Os05g0185800

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Revision as of 10:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0185800| Description = Conserved hypothetical protein| Version = NM_001061364.1 GI:115462458 GeneID:4338004| Length = 3753 bp| Definition ...")
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Gene Name

Os05g0185800

Description

Conserved hypothetical protein

Version

NM_001061364.1 GI:115462458 GeneID:4338004

Length

3753 bp

Definition

Oryza sativa Japonica Group Os05g0185800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5247748..5251500

Sequence Coding Region

5248444..5248612,5248908..5248966,5249325..5250110,5250340..5251179

Expression

GEO Profiles:Os05g0185800

Genome Context

<gbrowseImage1> name=NC_008398:5247748..5251500 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:5247748..5251500 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccaaggtggccggagatggcggcggcggtggccggaggagcgaggacttgcgcgttgttttcctcagggtcggcgccgccgtcgcgctctccgtcgccgggctgctcctctcgcggcggcggccacggcagcaactccggttacctcctcctcctcctcgctcagattcggatggaatgaagggtggtggagggctcaaggatgagctgaggatcctcaagaatgaggataccaaggccaaaatcatcaatggaaactctgtccacactaccactaccactacaacgatgaccaccaccgcgttagtaccactgcccccaaaatgtagaactcttgatgatgatgaagaattcctcctcccagaattcaacgaaatagttctcaaagaattcggccgagacatgggcaacattgcaacctcacctgcaccaagggtaagcgaagaagatgcaacgaagaccccggaaatttttgagcttagagaaatggtcagatcacttcaagaaagggagaagaccctggagctacagcttctagagagctatggtttgcaggagcaagatgtcgcggtgcgggagctcgagaatcagctgaagatcaacaccgtcgaatcgaagctatacacgctgaagatcgaatccttgcagtctgaaaatgagaggctgcaggctcagttaactgaaagctcaaagctggcttcagagcttgaggcagctagaatgaaatgcaagctgttgaagaagaagctgagacaggatgcagaacaagcaaaggagagaattgcctcacttcaggaaatggccgattcttggcagtgtaaggagattattactgaggggaaattcagtgctgaggttgaggaaaaattgagtaagctagaggagttggaaaatgaggcaagagagcttagggttgtcaattcaaggctgcagcaggagaatgcacatcttgccaggcgattggagctcacacgcctgccccctgtacccaagcccatcaataacatggaggtaaaagcattgcaggaagctgatcatttgaggcaagaaaatgacaagctggcaaaagaggttgaacagctcaagactgacaggttttcagatgttgaggaattggtatatctgaaatggatcaacgcttgcctgcgttacgagctcaggaaccaggatgctccatcagggaaaaatgttgcaagggatcttagcaagacactaagcccccaatctgaagagaaggccaagcaactgataatggagtacgcaaatgctggtccggatgagaaaaactttgatcatatagagttctgttcagagtactcttcctcaagagcatcatcattaggcgaacccgacgacgcgtcgatcgatgtctcactgatgaacaagcacaagaaccctaagaagaaaaagttcttttcgaagcttcggaaattggtactgggaaaagaaaaggagaacaaaaccattcctactctggagaggaggatatcgatttcgagctgttcatttgacgagttcaatggaagagagtcaattgatagctattcttcattcatgacagaacctggtaattctggcaatcaacagcatgataatcacggctcccgttggcattctatggacagccaaagtgctcgacatctcagcaaggaaatcgcagatgcaagaaacctccatcttggggtcaagagtgtgtcttttggggaggggagagtgagtaattttgggcatagttctcaccttggcaatggtgaagccacggttcctgaagatgccaagaagattcacaaatttgcagaggcactgaagacatctagaccaggttctaggtcatcaaggaaggaccactga</cdnaseq>

Protein Sequence

<aaseq>MPKVAGDGGGGGRRSEDLRVVFLRVGAAVALSVAGLLLSRRRPR QQLRLPPPPPRSDSDGMKGGGGLKDELRILKNEDTKAKIINGNSVHTTTTTTTMTTTA LVPLPPKCRTLDDDEEFLLPEFNEIVLKEFGRDMGNIATSPAPRVSEEDATKTPEIFE LREMVRSLQEREKTLELQLLESYGLQEQDVAVRELENQLKINTVESKLYTLKIESLQS ENERLQAQLTESSKLASELEAARMKCKLLKKKLRQDAEQAKERIASLQEMADSWQCKE IITEGKFSAEVEEKLSKLEELENEARELRVVNSRLQQENAHLARRLELTRLPPVPKPI NNMEVKALQEADHLRQENDKLAKEVEQLKTDRFSDVEELVYLKWINACLRYELRNQDA PSGKNVARDLSKTLSPQSEEKAKQLIMEYANAGPDEKNFDHIEFCSEYSSSRASSLGE PDDASIDVSLMNKHKNPKKKKFFSKLRKLVLGKEKENKTIPTLERRISISSCSFDEFN GRESIDSYSSFMTEPGNSGNQQHDNHGSRWHSMDSQSARHLSKEIADARNLHLGVKSV SFGEGRVSNFGHSSHLGNGEATVPEDAKKIHKFAEALKTSRPGSRSSRKDH</aaseq>

Gene Sequence

<dnaseqindica>697..865#1161..1219#1578..2363#2593..3432#tccatccagttaagaaaagcagcagcacaagctgcacgagtagagagcactatcttggctagagaacaaagccagattccttggagttgtcctgccttctgaacaagaacaggccaagacagaaaggaaacaagctcaaacagaaataggagagagagattgagagagattggagggttcttgctagctttggggtgctttctttcttgcttttttgcttttcttggcgttttcgatggccgtgagctgaatccggagccttgcctgacacccccaattttagctgctgcttaggcagcctaatttggggattttgtctcaggcagtacaaatcccaaaaccaaattcagagactttgttggctaggctgggttaatctcctccccggtctggtcgattcgaagccatggagatatagcctgcaagcttcatggggctggagcgagctcgtatttcttgatgcaagtttcagcccctccaagaacaggttcaggttcttggccataatcttcttgcagtcaaaaagaaagtctcaatttcttgctcaaatgtttggattttttttattatcttttttttttggtgatcaaggtaggagagattatttgtgttccttccattgctggttggttgctgcagtctgcatgtggtggattcttgggaagaaggtggtggtgaggtgaggtgaagagggagatgcccaaggtggccggagatggcggcggcggtggccggaggagcgaggacttgcgcgttgttttcctcagggtcggcgccgccgtcgcgctctccgtcgccgggctgctcctctcgcggcggcggccacggcagcaactccggttacctcctcctcctcctcgctcaggtatcaacagcagaggcgtcttgttcaacgtttttttttcatttcgggaagaaattccagattttcagatggaaaacaaaatgaaatttcaacgaaaaattggaatatgaacaatattttggctcaatttcaaataaatttgattcgttttgggccggaggaacattcggacccaccggtcaatctgaatttttgggaatttcgttccggaattgtgaacccgttgtttgttgctgattgctactcctagttagaaaattttggtgatgaatcgtttcttgatgtttttttgcagattcggatggaatgaagggtggtggagggctcaaggatgagctgaggatcctcaagaatgtaagaatcttgtttgcacataattattataaattgtatatattaatgtacttttcatacttccatttatatttagaatggttcagttttggatgtatggtcttgaactgttcataatccagctatattttcctcattatattataaattctctaagtctgtccatatcacatgcatttggggtgtggactttgcttttgttttttaatttcaaccttttttcttctctatttttttagtctcatactgcttgtttctattccagcagtttgacaaaatacaacttgtcctcaaatgttaccattgtattccatttttcttctccttatgttgaccctcttttgttttgattgtgaaggaggataccaaggccaaaatcatcaatggaaactctgtccacactaccactaccactacaacgatgaccaccaccgcgttagtaccactgcccccaaaatgtagaactcttgatgatgatgaagaattcctcctcccagaattcaacgaaatagttctcaaagaattcggccgagacatgggcaacattgcaacctcacctgcaccaagggtaagcgaagaagatgcaacgaagaccccggaaatttttgagcttagagaaatggtcagatcacttcaagaaagggagaagaccctggagctacagcttctagagagctatggtttgcaggagcaagatgtcgcggtgcgggagctcgagaatcagctgaagatcaacaccgtcgaatcgaagctatacacgctgaagatcgaatccttgcagtctgaaaatgagaggctgcaggctcagttaactgaaagctcaaagctggcttcagagcttgaggcagctagaatgaaatgcaagctgttgaagaagaagctgagacaggatgcagaacaagcaaaggagagaattgcctcacttcaggaaatggccgattcttggcagtgtaaggagattattactgaggggaaattcagtgctgaggttgaggaaaaattgagtaagctagaggagttggaaaatgaggcaagagagcttagggttgtcaattcaaggctgcagcaggagaatgcacatcttgccaggcgattggagctcacacgcctgccccctgtacccaagcccatcaataacatggaggtgaatatttactgttcttgaactgtattgtagctggcacttactaatcaatcttaatcttcagatagaggttgttactcgtcagaaggaaacgctgttcttgatatttggtttgaaagagcaatcaattgtttctcataagcgctactgatttttcaaactcatttttcagtgtttacttcagcttgtgttgctctgtcaggaactgaacaagtaaaattggttgcaggtaaaagcattgcaggaagctgatcatttgaggcaagaaaatgacaagctggcaaaagaggttgaacagctcaagactgacaggttttcagatgttgaggaattggtatatctgaaatggatcaacgcttgcctgcgttacgagctcaggaaccaggatgctccatcagggaaaaatgttgcaagggatcttagcaagacactaagcccccaatctgaagagaaggccaagcaactgataatggagtacgcaaatgctggtccggatgagaaaaactttgatcatatagagttctgttcagagtactcttcctcaagagcatcatcattaggcgaacccgacgacgcgtcgatcgatgtctcactgatgaacaagcacaagaaccctaagaagaaaaagttcttttcgaagcttcggaaattggtactgggaaaagaaaaggagaacaaaaccattcctactctggagaggaggatatcgatttcgagctgttcatttgacgagttcaatggaagagagtcaattgatagctattcttcattcatgacagaacctggtaattctggcaatcaacagcatgataatcacggctcccgttggcattctatggacagccaaagtgctcgacatctcagcaaggaaatcgcagatgcaagaaacctccatcttggggtcaagagtgtgtcttttggggaggggagagtgagtaattttgggcatagttctcaccttggcaatggtgaagccacggttcctgaagatgccaagaagattcacaaatttgcagaggcactgaagacatctagaccaggttctaggtcatcaaggaaggaccactgataaacaaatagcataggaacaatctgctgcagagtgcagtaggcccatcttcctggatgtatatatttctccagttcttgatgggagattacttatagaagatgctactggaataaagcacacatgctttattctgtgtaaaatgtacaatacagtatatagtagtgtagtgtactaacctttaatcccagccctcaaactattcatttggggttggcttgtacttattcagtgtattgttcatgtattgctctatgcatacttcactccagctacaaacatacagctctttgacaagttatttatgtgtgcaaagttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0185800, RefSeq:Os05g0185800