Os05g0196700

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0196700| Description = Conserved hypothetical protein| Version = NM_001061403.1 GI:115462536 GeneID:4338044| Length = 1502 bp| Definition ...")
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Gene Name

Os05g0196700

Description

Conserved hypothetical protein

Version

NM_001061403.1 GI:115462536 GeneID:4338044

Length

1502 bp

Definition

Oryza sativa Japonica Group Os05g0196700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5946911..5948412

Sequence Coding Region

5947257..5948264

Expression

GEO Profiles:Os05g0196700

Genome Context

<gbrowseImage1> name=NC_008398:5946911..5948412 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:5946911..5948412 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtccatggatcatggcggcggcggtgctggcctgctcgcggtggctgcggcgccggcgccggcggcggtgctgacgacgatgcatgggcgcgagctgtcgcactcctcctgctccttctcgtcggcggccgcgtcgctgtcgtcgccgtcgtcgtcgacgtcgtcgaggagctaccacgctgcgatgtccggcaagtcgctgtcgtgcgagagcatcccggagatcatggacaagcagtcgtccttctcctcctcggcgtcgtcctacgagagcttcatccagctcgaggcggccgacctcgaccgcatcaccgcggcggcggcggcgacgcgggcaccggccgtgcagacgatgatggcgtcgcacgagcagcagcagctcgccgtcgccggcggcagcggagggtatgatccgaagaggctcccgtcgtcgattttccggacggggtcgacgagctccggcggcggcggcggcggcggcgactggagcgtcgcctccaacgactcgctgttcagcatcaacctccgccactccggcgacctcagcgcgcgctacaacagcagcaaccacagcagcagcggcgacctcttctacgacgcctccggtggagggttccaccgcatcccctcctctacctcggccgccgccgccgccgccgccgccggcggcggcggcgggggcgggggcctttgcgtgagcggctcctgcgccaggtgcaccaccatcgccgccggcaagaacaggaagtccgtccggttcgcccccgacgccgagatcgtctccggcgagatcaccaacccctccgccgtcttccccacggaggcggcggcgccggcgacggaagggaaggaggcggcgaagagcccggacgcggcggcgcagggagggtggtgcctgttccgatgctgctggccgtcgccgccgtcggtgtggtggcctcgatgcgggtgcggcggcggctgcggcgtgttctgctgcggcggcgagaattgccggtgctaa</cdnaseq>

Protein Sequence

<aaseq>MESMDHGGGGAGLLAVAAAPAPAAVLTTMHGRELSHSSCSFSSA AASLSSPSSSTSSRSYHAAMSGKSLSCESIPEIMDKQSSFSSSASSYESFIQLEAADL DRITAAAAATRAPAVQTMMASHEQQQLAVAGGSGGYDPKRLPSSIFRTGSTSSGGGGG GGDWSVASNDSLFSINLRHSGDLSARYNSSNHSSSGDLFYDASGGGFHRIPSSTSAAA AAAAAGGGGGGGGLCVSGSCARCTTIAAGKNRKSVRFAPDAEIVSGEITNPSAVFPTE AAAPATEGKEAAKSPDAAAQGGWCLFRCCWPSPPSVWWPRCGCGGGCGVFCCGGENCR C</aaseq>

Gene Sequence

<dnaseqindica>347..1354#gtcggagctccatttctttggcttgttcatcctcgagctccggccattccccccccccccccccgtacccatgcccaccttcttcttcatcgatcgcaggtaagatgatgctgatctcgcgcaaagatttggtttctttttttcccaatttgtgttaacgctaatgttttctttgatttgtcgtgtccgttttgatattgatttgattggttttgttgtgtgaattgttttcagatcagcggcgtcatcgccgccgattgcgatcgtgatcaacaagggacggcagcgcggcggcggcggcgaacagaggaggtagcgatcggtgacgaccttgccggacgtgtcaatggagtccatggatcatggcggcggcggtgctggcctgctcgcggtggctgcggcgccggcgccggcggcggtgctgacgacgatgcatgggcgcgagctgtcgcactcctcctgctccttctcgtcggcggccgcgtcgctgtcgtcgccgtcgtcgtcgacgtcgtcgaggagctaccacgctgcgatgtccggcaagtcgctgtcgtgcgagagcatcccggagatcatggacaagcagtcgtccttctcctcctcggcgtcgtcctacgagagcttcatccagctcgaggcggccgacctcgaccgcatcaccgcggcggcggcggcgacgcgggcaccggccgtgcagacgatgatggcgtcgcacgagcagcagcagctcgccgtcgccggcggcagcggagggtatgatccgaagaggctcccgtcgtcgattttccggacggggtcgacgagctccggcggcggcggcggcggcggcgactggagcgtcgcctccaacgactcgctgttcagcatcaacctccgccactccggcgacctcagcgcgcgctacaacagcagcaaccacagcagcagcggcgacctcttctacgacgcctccggtggagggttccaccgcatcccctcctctacctcggccgccgccgccgccgccgccgccggcggcggcggcgggggcgggggcctttgcgtgagcggctcctgcgccaggtgcaccaccatcgccgccggcaagaacaggaagtccgtccggttcgcccccgacgccgagatcgtctccggcgagatcaccaacccctccgccgtcttccccacggaggcggcggcgccggcgacggaagggaaggaggcggcgaagagcccggacgcggcggcgcagggagggtggtgcctgttccgatgctgctggccgtcgccgccgtcggtgtggtggcctcgatgcgggtgcggcggcggctgcggcgtgttctgctgcggcggcgagaattgccggtgctaaaatttggcgggagattgggggcattgcgcgccaatgtagggcgatttgaacgcgatcttggttttgaatgtgttgcgatgttgttgaagtgaaccgaccagaatctgcgtgtatgtagacaaggtttttattatagagatatttggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0196700, RefSeq:Os05g0196700