Os04g0457300

From RiceWiki
Revision as of 19:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0457300

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001059507.1 GI:115458743 GeneID:4336031

Length

2638 bp

Definition

Oryza sativa Japonica Group Os04g0457300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23247466..23250103

Sequence Coding Region

23248374..23248414,23248766..23249204,23249457..23249608,23249707..23249878

Expression

GEO Profiles:Os04g0457300

Genome Context

<gbrowseImage1> name=NC_008397:23247466..23250103 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:23247466..23250103 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactcccatcttcactttcattgtagcactgccttatgggctggagaaagtggacctgaagacaggagctggcatagcaaaagtgggaggcacagtgttaggattcagcggagcgatgatcctcgctctctaccagggtccatcgctcaccaagctaggacctgctgctgctcgatcatcatcgtcatcatcttcttcttctgcaacggcggcagtcgtcggtcatggcagcggcggcggcgcgcacaggtgggcgatcgggtcggtggcgctgctgggcggttcagcttgctggtccctgtggttcatcctgcagtcgaggatcgccaagaagtacccggcgctctactcgggcactgccctgatgttcctgctcagcttccttcagatggctgcagtcgcgttggccgtcgacagaattagcttatccccatggatcttaacaacgaagcttcagatcatcaccgtgctctttgtggggatagttggatcaggaatagcgttcttggcgatgtcatggtgcgtggagcagagagggcctgtgttcacgacggcgttcacgcccctcatccagatcatcgcagctgctatcaacgtcatcgttctccatgagcaactccatcttggaattgtgataggatctgctctggtaatcattgggctgtatttcgtactgtggggaaagaataaggaggcctcgtcgtcgtcttctccagcaaaggaggctgtgcctgcgctgcggcaacaatacggcggccatgatcaagaaacgactaatgatgtacaaatgcaaactgtctag</cdnaseq>

Protein Sequence

<aaseq>MTPIFTFIVALPYGLEKVDLKTGAGIAKVGGTVLGFSGAMILAL YQGPSLTKLGPAAARSSSSSSSSSATAAVVGHGSGGGAHRWAIGSVALLGGSACWSLW FILQSRIAKKYPALYSGTALMFLLSFLQMAAVALAVDRISLSPWILTTKLQIITVLFV GIVGSGIAFLAMSWCVEQRGPVFTTAFTPLIQIIAAAINVIVLHEQLHLGIVIGSALV IIGLYFVLWGKNKEASSSSSPAKEAVPALRQQYGGHDQETTNDVQMQTV</aaseq>

Gene Sequence

<dnaseqindica>909..949#1301..1739#1992..2143#2242..2413#atatagcaaggcgaaagcaacattagcaagcacacatatacatttgcagataggtatagctaagctctagccagataaaaagaagattatggtcaagagatcctgaattaatgggtagctgtaatagttggaagccaacgttgacaatggttggggtggtggtggtgttcgcggtgatgaacaccctcaccaagatggccttcaacgaggggatgcgctccaccgtcctcatcacgctccgtcagctcatcgccactctcttcctcgccccaatcgcctacttccgggagaggtaaatatacacttaattctttttgattcacttgaattacgacctttaccacaatggtgccgtccatggattaaattatttcatgaattggatttcacttacctatctatggttcccttgagtgtgctcaggataagtgttttgtataaatggcagttattcgtttagtccgatgcatatcagttaattgataggttttaatttcgtatatatgcgttaatcgattagtattggtactactatatattgctagctagcagctgtatagtaccatatatatgtgtattaattactagttggttgatacgtatgtgccaaatatgcatgcaggaagacaagaccaaagcttacggctgaaatcttggtgtgtctcttcttcagtgcagtgctcgggcaagtcattttcatatatgtataatatatctagtagtagctagcaattttaacttgatgaattgaaagatcgatatatattcttttctctaacaaatgaattgattaattacatagtaattaataataataaaatggtgcatgcagagcgtcccttacccaatggctcttcttcttggggctgcagtacaccacagcaacattcgcttgcgccttcatcaacatgactcccatcttcactttcattgtagcactgccttatgggtacgcaattaacaacctaactactccctcgttttagaatatagtaatctagaaccggatgagacatatcctaatactataaatttggacagagtgatattttggaatggagggagtaactacttaggagtagtactaaagaagaagaaatatttgaaagatgggatgtggatttttattcctcaaggagacatcctttcgttgtttgcatgtcatcaaaatagatattaatttttttaaaaaaaattagcaatatagatgacaatttttttaaaaaaattataactatttaggtggcatgcatgaaatcacttcctcggaaagatgtaagctaagctagtactagtgcaggctggagaaagtggacctgaagacaggagctggcatagcaaaagtgggaggcacagtgttaggattcagcggagcgatgatcctcgctctctaccagggtccatcgctcaccaagctaggacctgctgctgctcgatcatcatcgtcatcatcttcttcttctgcaacggcggcagtcgtcggtcatggcagcggcggcggcgcgcacaggtgggcgatcgggtcggtggcgctgctgggcggttcagcttgctggtccctgtggttcatcctgcagtcgaggatcgccaagaagtacccggcgctctactcgggcactgccctgatgttcctgctcagcttccttcagatggctgcagtcgcgttggccgtcgacagaattagcttatccccatggatcttaacaacgaagcttcagatcatcaccgtgctctttgtggtacgtttaattgatatatacaccttaattagttagtagtaattgctacagtaattgtgatcgatatgaatggaggacgagtaggggaagcctatacccgttactttccaacggaatacttgatttactggcgtcaggtagcagacataatatacacatgatatacctagatatcatgctaatgtcagtaacgtaaactgtatagtattcaacattatagcgttttgtagtatgatatgaatataaatgcaggggatagttggatcaggaatagcgttcttggcgatgtcatggtgcgtggagcagagagggcctgtgttcacgacggcgttcacgcccctcatccagatcatcgcagctgctatcaacgtcatcgttctccatgagcaactccatcttggaatgtacgtacgttagttacgctcatcacatcgatcgatcatgtctaattactagtataaattgattggcattaatcatgtgcatatatacatatatgcagtgtgataggatctgctctggtaatcattgggctgtatttcgtactgtggggaaagaataaggaggcctcgtcgtcgtcttctccagcaaaggaggctgtgcctgcgctgcggcaacaatacggcggccatgatcaagaaacgactaatgatgtacaaatgcaaactgtctagtactactacgtactgaaacaataattagtagtagtagctaattagcatgcacaccgcgcacttgatgatcgtggataaagaaaaatgcatcatgaaaaaaggagtaaaaaaaatccggccctgttttttttcccttcctcctatagtatatgcccgagtatgcatatcaggagggaagttggtcaagatgaattgcttttgataatgaaaatcatttcgtccttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0457300, RefSeq:Os04g0457300