Os05g0182900

From RiceWiki
Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0182900| Description = Hypothetical protein| Version = NM_001061358.1 GI:115462446 GeneID:4337997| Length = 1121 bp| Definition = Oryza sa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0182900

Description

Hypothetical protein

Version

NM_001061358.1 GI:115462446 GeneID:4337997

Length

1121 bp

Definition

Oryza sativa Japonica Group Os05g0182900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4964579..4965699

Sequence Coding Region

4964579..4965289,4965370..4965699

Expression

GEO Profiles:Os05g0182900

Genome Context

<gbrowseImage1> name=NC_008398:4964579..4965699 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4964579..4965699 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacttgggtgacaactctaagatcaaaagggcaagagccacgaattggcctacagtcatgtcaaagtttgtgcttgattggtaccttcagaagaagaaggagatgccacccaagaccaagttcaagaagatgcaccaccattattgcacgaccgtactaaatgctagatttgagacaactttcactgttgatcaggtccaccgccactttaggcgcttcaaggaggtttggaatattgtggcccgttatatgaatatgagtgggagtaggtttgacaagaaacacaaaatgctaatactacctccttcaactttggctagtctacctatagcagagcgtgcaattcttgttaaaccaattccattcttcgatcatatacaagctctctttggtgagtggtcagtggatgctgcccctgtgacagacccaattgaagctgctgacattaacgatgatgacatggaaatcctcgatccgttgaacatgatggcaaattgtgcagatgcaagggaccctgatggggcagacttggacaagtttgttttggaggatgaagatgactgtcatgaggtggcagcaagtagtgatgcagtgccttgtgaagtgatgtctgacactagtgcaccatctgcccagccatctggatcctttgctgagagcacaatggctgctctcaagcctggattgaagaagtgcaaagtagtcagcagaacaaaaacaaccccaaacccaaaaccgcaggcacccgtgccacatgatggcaggaaggcggatatggtaaagagtaccttagctgggatccatgacacccctgcaaaaccaatacgagcagcaccgacatcatcggacccaaatgctcctctatggaacatgctgaaagaaatcccactgacacctgctgatagactctcagttggaatttgcctttgtaaaccagagtttgaagtgcatcgaagctttttcatgaacatgggtagggagtaccttgaagcttgggcccataagttcttatctggaggtgagcctggatccttatag</cdnaseq>

Protein Sequence

<aaseq>MDLGDNSKIKRARATNWPTVMSKFVLDWYLQKKKEMPPKTKFKK MHHHYCTTVLNARFETTFTVDQVHRHFRRFKEVWNIVARYMNMSGSRFDKKHKMLILP PSTLASLPIAERAILVKPIPFFDHIQALFGEWSVDAAPVTDPIEAADINDDDMEILDP LNMMANCADARDPDGADLDKFVLEDEDDCHEVAASSDAVPCEVMSDTSAPSAQPSGSF AESTMAALKPGLKKCKVVSRTKTTPNPKPQAPVPHDGRKADMVKSTLAGIHDTPAKPI RAAPTSSDPNAPLWNMLKEIPLTPADRLSVGICLCKPEFEVHRSFFMNMGREYLEAWA HKFLSGGEPGSL</aaseq>

Gene Sequence

<dnaseqindica>411..1121#1..330#atggacttgggtgacaactctaagatcaaaagggcaagagccacgaattggcctacagtcatgtcaaagtttgtgcttgattggtaccttcagaagaagaaggagatgccacccaagaccaagttcaagaagatgcaccaccattattgcacgaccgtactaaatgctagatttgagacaactttcactgttgatcaggtccaccgccactttaggcgcttcaaggaggtttggaatattgtggcccgttatatgaatatgagtgggagtaggtttgacaagaaacacaaaatgctaatactacctccttcaactttggctagtctacctgtaagtatttttatcgttggagatgattgcagtttcactattctccaagtgcactaatgattcttttcctccttgtacagatagcagagcgtgcaattcttgttaaaccaattccattcttcgatcatatacaagctctctttggtgagtggtcagtggatgctgcccctgtgacagacccaattgaagctgctgacattaacgatgatgacatggaaatcctcgatccgttgaacatgatggcaaattgtgcagatgcaagggaccctgatggggcagacttggacaagtttgttttggaggatgaagatgactgtcatgaggtggcagcaagtagtgatgcagtgccttgtgaagtgatgtctgacactagtgcaccatctgcccagccatctggatcctttgctgagagcacaatggctgctctcaagcctggattgaagaagtgcaaagtagtcagcagaacaaaaacaaccccaaacccaaaaccgcaggcacccgtgccacatgatggcaggaaggcggatatggtaaagagtaccttagctgggatccatgacacccctgcaaaaccaatacgagcagcaccgacatcatcggacccaaatgctcctctatggaacatgctgaaagaaatcccactgacacctgctgatagactctcagttggaatttgcctttgtaaaccagagtttgaagtgcatcgaagctttttcatgaacatgggtagggagtaccttgaagcttgggcccataagttcttatctggaggtgagcctggatccttatag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0182900, RefSeq:Os05g0182900