Os05g0198700

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0198700| Description = REX1 DNA Repair family protein| Version = NM_001061411.2 GI:297604024 GeneID:4338052| Length = 2424 bp| Definition ...")
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Gene Name

Os05g0198700

Description

REX1 DNA Repair family protein

Version

NM_001061411.2 GI:297604024 GeneID:4338052

Length

2424 bp

Definition

Oryza sativa Japonica Group Os05g0198700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6117377..6119800

Sequence Coding Region

6117377..6117386,6117529..6117656,6118198..6118262,6118356..6118483,6119766..6119800

Expression

GEO Profiles:Os05g0198700

Genome Context

<gbrowseImage1> name=NC_008398:6117377..6119800 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6117377..6119800 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtttctttacagcaagctcaacatactactgcaagtcttgacacttgtgagcattctcctccgctccttgcgccgccgggacgagtcgtggccggcgatctccatcgggcgagcagagcaggggagaggatcatggtggcattctgttctccaaagagcagaaacatggttaatgcaataaaggggttgttcatctcctgcgatgtaccgatggcacagttcattgttaatctgaatgcttcaatgcccgcttcggacaagttcatcctgcacatgcttgaccctacacacatgtttgtgcagcctcatgtggcggagatgatcagagaagaagctgtagctactgaaagcttccctaaatag</cdnaseq>

Protein Sequence

<aaseq>MVSLQQAQHTTASLDTCEHSPPLLAPPGRVVAGDLHRASRAGER IMVAFCSPKSRNMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQ PHVAEMIREEAVATESFPK</aaseq>

Gene Sequence

<dnaseqindica>1..10#153..280#822..886#980..1107#2390..2424#atggtttcttgtacaaaacccacatgacattatacgaataatttgattcaagtgaaatatttgtattcagaagagttcgctcttttgctcttcagttcaatcatgttccttactacttcactaatgttcaactgccaatctaactattgtagtacagcaagctcaacatactactgcaagtcttgacacttgtgagcattctcctccgctccttgcgccgccgggacgagtcgtggccggcgatctccatcgggcgagcagagcaggggagaggatcatggtgagcatccacatcctctttctttctgattcatctctctctcccccattcccatcgggactagaatttgcttgcgttcgttcgttaaccctagcttctcttctagatcagtttgtttgttccccaaaaagttcccaagttggatccgcccctggacacgggagcacaatcactggccactacaatgttttgcatatttttgttagttaccaactttcggtagtggagtatgatttaaacttattgcctcttcaagcatagctcacacctttgtattatgtacctgtgtggtagcagtaagcaatttaagcataacttatttaggttggatgcttgtcattcattatatgatctcatctcataattatccttgttagaaggcagtaaggtttctatctccattatctcctcacttgcaatcttttaccgtgctttaaaagatcactgcatcactgttttagagtctgattgttggggaaggtttccagtacttctgattctccactgacatggctgtgtggtttgctgattaaatgatcaggtggcattctgttctccaaagagcagaaacatggttaatgcaataaaggggttgttcatctcctggtaaggtccttttacaatcgataaaatttagctcgtttttcttcacctctatgtagtttgcacaatcaactcataaatcctttttttttccagcgatgtaccgatggcacagttcattgttaatctgaatgcttcaatgcccgcttcggacaagttcatcctgcacatgcttgaccctacacacatgtttgtgcagcctcatgtggcggagatgatcagaggtaagatatcagagttcagagaccaaaacagctacgagaagccaacatgaaagatcattctaccccacagtaagatatcctgtgtgtacaccactgaaaagataccaacgcttgtctatggtttataatcgtgtgtgatgtgagcttcatgtgccactcatcaatcatgatgatgttcaagaatgataaacttgcagtatcagaaaatgttgtggcttatgacttaatgtgttttcagtgataataatcacctgtccatttggtagcgttggagcattgagagacagcatatttctgaagaatcagttaactttatgtgtattcatcttcctgttatgttcttatgtgatctataaaaacaaacgatgcaattgaaatagaaggttcaccagataatcaaaaactgtaccactaccaaaagtcaagagcatgaagcaggaaaggtgcaaattgtctctgaattcaggaacatggagttggaattttcaggcaatgggcgtcaatgcaagaagaaaacaaacgccgccccatccgccgctgcctcctgacctatcgtcttcaatgccggcccgtcactgctgttttcaccgtaaacacgtatggttttcactgcaaatactactactaatactccctactgagcaattcaggctatccacacagttgcgttactttacagatctaagatctaagggtctgtttggtacagttctaacttctaaatttagttctaggagttgagtctggagtggagttgtagagctgatctgctcctcctgcctcttttaatgatgaaaaggctgtgttcctcctagccatgataatttactcggtgaaagtgaaaacgggaaagtacaataagattgtgccaagtagaaagatggcgagctttctctctgctgtatgccatactagtaatgtatacttaagtacgtcgtgtattgtttgtcccattgcatttgcattccagcctctttggaaagctggtgccttgctagttgctaccattgcctacaggctacacgggaaggctaccctgcagagttcagagtaccaaactggcatttggagcctcaaaacttttcaggcatcctgcatgcattaatctttcggagcatttcaaccaaaaaaaaacagtttaattcatgtagtacagtagtgtacacatttgtgaaaagtttctaaggctaaggctctattggagggggcttgagattctttggagaaactatgccagagaatatatgcgagaatttggattgtttggtgcatgacattctagaagaagctgtagctactgaaagcttccctaaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0198700, RefSeq:Os05g0198700