Os04g0467400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0467400 |
|---|---|
| Description |
Similar to Poly(A)-specific ribonuclease PARN (EC 3.1.13.4) (Polyadenylate- specific ribonuclease) (AtPARN) |
| Version |
NM_001187045.1 GI:297723220 GeneID:9268289 |
| Length |
4805 bp |
| Definition |
Oryza sativa Japonica Group Os04g0467400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:23755555..23760359 |
| Sequence Coding Region |
23758239..23758339,23758555..23758685,23759903..23760294 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:23755555..23760359 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:23755555..23760359 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcagcgccgccgccaccccctcctcctcctcccccgccgccgcccgccgtccagaaccctactctcccgcctgctctcctcctcgccgcccgccagcggcggcggcggcggcgggggaggaggaggggtggcggtgaagcaggtgacgcgggggaacctggcggaggcgctggaggagctccgcgcgcgggtgcggggcgcggcgttcgtggggatcgacctggagatgagcggcgtgacgagcgcgccgtggagggacaccctcggactcgaccgcgccgacgtccgctacctcaagctccgcgactccgcggagcggttcgcggccctgcagctcggcgtctgccccttccgctgggaccccgccaagtccgccttcgtcgcccacccgcataacttctttatcttttctcggaatgagcccctgaatgattgttcaacacatgaatttctgtgtcagaccacatcgattgacttccttgcaaagtaccagtttgatttcaacacatgcttccgtgaagaacacaagaagaagaggcacttcagaaattatatacattgcataataatgaaacatctgcatatccaaacacttccgaggaggaagaagatgcgccattaa</cdnaseq> |
| Protein Sequence |
<aaseq>MQRRRHPLLLLPRRRPPSRTLLSRLLSSSPPASGGGGGGGGGGV AVKQVTRGNLAEALEELRARVRGAAFVGIDLEMSGVTSAPWRDTLGLDRADVRYLKLR DSAERFAALQLGVCPFRWDPAKSAFVAHPHNFFIFSRNEPLNDCSTHEFLCQTTSIDF LAKYQFDFNTCFREEHKKKRHFRNYIHCIIMKHLHIQTLPRRKKMRH</aaseq> |
| Gene Sequence |
<dnaseqindica>2021..2121#1675..1805#66..457#atccacggcaacgaaaccgagcccaacccactttgccccgcctccaccctacggcgccggcggccatgcagcgccgccgccaccccctcctcctcctcccccgccgccgcccgccgtccagaaccctactctcccgcctgctctcctcctcgccgcccgccagcggcggcggcggcggcgggggaggaggaggggtggcggtgaagcaggtgacgcgggggaacctggcggaggcgctggaggagctccgcgcgcgggtgcggggcgcggcgttcgtggggatcgacctggagatgagcggcgtgacgagcgcgccgtggagggacaccctcggactcgaccgcgccgacgtccgctacctcaagctccgcgactccgcggagcggttcgcggccctgcagctcggcgtctgccccttccgctgggaccccgccaagtccgccttcgtcgcccacccgtacgccgccgccccaccccccccccgcgcagttctccctcacctctccccccgatcccttcctgttcgaatccactagttgaactagaacctaataatataacacgggtttaacactagcacattgtgacccccccccccccccgcgcagttctccctcacctctccccccgatcccttcctgttcgaatccactagttgaactagaacctaataatataacacgggtttaacactagcacattgtgaattggtttcggttttgcagcttccgtgctgtagtagcttgctaattgcctttctgttcgaatccactagttgaactagaacctaataatataacacgcgtttaacactagcacattgtgaattggtttcggttttgcagcttccgtgcagtagtagcttgcagttcaccgataattttagctgccggtggttgcattttgatgcattcgtgattggtaggttacagtgattatactgttagtacttgtgccggacatagcacctggtgagcttcttgacacaaggggtgccattcttgacttagcctattaagaagctgcgattgttgtataagatttggggttacagacttacagtcttacagattgggttggtgattgcaactattgaattcaagcgctccttttcttattaggaaaactccaatattggctttgtatcgagaaaggtttggcaaaattctgcagatatgtactgttttactttagaagattgctgagaagttaactggtattcaacaattatgctcacagagcacggagtaagacaacacccaagaaaaattgatcaggaactcagaaaacctagaatggttattgaatgagtgctctctagaaaggcaaatttcttttataaactataactctccatatcccttctggagagagttttggtatggcaggtttgcatttttttaataatttgatgagatgttttacggtccttgcaagttactagagttacttccactttgaagaaatatcagccatttatcgctctaaagtgtaggcacctctagtacatttcaagaacacgtaaaacatctcaacctttgatatttctgaaagtgaaggtacttctagtacatttgaagcaccataaaatatctctttgtttgtttgtttcgcaatcagatctgccatcgacattctttcccaagacataaccatttcttctcactttaccaggcataacttctttatcttttctcggaatgagcccctgaatgattgttcaacacatgaatttctgtgtcagaccacatcgattgacttccttgcaaagtaccagtttgatttcaacacatgcttccgtgaaggtgctttctcttatctgtgctacttggtttattaaagctactgcatacatggttctgaatttatcaatccaaaactgcaggattgtccttggtcacagattaatcacttttttgggtttaattaatgggctagtacatctgaaccatgcattcaaagtggagcatctctttatttacaatatttggttaatctcaggaatatattatttatccagaacacaagaagaagaggcacttcagaaattatatacattgcataataatgaaacatctgcatatccaaacacttccgaggaggaagaagatgcgccattaaagagtgctgcggatgttcttttcacagaaagaatgaagatcaaattcaatgagtggcgcaattcaatagtcagcaatcaaagagtcgatgaccataggtcagaaaacttcaaattcgcagaccagttccagactgttttcttcaaaatgcgtcctgctatcatgcttaatggattcacgtcacatcagttaaagttaatccgacaggtattatttgatttcttcattaccttggaatatagggacagctggacattcgatttgtgaaaaacctaatcacatgcttctggagtttagcttcttagagttctgtagggttccatacgtcctttggttacaaggtacttgtctcaataaaatactatatttcctgtccaacatctgtctattttcattttggtactaagcagtaacggtggtttgtggaatcgcacccatttatgagtaaacttaggatacattagaatttagattgatattttctgttcaacattcttcaaataatcaatgttttgtacacatagtgatgcttcttgatttgcactatatctgcttctactcagataatatattttttttattttcctctacagattttaagaacacattttagggaccttgtgtatgtgtgtacatttttggaggatggcgtatcagagaagagagtagtttatacagacaccaatgaagacaagatatccttgatggtaaggaaaatattacctgttgaaatgaaacacacttcatttctttttattaaaacaatacctttttttttgctgctaactgctccaggcttactatttgactgagaatcaaatgatgccttgtcgcatttgaaatttacatttgtatttttctttgattttagattacttcaccaatctaaacatgtatgatggtctatttgagatatttttaatgatcaataatcaccctggctattttgctacagaaaaatgttcgggaagatctactaaaaagcagggaagcaaaagtcaaatcagcagtagggatccgtcatgtcattgatcttcttgcctcagaaaggaaattgattgttggtcatagttgtttcctaggttctctctctctctctctctctctctctctctctctctctctctctctctctctctcgcacacagttctcctggatgtattggaatttgctctggtagatgaccaactttgaattgatgagtgatgtctagcataagttttgatcttctactaaatatctttatttgcatacacagatattgcacaaatctacagcaaatttgttggtcctcttccttcatccatggaggaatttgccttgagtatcaacagaatgttcccacatatggcagataccaggcatcttatgtctgttaatgacgcggttcagtatcgtatgaggcacaaaagcaaatcactttcgtcagccttttcattgttgtgccctgcacttcatgcacctgatgagaagtcatccacccttccttctgtgagaattgaagtcgaggcagatgaaacagtgtatgatttcttgttatttcttgaaatataatgtaattattgtttctgcatgtacacttatactcatccttagtagcactagtaggtcttaccaactggtactatttatgatgtttctattttgttgttttttttcctattctgcaggttatcttgcttcacttcaggtgctaagcatgaagcaggttatgatgcattcatgactggatgtgtttttgttcagctctgtgcttatcatggcattaaatttgagcaactctctcccctggaggacctagcaacaaacattaatctgaagaaacacatcaatctgctgcccccatgctggaacagtggaacagtgcttgatttgagtactggcacggagagaccagatgcaggttataagcgtagatatcctgctgccgtgtatgacaacgtcattcttatctggggattccagtctaaggtgagaccaaaggatataaaggactgcatctgcaaagtgtttggtcgagcttctgttacatcagtcttcccgattgattccactgcggttcttgttcaattcagcaaacaagagtctgtaaacgatttcttggatctgaaggctaccttagagagtgcagatagtgctatttcagtcttgcaccctttgtcaactatactggaaggaggcaaaacacgagcggcaaaatatgatacctacagagatatttgccgctcctctgtatcaaagttctccttcgcggatcaagctgaagcggtttgttcaacttcaaacagcgagtccaagttcaaggagtgcaatgctgctgatggatccggagcatacgggagtgctcttgatggaactgtgcctgcctcggtgcagcagtcaggaggagcgaagtctggctccaagaataaaggcgacgatgatttttcataccaggatatcttagatgcgctacaggatggcaaaacatcagttggcaaacgaatgagtaacgcatgacttacatttttgccttctccttgggcctgtctgctctgaataacaattgttttgatgggtatcttatttcattaatctacttggcaggatgccaagattgctgtttattgtgtgcacatggtgcactgtaggctacagaaccttttactgatgaaagggaaaaaaaaaactttctgatctcattt</dnaseqindica> |
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