Os05g0196200

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0196200| Description = Ndr family protein| Version = NM_001061400.2 GI:297604014 GeneID:4338041| Length = 2693 bp| Definition = Oryza sati...")
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Gene Name

Os05g0196200

Description

Ndr family protein

Version

NM_001061400.2 GI:297604014 GeneID:4338041

Length

2693 bp

Definition

Oryza sativa Japonica Group Os05g0196200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5896291..5898983

Sequence Coding Region

5897745..5897852,5897973..5898070,5898169..5898268,5898848..5898925

Expression

GEO Profiles:Os05g0196200

Genome Context

<gbrowseImage1> name=NC_008398:5896291..5898983 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:5896291..5898983 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggactcgagcgggtcgggttcgggttccgggtctgtgtcggtggacgtcgagcggatttccttcggcggcaaggagcatcaagtgaggacgagatgcggttcattatccgtcgcgatatacggagacgaggacaagccggcgctcatcacgtacccggacatcgcgttgaaccacatgtcctgcttccaaggattgctgttttgccccgaggtggcgtcgctgctgctccacaatttctgcatataccacataaatcctcaggggcacgagctaggagcggctccaattccatccgatgtgccggtgccatctgtagaggatctcgccgatcaggttgcggatgtgctcgatttcttcgggtacagtttcgcatcgtag</cdnaseq>

Protein Sequence

<aaseq>MGDSSGSGSGSGSVSVDVERISFGGKEHQVRTRCGSLSVAIYGD EDKPALITYPDIALNHMSCFQGLLFCPEVASLLLHNFCIYHINPQGHELGAAPIPSDV PVPSVEDLADQVADVLDFFGYSFAS</aaseq>

Gene Sequence

<dnaseqindica>1132..1239#914..1011#716..815#59..136#cagccacagccagccgaagcagccgaagagaagagggaaggagggagggagggaggcaatgggggactcgagcgggtcgggttcgggttccgggtctgtgtcggtggacgtcgagcggatttccttcggcggcaaggtctgtccgtgctcctccgtttcttgcttctcttcttctgcttcatttggggattttttgttctgggctgaggaccaggaggaggaggagttccatgggcgctttggaatttctcttcttcttcttcttctctttttagggaggttatggtttgagtttggttcttgggaagatataagtctttgtttctgaatgcttggtttctggaaatgcgattgctggtttctgtttttttttttaccatgataaaatcctctttttttgtttttgttttttttatttttgggtgtgtaatgttttcacacagcggggctgtctcgttttcagttctagccatcaatcttgtcacagttgcagtgatcttttttatgttttttgtttttggacaagcaaagcaattgtatcttgcttgcaacgaggactagtttattctggcacttcgaatcagtggacacaagcatacgcttccaccaaatttagtatactgtttaatttgctcgtaattcttcagacttatgcgttgtttcacttccaagccgttctcatttcgaagtgattatcactgcatgatttctccaggagcatcaagtgaggacgagatgcggttcattatccgtcgcgatatacggagacgaggacaagccggcgctcatcacgtacccggacatcgcgttgaaccgtgagtaacaaccacatctcgtgagattcttggaagacatggtagaattgggaattcatcgatcatatatgattacccatttcttgatttgcatgcagacatgtcctgcttccaaggattgctgttttgccccgaggtggcgtcgctgctgctccacaatttctgcatataccacataaatcctcaggggcacgaggtctgtagcctgtgtgatattgttcagacatgtccactgccactgcgtgatgcttgagtttctgttggttgggttgctcacatgatcattctcatgacatttgttaagatttcaatgcagctaggagcggctccaattccatccgatgtgccggtgccatctgtagaggatctcgccgatcaggttgcggatgtgctcgatttcttcgggtacagtttcgcatcgtagtccgagttcgttgtactctttttcagctagtggcatgtgacatcaatatatgagagctttttcattttttcagattaggatctgtgatgtgcctgggtgttacagctggtgcctatgtcctcactctgtttgcagtgagtgttcctgtacattgtgaattcaggagaaaatcttactcttagactgtgctaatgacaatcttcattttctcaattgtcgcagacgaaataccgggagagggtaataggcttgatgttggtttcccctctatgcagagccccatcatggagtgaatggttgtataataaggtaacttcatgtttcagtaagactgatcattttcactcatgccaagtaatgccaatgattaagtgtagcatttgatgcaccaggtattattaaatttgatctactattacgggactcgaggcttggtcaaggaatgcttgcttcagcggtacttcagcaaggtgacttcagaagtcactattctcagcttgtcttcttccaattttatacattatggctttattcactgtcttactgatgcattttctgcagaaagtgtgtggcagtggtcactatcttgaatcagacattgtacaagcttgtagaaatgttagttccttattgccaaaccatgaaattcctttatatcttgttgtttcaaatcataaactgaaggcgttatttatttttattgtgcagttgcttgatgagaggcagggtgaaaatatctggcggtttcttcactcgataaatgagtacgcgttacctcctttaattttgtttcctagtcaatgggaatacttcatatcttggagctcatataaactacactccatcaggaggcatgacttaacagatgcattgaggaagctgcagtgtcgaacactgattttcgtaggagaaaactcgcaattccatgaggatgccatccacatgaccacaaagttggacaagagatattgtgctctagttgaggtaacatatggatccaacctgtgccgttaacaatcaagacaaacttgaagaaaaaaaattgtactcagggttgcttcatggggtaattgcaggttcagggttgtggctcccttgtaaccgaggagcagccacatgctatgctgatgccgatggagtacttcctcatgggatacgggctttacagaccgtaccagatgaacagcagccctcgcagtccgctaagtccatgttgtatatcaccggagttgctatctcctgagagcatgggagtgaagctgaagccgatcaagactcgaatagccgtggattactaacgcaggcaagatttcagcaatcagaatgaactgctttgcttacagctcagagaactgaagatagtcctgggctggttgaaatgttaccgtagagacgcaaagtttgttcatgtgtttgagtatgtaccctggcaaaaaaagcctccttttgttgta</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0196200, RefSeq:Os05g0196200