Os05g0189300
| Gene Name |
Os05g0189300 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001061381.1 GI:115462492 GeneID:4338021 |
| Length |
1969 bp |
| Definition |
Oryza sativa Japonica Group Os05g0189300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:5454753..5456721 |
| Sequence Coding Region |
5455022..5455406,5456308..5456678 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:5454753..5456721 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:5454753..5456721 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcgccggccaataatggcgacgacgacggcgaggttgctcctcctgctcacggtggcgggcttctgcctctgccacaccacctgccaggaggcggcgccgccgccgccgccgtactgcggcagcctgaggacggccgtggaggcgcggaacatcatcgggtggaagacggtgccgccgccgtgcgccaagtacgtcgccgactacatcaccggcgagcggtacggccgcgacgccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctctccggcaccggcaaggagatctgggtgttcgacgtcgacgacaccgccctctccaccgtgccctaccaagccaaccatggctacggagttcaaccgttcgacaaccagagcttcctcaagtacgtggtgcagggaagcgcgccagcactgcagagtacactgcggctttaccgacggttactccagcttggtataaagccggtgttcctgacagaccgcaccgaggaccagaggacggtcacaaccaacaaccttattaagcagggctactgcaattgggagaagcttgtgctgcagccggttaggcttcagacctcgacgttggcgttcaagacctgcgaacgacagaagctggtgaatgatggctacatcatcgtcggcaacattggcgaccagtggaacgacatccgccgctcgccggatggttgccgcacctttaagttccccaaccccatgtactatgtcgactag</cdnaseq> |
| Protein Sequence |
<aaseq>MRRPIMATTTARLLLLLTVAGFCLCHTTCQEAAPPPPPYCGSLR TAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGTGKEI WVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQLGI KPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQPVRLQTSTLAFKTCERQKLVNDGY IIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYVD</aaseq> |
| Gene Sequence |
<dnaseqindica>1316..1700#44..414#acctcttcaatactctcactgcaatttctggagctcacactgcatgcgccggccaataatggcgacgacgacggcgaggttgctcctcctgctcacggtggcgggcttctgcctctgccacaccacctgccaggaggcggcgccgccgccgccgccgtactgcggcagcctgaggacggccgtggaggcgcggaacatcatcgggtggaagacggtgccgccgccgtgcgccaagtacgtcgccgactacatcaccggcgagcggtacggccgcgacgccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctctccggcaccggcaaggagatctgggtgttcgacgtcgacgacaccgccctctccaccgtgccctaccaagccaaccatggctacgggtaagtatatatacaaacatgtacactagctagctcatgcatactagctaggaattccattcatcaaaagccaaatccatactcaacatttaacagtcaaccatcttgaaaaaatgacaatctagaactaggattgcaaaaatgatcagctagcggcaaaaatgaacaaaaaaaaaacgccttagaaactaaacaataattttaatcaaaattggttcgactaaataaatactcacgttagtagtcaaaaagattttactgatgaccatagatcgtagcaaaaaaaattatattgaacaaaatatcatattaaagtatgatggattattcaatagtttgtaccatatagactctttagttttagttttcctaaagtttaataatttctgacttcggagcgaatatatattgattgtaccaacattgcgctcttattcttagaattgtattactttaatttcaactgaaaattaataattagcgagattgtaattgatctagactcttcttttaatgtaaagcgctataattataaaaaatgaccaatgtaattggaacatatatagttaaatctttttttctctagctaatagctcatgtcctaaatataagttgtttaaaaaaaaggataggaggaaacattctcttttagtcatctcgtaagtgaaaatttcaattttaacttttttcagtgttcctctgataagtactttaactaaaaacgcctggatttcagtggaatggaatattcaatgtcgtaaaaaatgctttcttcgtgtacaaaattgaattgaagaaaatgcatacatttagaatacccaatggagtatcaataataactgccaacatatacagcatacggattggtgaccttaactgatcccccttgattaatttgcagagttcaaccgttcgacaaccagagcttcctcaagtacgtggtgcagggaagcgcgccagcactgcagagtacactgcggctttaccgacggttactccagcttggtataaagccggtgttcctgacagaccgcaccgaggaccagaggacggtcacaaccaacaaccttattaagcagggctactgcaattgggagaagcttgtgctgcagccggttaggcttcagacctcgacgttggcgttcaagacctgcgaacgacagaagctggtgaatgatggctacatcatcgtcggcaacattggcgaccagtggaacgacatccgccgctcgccggatggttgccgcacctttaagttccccaaccccatgtactatgtcgactagctagctagctatccatggatatataccttgtttgtgtctgtttcatctactcgttttttgtcatgaatttgcatctagtaattaatctttgacgcgtgcatatgtttgatatgtttgttaatttttcgtgagatgaaaattgaatttgtaataacgcttgtttggcagttggccattgattggtcaatgtactgtgttgagcaagcttgttgtatttttacagaattaataatggaactgatgggccaatatgatgtcttgcactactt</dnaseqindica> |
| External Link(s) |
