Os05g0187100

From RiceWiki
Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0187100| Description = Similar to Hexokinase| Version = NM_001061370.1 GI:115462470 GeneID:4338010| Length = 3816 bp| Definition = Oryza s...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0187100

Description

Similar to Hexokinase

Version

NM_001061370.1 GI:115462470 GeneID:4338010

Length

3816 bp

Definition

Oryza sativa Japonica Group Os05g0187100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5319388..5323203

Sequence Coding Region

5319911..5320055,5320275..5320405,5320513..5320611,5320716..5320871,5320964..5321038
,5321219..5321398,5321539..5321689,5322889..5323076

Expression

GEO Profiles:Os05g0187100

Genome Context

<gbrowseImage1> name=NC_008398:5319388..5323203 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:5319388..5323203 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcggcggcggtggcggcggcggagcaggtggtggcggcgctgcgggaggagtgcgcgacgccggcggcgcggctggatggggtggcggcggcgatggccggcgagatggcggcggggttggcggaggagggcggcagcaagatcaagatgatcgtttcctacgtcgacaacctccccaatgggaccgaagagggcttgttctacgcgctggatcttgggggaacaaacttccgagtcctgcgtgtgcagcttgctggaaaggagaaacgggtcgtgaagcgcgagtcgagggaggtctcgatccctccccatctcatgtccggcaactcctcggagctgtttggcttcatcgcttccgcgttagccaagttcgtcgctgatgaaggacataatgccgtgttcaacgacaggcaaagggaactggggttcaccttctctttccctgtgcggcaaacatcgattgcgtctgggactcttatcaagtggaccaaggcgttttctattgatgatgctgtaggtgaagatgtggtggccgaattgcagatggccatggagaagcaaggtctggacatgcgcgtttccgcattgatcaatgacactgttgggacattggcggcaggcagctactacgacgaagatattgtcgtcggtgtgatcttaggcactggctcaaacgccgcatatcttgagaaggcaaatgctatccctaagttggaaggcgagttaccaaaatcaggaaacatggttattaatacagaatggggtaacttctcctcatcctgtcttccaataacagaatatgatgaagcactagataaagagagcttaaaccctggagagcagatcttcgagaaattgatttcaggaatgtatctaggtgaaatcgtaaggagagtgcttcttaaaatatctttgcagtcttcaatttttggcaatctagatcagaccaagctcaaaacccgctttattctgaggactcctgatatttccgtgatgcatcatgatggaacacctgatctcagaattgtggctgaaaaacttgcagataacctgaaggtaatcttcatcagtaaatccagcattgaactgtattccctctatccattttatgcacaatga</cdnaseq>

Protein Sequence

<aaseq>MVAAAVAAAEQVVAALREECATPAARLDGVAAAMAGEMAAGLAE EGGSKIKMIVSYVDNLPNGTEEGLFYALDLGGTNFRVLRVQLAGKEKRVVKRESREVS IPPHLMSGNSSELFGFIASALAKFVADEGHNAVFNDRQRELGFTFSFPVRQTSIASGT LIKWTKAFSIDDAVGEDVVAELQMAMEKQGLDMRVSALINDTVGTLAAGSYYDEDIVV GVILGTGSNAAYLEKANAIPKLEGELPKSGNMVINTEWGNFSSSCLPITEYDEALDKE SLNPGEQIFEKLISGMYLGEIVRRVLLKISLQSSIFGNLDQTKLKTRFILRTPDISVM HHDGTPDLRIVAEKLADNLKVIFISKSSIELYSLYPFYAQ</aaseq>

Gene Sequence

<dnaseqindica>3149..3293#2799..2929#2593..2691#2333..2488#2166..2240#1806..1985#1515..1665#128..315#agagacctgtgtacgcgatcttggttagctccggcctttgatcttgaccaccaatctcgcatttcttggatcttctcgtcttcctcactcctcgatcgatccatcgattggttgctggtcggagaccatggtggcggcggcggtggcggcggcggagcaggtggtggcggcgctgcgggaggagtgcgcgacgccggcggcgcggctggatggggtggcggcggcgatggccggcgagatggcggcggggttggcggaggagggcggcagcaagatcaagatgatcgtttcctacgtcgacaacctccccaatgggtaactaattactactagtaattatatttataatcactaataatcacaggtcttgtttccttttaattactgtttcatcatccacttcttcttttagctctctcctacttggaaatttcttagtaattgtgtggttcttggatgccatgaacactttaatatcagcagctacagatgattcggatactctgattgaaaataaaaattggtttgtcaggattaatttgcaagctggtttaatctcctttggttaagtaggtggtggttaattgcatgataatcacatttttagtaggtgttttttctcccaatttggtttcatgtcggttggtaacatgagctatcgttggcttgttgccacctgcagtgagctgccagtgacacagcgtcgtgtgtcggggccaagcaaattgggattagattaaattaaattaaattaatccctagaaggctagaacataatttacctactctttttttttaaaaaaaagaaaaagttaccgcgctcttgcgtgtccatgcgcgtgtcaaattgctcgcactcgtgtcacctgctgcggcagcacgtgtgtgaccccgtgcaacattgcgtgtcagcgtgcgagcgtgtaaccgtgtctagttacagcttgccgatgccaaaaaaaaaaaggcagaaaagttttcttgttaagatcagcagaaaagttttcttttatttgttgcgattagcaggaaattgttttcttgctaagctcgctgccaagacagcataactgcagagcatcaatgcgtgtagtgttactgcatttctgtagatgcaccagctgagacttttcgtttttgtatgattagcggaaaatatcttttgctattctcgttactaaaacaacagaatagtggaacagcaatgtgtgcggtactgtatttctgcataaaaaggtaaaaaaaaagtttccattttttttaaaaaaaaatctgtagtttgcagaaaaaggctttttgtcaagtttgctgccagaatgacataaatgcagaacaacaatgtgtttatcactgcatttctccttttctgttttttttttttttgtgaatagcagaaaagggcttaagcaaagctatctgccaaagcaacaaaatcgcagaacagcaatgtgtgtattactgtatttttcgtgatcagcatgactaacaaccttttgttgtgctaaataatgtaggaccgaagagggcttgttctacgcgctggatcttgggggaacaaacttccgagtcctgcgtgtgcagcttgctggaaaggagaaacgggtcgtgaagcgcgagtcgagggaggtctcgatccctccccatctcatgtccggcaactcctcggtgagtgagcatgtccacacttgtttccatatagtatcataagtttttgggtgaattggctagtatatatcatagtaaaacatcacatttagtctcattggatgaccatgtttgtaatgttgctgtgatgccaatctcaggagctgtttggcttcatcgcttccgcgttagccaagttcgtcgctgatgaaggacataatgccgtgttcaacgacaggcaaagggaactggggttcaccttctctttccctgtgcggcaaacatcgattgcgtctgggactcttatcaagtggaccaaggcgttttctattgatgatgctgtaagaattctcttgatttgtcagttttcccacatcactgcatcagttgttatctaaaaaaacaaattcacaacatcaatgtcacagcgaatctgtttttcacattgttatgtgaaatgctgtcagaattttgtcattggtttctttttctgaaattagtgcttctttggaatatgacaggtaggtgaagatgtggtggccgaattgcagatggccatggagaagcaaggtctggacatgcgcgtttccgcattggttagttctgaaatgatcagttccatatcatttttgaacaaagcgaaatttgttcttatgataagcttgacattattttttgactgtttcagatcaatgacactgttgggacattggcggcaggcagctactacgacgaagatattgtcgtcggtgtgatcttaggcactggctcaaacgccgcatatcttgagaaggcaaatgctatccctaagttggaaggcgagttaccaaaatcaggaaacatggtaaggattagatatttctcaaccgaagtaactggcatgtactgcatagaatcatctactatctgtatttggatttctttctcactgtactttctgaatttcaggttattaatacagaatggggtaacttctcctcatcctgtcttccaataacagaatatgatgaagcactagataaagagagcttaaaccctggagagcaggcaagtttctctagaagattgcatactcctcacatgtcaaaagttttacccacattatatagaactgctacctgttgtctaaaaaaactatgacttgtttttttcagatcttcgagaaattgatttcaggaatgtatctaggtgaaatcgtaaggagagtgcttcttaaaatatctttgcagtcttcaatttttggcaatctagatcagaccaagctcaaaacccgctttattctgaggtatatttctcgctaaactcagttgtgtggtaatcttaatctataagctaggcaaataaagcatgatttgctgagaatatctataggatcacttggagtttcaccattgatccataataattattaggcgcaaaacatatggctttgcaattttccaaaatgagataagcaactttgaaaaaagatgtgctggcttatcctctctctcattatattcaggactcctgatatttccgtgatgcatcatgatggaacacctgatctcagaattgtggctgaaaaacttgcagataacctgaaggtaatcttcatcagtaaatccagcattgaactgtattccctctatccattttatgcacaatgaacacattacacggcattgtccacttttaccacagatcacagacacatccttagaaacaaggaagatggttgtcgaaatctgtgacatcgtcacccgaagatcagcccggctggctgctgctgggatcgtagggatcctcaggaagatcggcagaggcgtcccaggcgacaagcgaaagtcggtcatcgccatcgatggcggtctatatgaacattacaccgaattccggcagtgcctggagaccacgctgacggagttgctcggagaagaggcgtcgaagtcggtggctgtcaagcttgcaaacgacgggtctggccttggagctgccctgattgcagctgctcattctcagtacctgaattgattccccatagacagagttccaacttttattagtgactcagtgctgttgttatagtttatagaatgtggtgaagttctgtatgtttcgaaggagcctgatggactctacaaacaaaattttcagaaatgaaatcgaagccaaatgtgttggtggtgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0187100, RefSeq:Os05g0187100