Os04g0559100

From RiceWiki
Revision as of 19:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0559100

Description

Protein of unknown function DUF315 domain containing protein

Version

NM_001060073.2 GI:297603154 GeneID:4336643

Length

1998 bp

Definition

Oryza sativa Japonica Group Os04g0559100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28412226..28414223

Sequence Coding Region

28412226..28412505,28412607..28412723,28412832..28412986,28413082..28413156,28413252..28413548
,28413675..28414223

Expression

GEO Profiles:Os04g0559100

Genome Context

<gbrowseImage1> name=NC_008397:28412226..28414223 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28412226..28414223 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacacgccgtcgacgacgtgcgacgagagctcggaggtcgacgcgcgcgacgactacggggacatcgacgacgtggagcggcggcgcggccgccaccggcgggaggcctcgtcggacgtgtcgtccgagtgcagcggcgagcccgggagcccgtacggttcgccgtacccgcggtggcccgtgtgcagcatagcgaaggcgccgccgccgccgctgctgcagaagctcggcgcggcgcggcgcggcgcgggccgtgaccgcaaggccggcgacggcgagttgcagctgatcaaggagaggttctcgaagcttctgctcggcgaggacatgtccgggagcggcaagggggtctccaccgccgtcgccatctccaatgccatcaccaacctctatgcgaccgtgttcggcggctgccaccggctggagcccctgctggcggagaagaggtcgatgtggcggcgggagatggactgcctcctctcggtgtgcgactacatcgtcgagctcttcccttccaaggagatcatgcccgacggcaccgtgcgggaggtgatggcgaccaggccgaggtccgacatctacgtcaacctccccgccctcgagaagctcgacgacatgcttctcgagattctggacagcttccagaagactgaattctggtacgtgaacgacaagggtcagaaggatagctgcgccgccgccgccgcggcgccgtgccgtccggtgagccaccgcgacggtgacaagtggtggctgcccgtgccgtgcgtcaccaagcccgggctgacggagtcggcgcggagagacctgcggcagaagcacgactgtgcgagccagatccacaaggcggccatggccatcaacaatggcgttcttgcggagattcgcatccctgagctgtacaagcaaacgcttcccaagtgcgggcgggcgagcgtgggcgacctgatctaccggcacatgtcgttcccgggcaagttctcgccggagtacctcctggaccggctggagatctcgtcggagcacgacgccctcgaggcggccgaccgcgtcgaggcggcgatgcacgtgtggcggcggaaggcgagccaggggcactccaggtcgccgtggagcgccgtcaaggagctcatggagtccgacaagaacgtgatgctggcgagccgcgccggcgacgtcctgctctgcctcaagcagcgcttccccggcctctcccagaccaccctggacgccagcaagatccagtacaacaaggtaaccacaccaacccatcaccagcaacgacgtgtcgcgacatcatcgccatggacgaacactaacacgaagctgctgctgctgctgttctccgtgcaggacgttgggcaagccatcctggagggctactccagggtgctggagagcctggcttacaacatagtgacgtgtatagacgacgttcttttcgccgatgagtctgcaaggaagatctga</cdnaseq>

Protein Sequence

<aaseq>MDTPSTTCDESSEVDARDDYGDIDDVERRRGRHRREASSDVSSE CSGEPGSPYGSPYPRWPVCSIAKAPPPPLLQKLGAARRGAGRDRKAGDGELQLIKERF SKLLLGEDMSGSGKGVSTAVAISNAITNLYATVFGGCHRLEPLLAEKRSMWRREMDCL LSVCDYIVELFPSKEIMPDGTVREVMATRPRSDIYVNLPALEKLDDMLLEILDSFQKT EFWYVNDKGQKDSCAAAAAAPCRPVSHRDGDKWWLPVPCVTKPGLTESARRDLRQKHD CASQIHKAAMAINNGVLAEIRIPELYKQTLPKCGRASVGDLIYRHMSFPGKFSPEYLL DRLEISSEHDALEAADRVEAAMHVWRRKASQGHSRSPWSAVKELMESDKNVMLASRAG DVLLCLKQRFPGLSQTTLDASKIQYNKVTTPTHHQQRRVATSSPWTNTNTKLLLLLFS VQDVGQAILEGYSRVLESLAYNIVTCIDDVLFADESARKI</aaseq>

Gene Sequence

<dnaseqindica>1..280#382..498#607..761#857..931#1027..1323#1450..1998#atggacacgccgtcgacgacgtgcgacgagagctcggaggtcgacgcgcgcgacgactacggggacatcgacgacgtggagcggcggcgcggccgccaccggcgggaggcctcgtcggacgtgtcgtccgagtgcagcggcgagcccgggagcccgtacggttcgccgtacccgcggtggcccgtgtgcagcatagcgaaggcgccgccgccgccgctgctgcagaagctcggcgcggcgcggcgcggcgcgggccgtgaccgcaaggccggcgacggcggtacgtcctcctaccacccgcattgaggctggcaaagatctctgctgctttcttggcttggatattctccctaatgcgctatagatgggttgaattggcagagttgcagctgatcaaggagaggttctcgaagcttctgctcggcgaggacatgtccgggagcggcaagggggtctccaccgccgtcgccatctccaatgccatcaccaacctctatggtcggtacgcgtaatctcgttttcagagatgaaatcttcagcggcagctaggaacagagtagaacacgagcgtgctcaatgtcaatctgttgcttcctctgttcgcagcgaccgtgttcggcggctgccaccggctggagcccctgctggcggagaagaggtcgatgtggcggcgggagatggactgcctcctctcggtgtgcgactacatcgtcgagctcttcccttccaaggagatcatgcccgacggcaccgtgcgggaggtgagaatttgcaggtgttcgtccatgttcttcaaggcaaaagctctcttgcgcgtcactaatccatggacgcattcccgcctctttcgtctcaggtgatggcgaccaggccgaggtccgacatctacgtcaacctccccgccctcgagaagctcgacgacatgcttctcgtaagacccgattctgctcgcgctatgttcatctccatgactccatggattggcttcttgttcatcgtgaaattgctttgcttgttgccgtgcaggagattctggacagcttccagaagactgaattctggtacgtgaacgacaagggtcagaaggatagctgcgccgccgccgccgcggcgccgtgccgtccggtgagccaccgcgacggtgacaagtggtggctgcccgtgccgtgcgtcaccaagcccgggctgacggagtcggcgcggagagacctgcggcagaagcacgactgtgcgagccagatccacaaggcggccatggccatcaacaatggcgttcttgcggagattcgcatccctgagctgtacaagcaaacgcttcccaaggtacagcaacatcaaaaatctctctctctctctctctctctccccccttctctttctcgatacaagagcttcaaatcttccaattcgaggatttctcccaagaatctgaattctgatcctgtgcagtgcgggcgggcgagcgtgggcgacctgatctaccggcacatgtcgttcccgggcaagttctcgccggagtacctcctggaccggctggagatctcgtcggagcacgacgccctcgaggcggccgaccgcgtcgaggcggcgatgcacgtgtggcggcggaaggcgagccaggggcactccaggtcgccgtggagcgccgtcaaggagctcatggagtccgacaagaacgtgatgctggcgagccgcgccggcgacgtcctgctctgcctcaagcagcgcttccccggcctctcccagaccaccctggacgccagcaagatccagtacaacaaggtaaccacaccaacccatcaccagcaacgacgtgtcgcgacatcatcgccatggacgaacactaacacgaagctgctgctgctgctgttctccgtgcaggacgttgggcaagccatcctggagggctactccagggtgctggagagcctggcttacaacatagtgacgtgtatagacgacgttcttttcgccgatgagtctgcaaggaagatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0559100, RefSeq:Os04g0559100