq>

Gene Sequence

<dnaseqindica>149..268#439..519#1214..1298#1712..1779#2021..2122#2417..2506#2749..2823#2899..2931#3410..3484#4071..4121#4364..4444#cccaaatcagctagagtggtcggctcgacccctcctccacgcctccgcctccgcctccgcctccacgacgtagcccagggcggctagggtttcggtttcctccgccgccgccgccacctcctcctcctcctcgtgcgcggcggcgaccatggcgatggtgcaggccggcatgggcctcacccgcgtcgttgtcctcatcggcgccgggatggccggctccgtcgtcctccgcaacggccgcctctccgagatcctcggcgagctccaggtgcgtcgcgtctccaccgccttggggggaagaatcccccgctcttcctcctcacctgaatcggtgatcctggtcctgggagaggtggcggcgcgccaccggattggattttgatttggtttggttctgatgatgatccgtgccttgcggacctctctcactcgttgcaggagatactggacaagggggagaaggggaaagacggagaagggggcgggggcgccgacatgacggacgcgctcactagacaggtgcgtcggtgatctccctgtccctagatgtttcagctagtatatgctcagggatgtgtccgattcagctgttcgattgattattgcgccatttttctttgccattagttaggtgctctggcttccccaccagagccccatgtcaataggagaagcatgggatgcattttaatgcgattattgtatttaaaaatggatgttatctgtgcctatcagtatatgtatctatagctgcagtgattgctgaattattgttttatagtggcaatgattcacattgcattgagtcagttctgcttgtattttttcttatttctgggaattgctagcttcaacaatgcattagttgttcttccattatgtataagttaatattgtcatgtgatacattaggttgtggccttggcatttctacgttcacaatgaagagctgttgagtatttttggaagtgtatagtagctgttgtaatattaattattactacaagccacaacacaagtgtgtgctcataagaagcattctgcgtgtgttttaaacagctgtggtatatgcaacagtaaacatactacttcaatattcccataatatttttttcattgtcatttatgagtaaaacagtttgcctatcttcatacacatatttgatactttgtttaattttgtcaagctagacttacaccttggtccatttaggtgcgcaacttggctatggaggttaaacaacttgcttcttcccgtggatctataactgttcttaatggaggttctggtcaaacaggtcagtctagcttctgcacaacctacataactgttacttcctcagtctagacatatatgtgtgccttgattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggtagtaaatcacaagctccacccattttatttgccctctttttttcttttctttcttgtagtgttctgacatgagtattacttatcgcttggcttcattttctcttgttttaaatttgaaagaattcacgtagttagggaatgagtggactgaacaataatcattactcactaattcagcctacatatttctgttgtagcttatttcagaaattggcttaattaaccagtgacctctttgatcagacattcatgatgttagtgttcttgatcttcttttttgcaggggtgtcaggtttgatagtacctgcagcaactgttggagcactcggttatggttacatgtggtggaaggtatgctgtacttctatcatagcctttatgtttgtgttgtgattgtaatagagtaactgccaaattgtaagatcagctttaattttggctgctattttttttatcagaaaccaaacctagttaactgctatttcttcagctggtcttgttctgttgaattgttttttatgtcttacatcggcagtagaaactctttggaagaacaattcattaatatgttttgattgtatttgttatccagggcatctcctttgcggacctaatgtatgtgactaagcgtaacatggcaaatgctgtttccagtatgactaagcatctggagcaagtgcaaacctctcttgctgtaagtcttactgttacaagtttctttcctagttcatcacgaagcattgctttttcacttgtctgtgagagtatggagtgtatactaataatctatgccaggacgagtttaatgcatcctaattcatctgcatctaacgtccacattttcatcttaaaaacaatccctgtatacattttcatcatatagaacatcacagaattcggttgtatgtcactgttgagatgtttggtagtttgttgtacaatttctgagatcctcaattgtgaaacaattttcttgattgtcatgcaggctgctaaaaggcatttgactcagcgtattgaaaggttggatgataaattggatcagcaaaaggcgctttctggacaaataagagatgatgtactttctccttaacattcatatcaatccatgtttggcattaacatgtcttcattttcacgcgcatgggttgaataattaagaaatgtctagtagcatatgcctatatgcaattattagcccaattatattttaagatgcactttttatttctttttagggaagtgaactgtgagaacttacagctaagtacattcttgttgtatcattttcacttttcaaatatctacttttttatccaggttactgatgcacgactgaagcttgagaatattggttcagaaattaagaacatcaaacaattggtttggggtctggttagtgtatttcttcccagccattctttataattgccttgttcaggttgtttcaatccccttttgcttctgcaggatgaaaaaatggattcgatggaagccaaacaggttggccacttggcattcacttagaaatgtttgtgtgttatttctgtccttttagtttcactattttctttttgcatagaacaatgcggtagtgcattctaagggtaccggttttagcctgggcaatgatattctgagttggaaatactcctgactcgatgtgtgttagcctcatgtcccaaccttagtgaaaagtggagattggctggcttgaaatttgctggggaagtaatggaattagctcttcagatttttttagtgcatgctgcactttattgaatttgtttggtgattggactgagacggcagcccttatctcttttgttccaactatactttgataagaaagacatctgttacaccaaacctagtgttcttttcatcctattgaaggttgaatttacatgtattcagtttatatggcaagctccttgaaccttggtttttgttataatgactaattatattttatcaacagaacttttcatgtgctggtgtgatgtacctctgccaatttattgagcaaaatggtggaaagctgccagaacgcctggtatgagcctgagcatttattatacaattcccagttctggcttaattatgtgtaacttatcaactattctgttcttttcatatgtatgccttgtgcttatatgacatccctttgatgacaagtcatgcattcagttgccacttttgtttaaatttgattttctaaggatatttattgaatgttagtattgcagagtatttctatggtgttgtaaattgcagttaagtagcatgtatgggcatgtttggattgatgcccaaataagcctgactaaaattttggcaagaccaatgcatttagccattgtgtggttcattgccaaagctaaaaaatttggttacattgtttagtctcttgttggtctcaaactaaacaaccaaagcagctctgccaaaattttgccaacaaactaaacactcaactttaccaaaattttggcaatgcccatatttttgacttgcaaatattttgctaagtttgagatgtctataaagcaaacaaactttatgttctttatatttggtatggtgtatgctatgttcagtttttatccacttctctgaacttctttgttcaatttgtacaggaaggctcaaaaatggctgggaagcgttttggaagccaaaatctcatacaggttagtagtaacattgagagatggtggcaccacaagttgattctcaatcctgattttcctacccaaaaaatgctcaaggcaattgcacttaaaatatttgtgagatttatgaaaaattcctgttgccaatatctcggagaagtgttctgatttcattaccttaattgaacctaccaactaagtctggatttaaatatttttggcgctggtgctgataatggccttgtgccactgcttttcaggggttgcaactggccatagaaacagggaattttgacaaggaaacgttcaatgcacttaagaacaactctgattcaagataaacaggttcgaggactgaccctttgcatgttgttgcctgagcagctgagcttattacttacagagttacagtcatgttctgaaggaatgaccaacaattttataggtccaacgtctgccaaagtaatttttgtcagggcggtatccgagggcatctcatctttccagaccacgccctccattgaaatgctgtaaaggataatttcttactagtttaacatgtaaaaagttccagccttttcaagttttctgcttgcagaaggtgctgctacattttaaagcttgtgcaatacttagtggttagggtttttttaccgtgctatgctggcaccgcttgtggtttcagaatttcaggcaacactttgccgtaaataaaaggacaacacgtgtggttcgtgtgatgttttcaaacccatttcatgttttatttgtaatatatgctacaagcttacgtagattttcaagtcggct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0182700, RefSeq:Os05g0182700