Os04g0507900

From RiceWiki
Revision as of 19:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0507900

Description

WD40-like domain containing protein

Version

NM_001059801.1 GI:115459331 GeneID:4336350

Length

2037 bp

Definition

Oryza sativa Japonica Group Os04g0507900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:25773178..25775214

Sequence Coding Region

25773297..25773624,25774262..25774977

Expression

GEO Profiles:Os04g0507900

Genome Context

<gbrowseImage1> name=NC_008397:25773178..25775214 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:25773178..25775214 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttggggtcgtgctacctcggcggcaacgccgacgcggtggagttctgcccgcaccgccccttccgccacgtcctcgccgccgccacctacacgctgcaggagcagggcggggagcggcaggaccgcgcgggcagcgtgtcgctcttcgccgtcgacgccggcgaggaggacgcgccccggaggctccggctgctccacacggtggagaccgccggggtgttcgacatgaagtggagccccgtggcgcctctgctcgcgcaggccgacgcccacggccgcctcgcgctctggcgcctggagcaggaggacggatcggacaaaggtgctgttctcagggatgtctgttctggagacatttcttcttcgatgtgcttgtttgtggactggaaccaaactgccaaggcactttccgttggattatcggatggttccctgtctgtggtttccatgagggaggaccgcttggaggtatcagaacagtggactgctcatcagtatgaagtgtggacttgctattttgatcgtgcaaatccacacttgttatacagcggatcagacgactgctccttcagctgctgggacttgcgacagaacccatcaaatgctgtgtttcagaacaaaaagtcgcataatatgggtgtctgttgcattgctcagaatccactagaggggaacatgctacttactggaagctatgatgaatttctcagagtttgggacataagatcaatggtgaaacccgttaatgtgaagtccctaaatttagggggtggtgtatggaggattaaatatcatcctcttattgcagatgttgtcttggctgcatgcatgcacaatgggtttgccattgttaaagtaggtactggggatgctgcagtagtggaaacatattgcaagcatgagtccttagcatatggtgcggattggcagataaatgaaggtgcagaacagaacaagaatttttcagttgttgctacctgttcattttatgatcgactcctccgtgtgtggcaaccggagaacctaggcaatctttaa</cdnaseq>

Protein Sequence

<aaseq>MDLGSCYLGGNADAVEFCPHRPFRHVLAAATYTLQEQGGERQDR AGSVSLFAVDAGEEDAPRRLRLLHTVETAGVFDMKWSPVAPLLAQADAHGRLALWRLE QEDGSDKGAVLRDVCSGDISSSMCLFVDWNQTAKALSVGLSDGSLSVVSMREDRLEVS EQWTAHQYEVWTCYFDRANPHLLYSGSDDCSFSCWDLRQNPSNAVFQNKKSHNMGVCC IAQNPLEGNMLLTGSYDEFLRVWDIRSMVKPVNVKSLNLGGGVWRIKYHPLIADVVLA ACMHNGFAIVKVGTGDAAVVETYCKHESLAYGADWQINEGAEQNKNFSVVATCSFYDR LLRVWQPENLGNL</aaseq>

Gene Sequence

<dnaseqindica>120..447#1085..1800#gactattttgcccccgccgccgccgcctcgccgcggaagtgaaagcgctctcgactctcgccgccgccgccgccgccgcgagccgcgtcgtgcgggaacgcgagggtttttccagggggatggatttggggtcgtgctacctcggcggcaacgccgacgcggtggagttctgcccgcaccgccccttccgccacgtcctcgccgccgccacctacacgctgcaggagcagggcggggagcggcaggaccgcgcgggcagcgtgtcgctcttcgccgtcgacgccggcgaggaggacgcgccccggaggctccggctgctccacacggtggagaccgccggggtgttcgacatgaagtggagccccgtggcgcctctgctcgcgcaggccgacgcccacggccgcctcgcgctctggcgcctggagcaggaggacggatcggacaaaggtgctgtttgttcctgcatttgcattaccatagaatcaaataagttgtctgctgtgtcaaaattggatcactatccacttactaagcttccatgaattatttactgaacatagtgatgcactgctactgatgccaaaggcaaattcaagttcttaggattctgaaagcgttctatcatccatgtgaatgttgcctgatgcttgcagaagtatttaggggttcaggggttatgcttttttttttttttggggggggggttggtgaaatgggtttcttactctcatggattgagtggatgtgttcccagtggttaatctggattaacaagaagttgcttcaactatgcaatattctgcccttctggaggtgatccgtgtctgtcatcttcttttgagaataaggcaatatgctgctgaatgatgttctaagtcaattcgtattcttgcatttctggatcaaatttggtcttgattttttagttaaattgccacgatagtctagttgattctgtactggaagcaggggagcttgtgtagctatttgtaaacacctcagtatttgtcatatttgtagtccaccatgtatttcttatatgttgaggctgaattcaagtgctttatgtgaccgaattatgcaggtgctgttctcagggatgtctgttctggagacatttcttcttcgatgtgcttgtttgtggactggaaccaaactgccaaggcactttccgttggattatcggatggttccctgtctgtggtttccatgagggaggaccgcttggaggtatcagaacagtggactgctcatcagtatgaagtgtggacttgctattttgatcgtgcaaatccacacttgttatacagcggatcagacgactgctccttcagctgctgggacttgcgacagaacccatcaaatgctgtgtttcagaacaaaaagtcgcataatatgggtgtctgttgcattgctcagaatccactagaggggaacatgctacttactggaagctatgatgaatttctcagagtttgggacataagatcaatggtgaaacccgttaatgtgaagtccctaaatttagggggtggtgtatggaggattaaatatcatcctcttattgcagatgttgtcttggctgcatgcatgcacaatgggtttgccattgttaaagtaggtactggggatgctgcagtagtggaaacatattgcaagcatgagtccttagcatatggtgcggattggcagataaatgaaggtgcagaacagaacaagaatttttcagttgttgctacctgttcattttatgatcgactcctccgtgtgtggcaaccggagaacctaggcaatctttaagagtgaaagtgccattgcactcagttcaagtatcactatgtggacttgtttccaggtagctcctcaaagttgtgctgatttatttaaagacatgagcttttggtagaatcatgtctgttccatagcttgtcattcacatatatttgtgtgatgccagctttcccgtcgcaaaactatatatttgtatggtcctcaaagatgtttcctgttgattatatttgaagtactccattttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0507900, RefSeq:Os04g0507900