Os04g0555400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0555400 |
|---|---|
| Description |
Similar to Serologically defined breast cancer antigen NY-BR-99 |
| Version |
NM_001060051.1 GI:115459831 GeneID:4336619 |
| Length |
3964 bp |
| Definition |
Oryza sativa Japonica Group Os04g0555400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:28190398..28194361 |
| Sequence Coding Region |
28190963..28190965,28191112..28191174,28191260..28191397,28191732..28192622,28192802..28192874 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:28190398..28194361 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:28190398..28194361 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcaagccttgctgattctttcttagcggatcttgatgaactttcagacaatgaagcctatcctgaggaagaaaatgctgaggcagtgggcacggaagagattggtgatgatgatatgcctgacctcgagtctcttaattatgatgaccttgatagtgtttcaaagcttcagaaaacacaacgttacaatgacattatgcaaaaagttgaaaatgcacttcagaaaggtacagatttttccaatcaaaggtcgatcctggaggaagatccagaataccagctgattgttgattgcaatgctctatcagtagatattgagaatgagatcattataatccataatttcatacgtgacaagtataggctgaagtttcctgaactagaatcccttgttcatcatccgatcgattatgctcgtgttgtccagaagattggaaatgagatggatttaacgcttgtagatctggaagggcttttaccttctgcaattataatggtaatttcagtgacagcatcaacgacaagtgggaagccgctttccgaggagaacttggtaaaaactattgaagcatgtgagagagcccttactcttgatgctgcaaagaagaaggtacttgaatttgtagagagcagaatgggttacattgcaccaaacctgtctgccattgttggcagcgctgttgcctcgaagttgatgggaactgctggtggtttgggagcacttgcaaaaatgcctgcttgtaacgttcagttacttggtgctaagaggaaaaatcttgctgggttttctactgccacatctcagtttcgtgttggctatcttgaacaaaccgatgtattccagagtaccccaccagctctgaggactcgtgcttgcagacttatagctgcaaagtcaactctagcagcaaggattgattcgatcagaggtgatccaacaggaaaagctgggcgtaacttgttagaagaaatccgtaagaagattgagaagtggcaagaaccgcctcctgcaaagcttccaaaaccacttcctgttccagactttgagcctaaaaagaagagagggggtcggcggcttcgaaaaatgaaagaaagatatgcacaaactgatatgatgaagcttgctaaccgaatgcagtttggtgtaccagaagagagctcattgggtgatggtttaggggaaggttatggcatgcttggacaggcaggaagtggaaagctacgcgtgtcaactgcaccaagcaaactttctgcaaaaattaccaagaaattcaaggagaagagctatggtagcagtggtgcaacatcggggctgacttctagtttggcgtttacaccagttcaggggatagagttgtcaaatccacaggcccacggcaacctgcttggaagtggaactcagagcacctatttttcagagaccgggacgttctcgaagatcaaaaggacctga</cdnaseq> |
| Protein Sequence |
<aaseq>MASLADSFLADLDELSDNEAYPEEENAEAVGTEEIGDDDMPDLE SLNYDDLDSVSKLQKTQRYNDIMQKVENALQKGTDFSNQRSILEEDPEYQLIVDCNAL SVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVQKIGNEMDLTLVDLEGLL PSAIIMVISVTASTTSGKPLSEENLVKTIEACERALTLDAAKKKVLEFVESRMGYIAP NLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLE QTDVFQSTPPALRTRACRLIAAKSTLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQE PPPAKLPKPLPVPDFEPKKKRGGRRLRKMKERYAQTDMMKLANRMQFGVPEESSLGDG LGEGYGMLGQAGSGKLRVSTAPSKLSAKITKKFKEKSYGSSGATSGLTSSLAFTPVQG IELSNPQAHGNLLGSGTQSTYFSETGTFSKIKRT</aaseq> |
| Gene Sequence |
<dnaseqindica>566..568#715..777#863..1000#1335..2225#2405..2477#2589..2691#2927..3002#3444..3551#agatttgggtcctccctcctccgcctcctccgccgccgccccctgtatcccaccggctcgccggagagtccgcctcgccgccgcggcctcacgggcgcgtatccagcctcgcggagagcgtgcggaaccgcgacccgtactagggcagcgcgagagagaagctgctgcgcctgcgctgcaaaggtatggctgttactgttcttccgaggggtctctaaatttccggcgattcgaagcttctaaagcatcccggatactgtatcctgtaggctgtaggtagattccgacagtggaagcgttagccgtccccttgcgctccgctgccaattggtagtctcagaatgtgtagatgcagcgtctgcttggggaatagggatgctccctatttgcgctagcctgataggacggcacttcagttgcaatctgatatcctgcttagtgcagaaaagccaaacatggcatgtgaagcgtagaaaatcagaagtaattttgtaacttctcttgctaggtctacagttggagctcttgctgctgcttggaagacttcggacaagaacctaagatcatggtgagttcataaattcacttcaggtcctgttaagtaaccatgtgcaagtttgtttactttgacattcggttctgttcaggtatgtttcttctgttctgtggtcatgtgtgatgtgttccatttttataaacagtgccattttacaggcaagccttgctgattctttcttagcggatcttgatgaactttcagacaatgaagcctatcctgtgagttggtttcagttactatgataatacagattttacaatgatttatttattgagaatttgttaactaatcatcaaatttcaggaggaagaaaatgctgaggcagtgggcacggaagagattggtgatgatgatatgcctgacctcgagtctcttaattatgatgaccttgatagtgtttcaaagcttcagaaaacacaacgttacaatgacattatgcaagtatgtgatcaagctcaaaatctcctttttcttgaagatggttttgtcctcttgttttaattggattgttgtttgacttctttcttctagttttctgattttgaagccctgtactgtcctattgtcacaagaaggctatttgcagtcaaacattaatgggtgtgttttagagtccaagacatgtttaactatatactcaatgttacaaatgctttgcgcaaaaagtacaatccttctaaatttgattctaaaggggactgtcatttgtatttttaggtaacaaagccttttgtttccatacatggcaacttacagaatcactctttgtttgcagaaagttgaaaatgcacttcagaaaggtacagatttttccaatcaaaggtcgatcctggaggaagatccagaataccagctgattgttgattgcaatgctctatcagtagatattgagaatgagatcattataatccataatttcatacgtgacaagtataggctgaagtttcctgaactagaatcccttgttcatcatccgatcgattatgctcgtgttgtccagaagattggaaatgagatggatttaacgcttgtagatctggaagggcttttaccttctgcaattataatggtaatttcagtgacagcatcaacgacaagtgggaagccgctttccgaggagaacttggtaaaaactattgaagcatgtgagagagcccttactcttgatgctgcaaagaagaaggtacttgaatttgtagagagcagaatgggttacattgcaccaaacctgtctgccattgttggcagcgctgttgcctcgaagttgatgggaactgctggtggtttgggagcacttgcaaaaatgcctgcttgtaacgttcagttacttggtgctaagaggaaaaatcttgctgggttttctactgccacatctcagtttcgtgttggctatcttgaacaaaccgatgtattccagagtaccccaccagctctgaggactcgtgcttgcagacttatagctgcaaagtcaactctagcagcaaggattgattcgatcagaggtgatccaacaggaaaagctgggcgtaacttgttagaagaaatccgtaagaagattgagaagtggcaagaaccgcctcctgcaaagcttccaaaaccacttcctgttccagactttgagcctaaaaagaagagagggggtcggcggcttcgaaaaatgaaagaaaggcaggccatctttaacctcctctttttttttctcaagcgaaaaacaaacaataaacattctcttatttaattgtgtgttctactaatcattcatatttctattggcctattggtgcaaacttggttcatcaaatgcacagttttgtatcttgtcgtaaagttggaacttgattctgcagatatgcacaaactgatatgatgaagcttgctaaccgaatgcagtttggtgtaccagaagagagctcattgggtcagtattggcatccccatttgaatgatgttttattgttttgtttcacaataaattatcatggagacttagatttattttcttaacataatcaaatattggtgtcatcaggtgatggtttaggggaaggttatggcatgcttggacaggcaggaagtggaaagctacgcgtgtcaactgcaccaagcaaactttctgcaaaaattaccaagaagtacgcaattttgcttctctttgttacctgtcatcttgttttagaatataaaacaaacacttcaagaacatgaaatacattcagtgtgattgcatgatagaagttgcagtaacccataggcactgttagtgttacgcctgctaccataatgcctctaattctctttacgtaatctgccaaaataccaatattttgaatattatccccttgattctgtattgctgtctgatatcagattcaaggagaagagctatggtagcagtggtgcaacatcggggctgacttctagtttggcgtttacaccagttcaggtaaattaaagattttttagctgtctcgtttgcttcaaagataaataaacggtatgcttaatctttagttgttttgacttgggtcatggaaaaggtagtacatgtaatttttgtttatcaatagcttcaccagtagaactcttctaaattaggtgtattctgctatgctgctggttattgcacagcttcgtggattttatgttgctattcttgtacggtaagttgggtactgcacaccattgcatggttggttttgtcttgaaatctgacgctgtatgttttgtaggctaatatcagagttgatatgcgcctgcattgtaacatatttgcaattacatcgattagtatttttaatgtaacttttcttttcatagttaactgcgtaggagtcctctcgtcattttgtttttctaatgctctattatttgttttatcgtccaggggatagagttgtcaaatccacaggcccacggcaacctgcttggaagtggaactcagagcacctatttttcagagaccgggacgttctcgaagatcaaaaggacctgagctgataagcaaaagtttcttcttcccatcagcccacagacccgtcataatcctcaggatgcaccgatgaatccattttgtaatgtactccaccttatacccgaattcagcagactttcgtggtgctgtttgcaatctctagaagttcgctaacttccatacggttcaagttaattcgacatgctgcgtttgatctgatgccgtctttgcgttcaacacaatttactgtttttggtaggtgattatcttatctgtcatctcatctttaaagtgtaatccctcttgtttcttacaaggtgctagttttgcgtctagaatttctgaaacaaagataagcatcagttggtgttcccaacttcccaatgttcccatcagtccgctatcaaggcagcgtacacgcaagtggattttac</dnaseqindica> |
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