Os04g0562500

From RiceWiki
Revision as of 19:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0562500

Description

Protein of unknown function DUF241, plant family protein

Version

NM_001060094.1 GI:115459917 GeneID:4336665

Length

1056 bp

Definition

Oryza sativa Japonica Group Os04g0562500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28554577..28555632

Sequence Coding Region

28554577..28555632

Expression

GEO Profiles:Os04g0562500

Genome Context

<gbrowseImage1> name=NC_008397:28554577..28555632 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28554577..28555632 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgggtaccgccgcaccatctcattcccggcgcccaggcccgccgccttcgcgatcggcgcgaccgcgagggacaagctggctgccgcgtaccacgtccgctcggccagcctcccctgccgcttccacccgctggtggtgcagctcgacgacgacgtcgcggcgctgcgcctggtgatcggccagtctcctcccgccgcgccgtccgcgtcgtccgtctcggcggcggcgtcgcaggtcgggagggtgctcgtgtcgctctcggagctgctgcaccacccgcaggcgcaggagccgctgcgcaggctcgggcggtccacgttcgcggagcggctgctcgacgacttcctccgcctcgccgacgcgcacggcagcttccgggaggcgctggtcgggctctccgcgctccaggccgagacgcgcgccgcgctccggcgcggcgatcccgcgcggctggcgtccgcggcgcgcgcgcagcgacgagccgggcgcgacctgccccgcctcgccgccgccgctcgcgccgtggtgagcaaatcacccgcgcagctaccggaggacctcccggccgacaccgcagccatcgcggccgcagtcgctgacgcgacgatcgccgtggcatccggctccgcggccgtcttctctggcctctcctccctctccaactccgccgccgccgcccgtgtcgaggtcgcctccacgccgtgctgggtcaccgccccggcaagactgaccgcctcgtcggacgaaccaagcaccagccaccatcgcatatggtgggtggccgacctcgttcgttggatgtcgcgcgccaaacggcgttccgccaagaaacaaaacgacggcggcggcgacgacggcgagtcgtccaccgtgcagctccgatctgagtcccgcatgaagccagaggagaaggcgcggagagcggcattcgagcgccatgagaacttagagcggtgcatcgccagcgtcgacagcagcggcgagaaggtgttccgtgctcttgtcaacactcgagtctccttgctcaacattctgagcccaagcttctga</cdnaseq>

Protein Sequence

<aaseq>MAGYRRTISFPAPRPAAFAIGATARDKLAAAYHVRSASLPCRFH PLVVQLDDDVAALRLVIGQSPPAAPSASSVSAAASQVGRVLVSLSELLHHPQAQEPLR RLGRSTFAERLLDDFLRLADAHGSFREALVGLSALQAETRAALRRGDPARLASAARAQ RRAGRDLPRLAAAARAVVSKSPAQLPEDLPADTAAIAAAVADATIAVASGSAAVFSGL SSLSNSAAAARVEVASTPCWVTAPARLTASSDEPSTSHHRIWWVADLVRWMSRAKRRS AKKQNDGGGDDGESSTVQLRSESRMKPEEKARRAAFERHENLERCIASVDSSGEKVFR ALVNTRVSLLNILSPSF</aaseq>

Gene Sequence

<dnaseqindica>1..1056#atggccgggtaccgccgcaccatctcattcccggcgcccaggcccgccgccttcgcgatcggcgcgaccgcgagggacaagctggctgccgcgtaccacgtccgctcggccagcctcccctgccgcttccacccgctggtggtgcagctcgacgacgacgtcgcggcgctgcgcctggtgatcggccagtctcctcccgccgcgccgtccgcgtcgtccgtctcggcggcggcgtcgcaggtcgggagggtgctcgtgtcgctctcggagctgctgcaccacccgcaggcgcaggagccgctgcgcaggctcgggcggtccacgttcgcggagcggctgctcgacgacttcctccgcctcgccgacgcgcacggcagcttccgggaggcgctggtcgggctctccgcgctccaggccgagacgcgcgccgcgctccggcgcggcgatcccgcgcggctggcgtccgcggcgcgcgcgcagcgacgagccgggcgcgacctgccccgcctcgccgccgccgctcgcgccgtggtgagcaaatcacccgcgcagctaccggaggacctcccggccgacaccgcagccatcgcggccgcagtcgctgacgcgacgatcgccgtggcatccggctccgcggccgtcttctctggcctctcctccctctccaactccgccgccgccgcccgtgtcgaggtcgcctccacgccgtgctgggtcaccgccccggcaagactgaccgcctcgtcggacgaaccaagcaccagccaccatcgcatatggtgggtggccgacctcgttcgttggatgtcgcgcgccaaacggcgttccgccaagaaacaaaacgacggcggcggcgacgacggcgagtcgtccaccgtgcagctccgatctgagtcccgcatgaagccagaggagaaggcgcggagagcggcattcgagcgccatgagaacttagagcggtgcatcgccagcgtcgacagcagcggcgagaaggtgttccgtgctcttgtcaacactcgagtctccttgctcaacattctgagcccaagcttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0562500, RefSeq:Os04g0562500