Os04g0505000

From RiceWiki
Revision as of 19:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0505000

Description

Protein of unknown function DUF869, plant family protein

Version

NM_001059784.1 GI:115459297 GeneID:4336333

Length

6106 bp

Definition

Oryza sativa Japonica Group Os04g0505000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25606348..25612453

Sequence Coding Region

25609444..25611224,25611329..25611386,25611781..25612197

Expression

GEO Profiles:Os04g0505000

Genome Context

<gbrowseImage1> name=NC_008397:25606348..25612453 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25606348..25612453 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactgaaatggaggattccttaagatcctgcacagagcagctactccgtgttagagaagagaaagaacgccttatcatcgaagcagctgataagatctctttggagcagaagaaagtgtggagtctgcagcagaagttagaagatgcaaataagcggtttgcaaaggtcaccactgaaaactacaatcttcgcaatattgtcaactccaaggataaggtgatcactgagctgagtgagtctgcagcactcctgaaccaaaagttaattgatgccacagccagacttgaattcacacacaaacagtgtggctctcttcagtatgaggtgcgcatccttcagaaggaactcgagattcggaacaaagagcgggagtttgacctcaaatcaattgatgctgcccagaagcatcagcaggaaagcaccaagaagattactgcattggaaactgaatgccagaggctgcggaccatggtccagaagcgtcttcctgggcctgcggctttggcgaaaatgaaagatgaggttgagcgacggggcagtaattgtgttgagaacagaaggagaaagccacgttcatctgcacagtcatcaccgcaggtggtgactccaaggcatcctgtttctgaaggttaccttgtcaagatgcaggaattggatgatgaaaacagacacctcaggcaattgttggccaagaaggagaatgacctccagtttgtgcagttgcagtatgcagatgaagcatcgaagctgtcagtagtgcaagggcagctcaaggagttggttggtagccatgaactggatgacgacaaccgtcctgaaccatgggcaaatagttctttagtttccaaaggagagcattttagagttgggaagcaacatgcatctcacagtaggggaagaagaatagcaggatctgacatgcagttgcttgtagatatatcggagatagagaagcttgaaatgatttcaaggccttcaagtgcgccacatcaatgcgtgccagatgcttctgatacagagtccaaaactgccctgacagaaacagtttgccaagatcgaatccttgaagatggtctatctgacaagtatcccgagtggattcaagatgttttggaacttatcataaagaagcatcaagtccttaaaataagcgtcgatatcattattgatgaaataagatctgcattgaggactgagatttcagacaaaggaaatgatgctgcaaatgtgacatatgaccaggcagtaatagacagcatggtggctactcttgttgaaagagtgagttgcatgatcgaaagatcttctggaaacaatgttctgagttctcaatcatttttgcatgagaaatctgaactcacttgtcatcttgagcaccttatctgtgtatgtagtgatgtactggatggaaaggccaatcttcgaaagttcatcgaagaagtttgcttaaccctcgagtggacagtgaaccaatatatttattgtgtcgatgctctcgaaactgtggattgcatcacaaatgatttcgatggaaatgtatctcttagatcattaaacatgcaggaaaaacaacaaatgcaaagcacaaatccgaaagtggctgtaggagttcaacaagaggtacagaaagaaccgtttctgatccctggtgaccccgtagaaaatcattctcaggttcagtttgtcacttgtaagcttgataaggaactgctggctgttaggcaagatcatggtgataattgtcaagaaaagcagtcagtacattataaagaagaaagtgctacggctgatgggagcatgcaattgttaccagaagaagaggggaaacaactaacaaattcggcaatatccgcagcagctgataaacttgcagagtgccaagaaacaattacaagcctaagcaagaaactgcaggcgctaaaatgtccagcaaatgcggatgctgtagacaaaagaaagtctgataacttgcacctgttagttgcaaatcagaattttagttctcccccatccatagaagcagcatgcaagaaagagaacgatgaacgtgttacaactgaaaagaaccttctacaggagcaagatgttggcactggccataaagttgataacaatggttcaacacaaatcgctcctcgtcccgtgatccccaagtcgccactaaccactgtttctgttgatatgaagaagaggaagaaaaagaagcagggtgggagcttgctgagtagactcatctttgggaagaaggcataa</cdnaseq>

Protein Sequence

<aaseq>MTEMEDSLRSCTEQLLRVREEKERLIIEAADKISLEQKKVWSLQ QKLEDANKRFAKVTTENYNLRNIVNSKDKVITELSESAALLNQKLIDATARLEFTHKQ CGSLQYEVRILQKELEIRNKEREFDLKSIDAAQKHQQESTKKITALETECQRLRTMVQ KRLPGPAALAKMKDEVERRGSNCVENRRRKPRSSAQSSPQVVTPRHPVSEGYLVKMQE LDDENRHLRQLLAKKENDLQFVQLQYADEASKLSVVQGQLKELVGSHELDDDNRPEPW ANSSLVSKGEHFRVGKQHASHSRGRRIAGSDMQLLVDISEIEKLEMISRPSSAPHQCV PDASDTESKTALTETVCQDRILEDGLSDKYPEWIQDVLELIIKKHQVLKISVDIIIDE IRSALRTEISDKGNDAANVTYDQAVIDSMVATLVERVSCMIERSSGNNVLSSQSFLHE KSELTCHLEHLICVCSDVLDGKANLRKFIEEVCLTLEWTVNQYIYCVDALETVDCITN DFDGNVSLRSLNMQEKQQMQSTNPKVAVGVQQEVQKEPFLIPGDPVENHSQVQFVTCK LDKELLAVRQDHGDNCQEKQSVHYKEESATADGSMQLLPEEEGKQLTNSAISAAADKL AECQETITSLSKKLQALKCPANADAVDKRKSDNLHLLVANQNFSSPPSIEAACKKEND ERVTTEKNLLQEQDVGTGHKVDNNGSTQIAPRPVIPKSPLTTVSVDMKKRKKKKQGGS LLSRLIFGKKA</aaseq>

Gene Sequence

<dnaseqindica>3097..4877#4982..5039#5434..5850#agcagccgcccagattgcacactctctactcctcgtaccaaccatccaaatggacacaagaatatagagtgccatggctcgttagcgagcgttgcgagctaattaaccgtacgtgcgattgccgggagagaagccagccgctggccttcgctgcggcgcgcgcggtgtggcaacgacgagcaagcaagggggcaggtcatggctttgtccttgaactgagaaggtgagtgctcttgcatgctcttcttttgagtgacgcaaactgcttggtttctttgagtaatcagttggatcttggttcatgaggctttgctgattcaaacagaacatgttttaagactggtctcgcagaggagaaagtctggtggcgccacatgcatgtttgatcgccgcgttctattttttttttttaaaacaacacgcatgcatgtgccggaagaattaacttgtttggagtccgtccttgagaatttcagaatgagatcactctttacgagtactagcagtttcgatgtcggtatatggaattcacatgactggccgatggcctgatgcgctttgatgttcatctttgcacctcaaaactagttggtcgatcgtcagttcgtcactcgtttagttttacgcaattatgcgggtctttcagatgacaatgctactagtacttcctcattaattcagtatcacactctttagtcccttactttgcacttaagattttttttaataaaagaaaaccctgatcatgttcggagtggacgaatggtgtttgttgtttggtctgatgacctcatgtgtcaagctaataatttgttcatatccagcaatagtttttttctatcatgcccccaagtagaccagtacatttcatactccttggttctgtttggtgaagcttgtagcagtttatttcaaaatctttagtcacccaaaatttttacctacattgtgaggaaaactcagcttttccagatactgctatgttaagctctttctggatcaggcctttgcatgtatctctctctcttgacacaaaggctgagctgctgaggctatgttgtctcctgtgctctccaaacccgaagccagactagtccagcaccattgcgctaacacacaaatacccaaccgcaaaaccagatatccagcatcttataactaatcaaaaccggttacaattggtgctttggtggttttgacccaggttttgtcctacgtggcagctgagtcagcgtgggacccatgcgagcctcacatgtcaggatgccacgccatctctctcccctcctttctctctccctctctctctcactctcactctcactctcactcttctcttctcttctcttctaattcaccggtcatgccggtcggccgaagcagaagcaagagccactggtggaggggctaggggggtttcgtcgccagcgatggcctagatggagttgagcgttggtggtggcggtgttccgtgacccgccgcagtgttttcgcatcggggtgcagcagattgtgagcaccacctctcgtcatcgccttctccttcttccccgccaccggcgtcgaactcgcgttggaggagcgcggcctcatcggagacatggctgccgccatgaggattacaaacgcgaggcagccgccgtcgccgccgctgcctttgcagtcgacgtcatcacccgtgcagttgctcccccgccgcctgcgcccaccggttgccgcccgtacagctgctccctcgtcggtgcccgtgaaaaagagaggagagaggaagagaagtggagaggggaggagaagaagaggctgacgcgtggggctcacgtgggtccctcactgagtcagctaccacatcagataaaaccggaatcaaaaccgtcgagaaacctaatttgcactggttttataagttggggatacgtcatatctggtttcgcggtttatggacgattttatatcttgatgacaagtgtatggtctgagcgtccaaaactggacccatcttaatttgctttgagaaaactaggcccagcttaatttgttcttggcccaggccccttattctggtctcttccccgaaactgggaaaaggatcgagcccgaacggcgaacacggccgagaaagatccggtcttccatataccacaatcgtgaagcagagagcgaactttgcgcaggccacggcgtcgacggcgatgggctccgaggcgccgcctcccgcgcgacgcggttatgccgacgccccccgccgctatgagtctcgttggcggagggaggaggatgcggtcctcctggctgcggcgcccgcgcgggcgcgtacaggcacctggccggtgcacgtccccctctcgccggggcgtccggcctgtagtagattggcggcaggatgcttctggatgggtcgacggtgaggctcgcgtcgtcgcgtctacgccgagtcacttccatgtgagcagccaattgggtacccatatgctacagtgttttcactagaccgcttctgccgctagtatagggatctggacttgctcacttggtcctatgtagtttggatggcatgggatattggttattgagatatatttttagtaagttgttagtcgtaactgttaattttattaaattatttctattcttcacttggattagtttgatatgctgcataactcaattgtaccaaccggtggtttgctatttgtttgtagttaattgttgtagaatggagcatctgttaattttgacatagtttttttttgttactctgttcagttttccgttaaaagattccataaattttatggccctgtttattagttcacaccaaacttcccccaaacttccaactttccatcacatcacatcacatccaaaacttttctacacacataaactctaaacttttttttccaaaccaccaactttccccaaacttctccccaatttcaggaataatttatttatgactgttactgtgtttcaactttcaacgaaccacttactatagtagtactacctaacatcagagtctaataagatttggttttcatggtgtttcagaaggtgcatgataacgcgccacacgtgaaactatattcatgagggatgactgaaatggaggattccttaagatcctgcacagagcagctactccgtgttagagaagagaaagaacgccttatcatcgaagcagctgataagatctctttggagcagaagaaagtgtggagtctgcagcagaagttagaagatgcaaataagcggtttgcaaaggtcaccactgaaaactacaatcttcgcaatattgtcaactccaaggataaggtgatcactgagctgagtgagtctgcagcactcctgaaccaaaagttaattgatgccacagccagacttgaattcacacacaaacagtgtggctctcttcagtatgaggtgcgcatccttcagaaggaactcgagattcggaacaaagagcgggagtttgacctcaaatcaattgatgctgcccagaagcatcagcaggaaagcaccaagaagattactgcattggaaactgaatgccagaggctgcggaccatggtccagaagcgtcttcctgggcctgcggctttggcgaaaatgaaagatgaggttgagcgacggggcagtaattgtgttgagaacagaaggagaaagccacgttcatctgcacagtcatcaccgcaggtggtgactccaaggcatcctgtttctgaaggttaccttgtcaagatgcaggaattggatgatgaaaacagacacctcaggcaattgttggccaagaaggagaatgacctccagtttgtgcagttgcagtatgcagatgaagcatcgaagctgtcagtagtgcaagggcagctcaaggagttggttggtagccatgaactggatgacgacaaccgtcctgaaccatgggcaaatagttctttagtttccaaaggagagcattttagagttgggaagcaacatgcatctcacagtaggggaagaagaatagcaggatctgacatgcagttgcttgtagatatatcggagatagagaagcttgaaatgatttcaaggccttcaagtgcgccacatcaatgcgtgccagatgcttctgatacagagtccaaaactgccctgacagaaacagtttgccaagatcgaatccttgaagatggtctatctgacaagtatcccgagtggattcaagatgttttggaacttatcataaagaagcatcaagtccttaaaataagcgtcgatatcattattgatgaaataagatctgcattgaggactgagatttcagacaaaggaaatgatgctgcaaatgtgacatatgaccaggcagtaatagacagcatggtggctactcttgttgaaagagtgagttgcatgatcgaaagatcttctggaaacaatgttctgagttctcaatcatttttgcatgagaaatctgaactcacttgtcatcttgagcaccttatctgtgtatgtagtgatgtactggatggaaaggccaatcttcgaaagttcatcgaagaagtttgcttaaccctcgagtggacagtgaaccaatatatttattgtgtcgatgctctcgaaactgtggattgcatcacaaatgatttcgatggaaatgtatctcttagatcattaaacatgcaggaaaaacaacaaatgcaaagcacaaatccgaaagtggctgtaggagttcaacaagaggtacagaaagaaccgtttctgatccctggtgaccccgtagaaaatcattctcaggttcagtttgtcacttgtaagcttgataaggaactgctggctgttaggcaagatcatggtgataattgtcaagaaaagcagtcagtacattataaagaagaaaggtaactatttctgagaaccatcaatcatgtaactattttcagcactgtacactattattgagaatcatccaacataaatatgtaacatctattttatgatacagtgctacggctgatgggagcatgcaattgttaccagaagaagaggggaaacaactaacagtaatatcttatgtccttctaaacgttcttatgtttttttgtttgtaaattaatacacatctgaaatctgatgtttcaattcacaagttgaacttcacaacattccttgtttagctgagcaccacaatgcccatagctatcactcaatcactatcgcatgattccttagacattttatttttctattttatacatattccatcaaatgttcaaggtgcagtttatgtagcaagtgttgattaaaggcctactactgaataaatatagttgtacacttgcatgacactgggctatccattagtgagctttgaataagcgcaataattgtgaagtatattttctagtcattttcatgttggtatgatgagaaccataatggttgcaactcttgcagaattcggcaatatccgcagcagctgataaacttgcagagtgccaagaaacaattacaagcctaagcaagaaactgcaggcgctaaaatgtccagcaaatgcggatgctgtagacaaaagaaagtctgataacttgcacctgttagttgcaaatcagaattttagttctcccccatccatagaagcagcatgcaagaaagagaacgatgaacgtgttacaactgaaaagaaccttctacaggagcaagatgttggcactggccataaagttgataacaatggttcaacacaaatcgctcctcgtcccgtgatccccaagtcgccactaaccactgtttctgttgatatgaagaagaggaagaaaaagaagcagggtgggagcttgctgagtagactcatctttgggaagaaggcataaaacagctccttggctgctagcctgctacgctcctctgattaagttgttagtgcatccagcagtgctggagcttgttcttctaagttattccgatcccatgtccaataagagggggcaatgctacgtagctaaaatataatttatcggttatgtcatatgtgttgcgacgtgatcaacactatatgtttgtaaaatcctgttccagacatatgcatatggtcttatgattggtggatttattatggtacggggtact</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0505000, RefSeq:Os04g0505000