Os09g0534000

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0534000| Description = Conserved hypothetical protein| Version = NM_001070307.1 GI:115480356 GeneID:4347686| Length = 2622 bp| Definition ...")
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Gene Name

Os09g0534000

Description

Conserved hypothetical protein

Version

NM_001070307.1 GI:115480356 GeneID:4347686

Length

2622 bp

Definition

Oryza sativa Japonica Group Os09g0534000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21815400..21818021

Sequence Coding Region

21815459..21815905,21816963..21817889

Expression

GEO Profiles:Os09g0534000

Genome Context

<gbrowseImage1> name=NC_008402:21815400..21818021 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21815400..21818021 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagcagacgagccggccgccgccgccgcctccacctccctcgactccgacgactccttcttcgacgccctcgactccctcccttccccaccctctcctcctcacaccccttcctcctccaccctccgccgccgccgcccgcgccgcggatggagtctgaagcagcacgaggacgacaccgccgcatcacctacgttctctgattcatccaccatcaccgtcgtcgacgaggccgtcaagcccgactccgaggagacaagctcacaccgtcctcccccgcctcccgaggaggaagacgaggaggatgcggcggaggcggcggtggagggggaggtggagggggaggtggaggcgagggacgcgaagctaaatccggcaccggcaccggcaccgacgccgacgcctccgccgccgggcattctcgagtccctcgccatgctcgtcatcaaggcggtggtgttccaagtcagcgcgctcatcagctgcctcacgttcccgattcggctgctgcaatggtggttcctcctcgtgacggaccctctcggattggtgcggcgagcgagggggtgggcgctcgaggtggctgggcacgccacgggcgccgcggccgcgcgtctcggcggcggggaaggggtggggcgcatggtggcgaggctggcgtgggggtcgctctgggcggtgtacgtctgcgttgttctgtgctcgattctggttatggcgttcctcggaggagggctcttggtggggaaagttgtggaggagcccattcaggttactgagaccctgaattttgattacaccaaaccgagccccgtggcatttgttcctgtacagcggttggtgccgccgaatcagcggatgcagctcgaggtgttcctgacgctgcctgaatcggattacaaccggaggcttggagttttccaggtaagagcagaatttctatcagcagacggcaaagtgatctctacctcaagtcaaccatgcatgctaaagtttaagagtgcccatatgcacttcatagaaacttttctgcgaagcgtgtctcttttgtctggctattcctcagaatctcaggtcataagactaaaaatgaggggcattacagaggcttcagaaccagtaatgggaataaggataattcttgaacaacgagctgaatttagtcctggtgcaggcatcccagagatctatgccgcatcactaaagcttgaggcagaactacctctgctcaagagaatactctggaactggagatggaccctttttgtctggagtagcatggggttctttgtttttgaattattgctggcccttatttgctgtagaccctgtatatttcccaggagtggacataacgctgcaactccttag</cdnaseq>

Protein Sequence

<aaseq>MEADEPAAAAASTSLDSDDSFFDALDSLPSPPSPPHTPSSSTLR RRRPRRGWSLKQHEDDTAASPTFSDSSTITVVDEAVKPDSEETSSHRPPPPPEEEDEE DAAEAAVEGEVEGEVEARDAKLNPAPAPAPTPTPPPPGILESLAMLVIKAVVFQVSAL ISCLTFPIRLLQWWFLLVTDPLGLVRRARGWALEVAGHATGAAAARLGGGEGVGRMVA RLAWGSLWAVYVCVVLCSILVMAFLGGGLLVGKVVEEPIQVTETLNFDYTKPSPVAFV PVQRLVPPNQRMQLEVFLTLPESDYNRRLGVFQVRAEFLSADGKVISTSSQPCMLKFK SAHMHFIETFLRSVSLLSGYSSESQVIRLKMRGITEASEPVMGIRIILEQRAEFSPGA GIPEIYAASLKLEAELPLLKRILWNWRWTLFVWSSMGFFVFELLLALICCRPCIFPRS GHNAATP</aaseq>

Gene Sequence

<dnaseqindica>2117..2563#133..1059#aagggtgtaactgaaaaataccccgcccatcgtctctctcttctcccaccgttcacaattcctcttccccttcccacggaatcctcttcctccccatgctccgacgacgaccatccctccgattccccggccatggaagcagacgagccggccgccgccgccgcctccacctccctcgactccgacgactccttcttcgacgccctcgactccctcccttccccaccctctcctcctcacaccccttcctcctccaccctccgccgccgccgcccgcgccgcggatggagtctgaagcagcacgaggacgacaccgccgcatcacctacgttctctgattcatccaccatcaccgtcgtcgacgaggccgtcaagcccgactccgaggagacaagctcacaccgtcctcccccgcctcccgaggaggaagacgaggaggatgcggcggaggcggcggtggagggggaggtggagggggaggtggaggcgagggacgcgaagctaaatccggcaccggcaccggcaccgacgccgacgcctccgccgccgggcattctcgagtccctcgccatgctcgtcatcaaggcggtggtgttccaagtcagcgcgctcatcagctgcctcacgttcccgattcggctgctgcaatggtggttcctcctcgtgacggaccctctcggattggtgcggcgagcgagggggtgggcgctcgaggtggctgggcacgccacgggcgccgcggccgcgcgtctcggcggcggggaaggggtggggcgcatggtggcgaggctggcgtgggggtcgctctgggcggtgtacgtctgcgttgttctgtgctcgattctggttatggcgttcctcggaggagggctcttggtggggaaagttgtggaggagcccattcaggttactgagaccctgaattttgattacaccaaaccgagccccgtggcatttgttcctgtacagcggttggtgccgccgaatcagcggatgcagctcgaggtgttcctgacgctgcctgaatcggattacaaccggaggcttggagttttccaggtacattttgctgtttgtccttgtcagattgattttgcattggtcattcctttgataaaagggaaaatgatattcgattgaagcagtgtcgagtaaatgttgttagaaacccatattaacattctaaactgtaaaaatttatgacatagtccctgagcatacttcacaaatgagaagataccaactgttaactcagttgtgcactgagatgttatataatttgaagatttgaaatgtttagtgaaaagttagcaggattaaaaggcttatgtgttgttctgtagaatcggttctcaacaggggacattatgttttgagttttcactatttcactcagccgtagttttcttatgacaacctaaatatttttaggaacacaaaaggacatctataaagcatgatagttatactgttttttccctcaacttattactgtatcaatttaagacatgccaatagaaatttttttttgagagaccaatagcaaaacaaattatacactagaaaagatacaatcttacttctaatataatatgggtctcaaaggaatctggtggacatgtgacacctactctaaaatgttgatatctaacacaaaaaaaactttgccatacagatgaatcttgagcatgataggtgtggtgcatgtggtgtcactgcgttatgctgcaaatgctaattgttgggtaattgagtgagctttatgcagacatgtgttacactagcaacatggctaataaggcattgatagaggaaacttttctgtccataaggttgcgtagcgggacaatatggttatcaatgagagagttatgttaactttcattctgtagctcaaaggtccaatatcatgacggaacatataatttccctgctgtagcgtgtcaagggagcatatacccagtttaagttttctttaattattttgagttgagatattataaatgtttcatacgcatactttttggtctttcatattagataccctttttttagtaacatcgtgtttagcatgtctctattttcaatctgatttcccttctttcattgagtttaggtaagagcagaatttctatcagcagacggcaaagtgatctctacctcaagtcaaccatgcatgctaaagtttaagagtgcccatatgcacttcatagaaacttttctgcgaagcgtgtctcttttgtctggctattcctcagaatctcaggtcataagactaaaaatgaggggcattacagaggcttcagaaccagtaatgggaataaggataattcttgaacaacgagctgaatttagtcctggtgcaggcatcccagagatctatgccgcatcactaaagcttgaggcagaactacctctgctcaagagaatactctggaactggagatggaccctttttgtctggagtagcatggggttctttgtttttgaattattgctggcccttatttgctgtagaccctgtatatttcccaggagtggacataacgctgcaactccttaggctagctcatgtaatgtacacttcaaaataaatgcaaaagggatgttaatgttgcacgg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0534000, RefSeq:Os09g0534000