Os04g0572600

From RiceWiki
Revision as of 19:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0572600

Description

Conserved hypothetical protein

Version

NM_001060144.1 GI:115460017 GeneID:4336722

Length

5718 bp

Definition

Oryza sativa Japonica Group Os04g0572600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29239665..29245382

Sequence Coding Region

29239673..29239785,29241890..29242032,29242622..29242848,29242984..29243157,29243252..29243389
,29243857..29244116,29244223..29244334,29244817..29244999

Expression

GEO Profiles:Os04g0572600

Genome Context

<gbrowseImage1> name=NC_008397:29239665..29245382 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29239665..29245382 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagataaaaaggttacgactggaatttattgtaagagagattattgaccaatacaacaccttaagaaaacagttgaacaatgcgatcccttcagtttctatttcgaacagcaaatgttctgtaggcaatgagtgtgtcaagaatcagacctgttgcgtcactatggtagtacaggtggaaattaactccatgtcgcaattggacgttatcaaggaacgggtgattccaagcatcctggccacactgttgaaaggatttttggaatttaagaatgttaaggtgcaatgtcaagaggataatgaacttgttctgaaagtcggtatgtctgagcattgcaagagtgggaagttctgggctaccctacaaaatgcttgcatcccaataatggagttgattgattgggagcggagccgaccagagagagtatatgataatttctgctcatatggcatagactcagcatggaaattctttgtcgaatctgtaagatccacaacagatgctattggaaggaatatccatcgacagcacttactggttgtggcagactgcctatctgtgagtgggcagttccatgggctaagcagtcaaggtttaaagcagcaaaggacttggttatcaatctcctctccattttctgaagcatgcttttctaggcctgcacacagttttataaatgctgcaaagcgagattcagtggacaatctttctggtactctagatgcaattgcctggggcaaagaaccttgtgcagggtcgtcaggtcctttcaagattctatattctgggaagtcacatgagacaaaacaaaatgagcacatatatgactttctacataaccctgaagttcaggctcttgaaaagaatgtaatggatacctacagaaaaaggactgaaaaaacttccaagcggagatcagcactcaattctgaaggcaatgctaccatcaatggtggtgccatatcttttaatcagaagtttcttaatgctaaagttggtatatgggagaacatcattgacatgcgcacttccttgcaaaacatgcttcgggagtacacattaaatgaagttgtcacagaacaagataaatcatgcttaatggaggccttgaaatttcatcccagagggtatgacaagattggtgtgggaataagagaaatcaagatcggagtgaatcctggtcacccgagctcaaggtgcttcattgtactaaggaatgatgatactactgcagacttctcttacaacaagtgtgtccttggtgctgcaaattctatctcacctgaacttggaagttatatagagaacagacgatctaatagagcagttcggccacatcagttgtag</cdnaseq>

Protein Sequence

<aaseq>MKIKRLRLEFIVREIIDQYNTLRKQLNNAIPSVSISNSKCSVGN ECVKNQTCCVTMVVQVEINSMSQLDVIKERVIPSILATLLKGFLEFKNVKVQCQEDNE LVLKVGMSEHCKSGKFWATLQNACIPIMELIDWERSRPERVYDNFCSYGIDSAWKFFV ESVRSTTDAIGRNIHRQHLLVVADCLSVSGQFHGLSSQGLKQQRTWLSISSPFSEACF SRPAHSFINAAKRDSVDNLSGTLDAIAWGKEPCAGSSGPFKILYSGKSHETKQNEHIY DFLHNPEVQALEKNVMDTYRKRTEKTSKRRSALNSEGNATINGGAISFNQKFLNAKVG IWENIIDMRTSLQNMLREYTLNEVVTEQDKSCLMEALKFHPRGYDKIGVGIREIKIGV NPGHPSSRCFIVLRNDDTTADFSYNKCVLGAANSISPELGSYIENRRSNRAVRPHQL</aaseq>

Gene Sequence

<dnaseqindica>9..121#2226..2368#2958..3184#3320..3493#3588..3725#4193..4452#4559..4670#5153..5335#aggaaacaatgaagataaaaaggttacgactggaatttattgtaagagagattattgaccaatacaacaccttaagaaaacagttgaacaatgcgatcccttcagtttctatttcgaacaggtaactgcagaaactatttgtgctatgcatgattatcgtgtccatcaactgcctccctgttttccttacctgaaaaagaagcagcaaagtacagaagtacctgatcttctcctaaatgctcaagttactaattgagcttacactgagaaaaattctgggcatgtgtattatatttatttggcatattgtatggtactacctctgtcccaaaatataacaacttttggctatgaatctggacaagtaattacttggtcaaaagcattaatttataatagtgcatgcttcatttcttttgttaagcacataaacctgcatgattcaaaaggggaaaaaggatatgtgcttatatgggtatctattattatcattattgaaacagtataaatcagccttgcatgcaaaacaacgtcagcatcaattggatgtatatatgtactattatagtgttgagtgcagaatattattctactctctgactgaacctacctaggcatccattcatgccccgatacagatcaagaaaaattacccactggatcatttggtttttacttgagtaaaaactgagcttttttgcatcccccccaaaaagagcacttttactcactgattcatgttatttttactgatttatggagcaagggcatcttttgagaacattatcctatacctcataaaaaacggttactttgtgaatggctaagggtgggttgtgaagttagcttgtgggtttgaatcctgtttcgcaaattaaattacagtaatttttcgcagatgttttcaattatctgtagtgaaactcttcacttgaagatggaaaataaatctgggaagctagggaaaaacctgggcacgggtaggtggtgtgtgtgagtaaaatcctagtgcaaaaatagtaaaacatatctggaagtggaaagcaaaatccgtgacctaatataaagctattctaaacataggagtacaaatgtacagtgtgctactctgtgtgtgtgtgtgtgtttacatattgaatactgctatatttcaattctgcgaggaactcggctagttattacacatctacccagcaagaataaatcaaaatattaaactttagggtaaaacgaaccggtgataccacaatttgtgaagtggattctagtttgtcggtcatcttacaagttgatcaaacaagtccccaacttgattgctgagtgcaaatcgagtcaaacacacaccacataagctaattacgctgacaatagatgctagcgtagtgtgagactgtgagtgccagcagcatgtgatccacggacccaaaggtatgggtgttatttttgcatactcaaaaagaagtcaaaggaacatggtgctcctctcttctattgaatggtctgttgtcctcccgccactctgcactatacatcaaacactgccttcttgttcaagcaggctgtggattatgtgctgcttacatggcaccctcaggttaggctggtgttggtgttgctgaaagtaaccccccatggcattgttttgaacttgatttgcaagttgcgaccacactaatcaagttgtgtgactagctgatcagtttgtgaaaggagcgactaacttgcattttactctggagtttttttcccccatctagtattttctatttcattaatttattagggtaacttacagaaaataaaataagttcaggataataattctagatacatcagtgctgtttctgtacattgatggggaatcccacataagtaacaacccaaacaaacaatcatacacaagtgttattaatattttacttactgaaattccttcaatagcattgttgtctatatttaaattgcactatctgtttacctccagctattgctgcgctgcctgagtaacatttacgcataaattctttcatctaatatatcaataagtaaatgtgacctgtccatgaagctcaaacaactatatttgttttagcacaaggcatcgcagctgattctagaattatgtgtgcatatacatgtttcatgctgttatgcctgtagctatcctattctctttctagttcccatgggccatgacatatcatttggcattctataccctgcagcaaatgttctgtaggcaatgagtgtgtcaagaatcagacctgttgcgtcactatggtagtacaggtggaaattaactccatgtcgcaattggacgttatcaaggaacgggtgattccaagcatcctggccacactgttgaaaggttattatgttttgatggattttttccccaaaaaatcttctcaatgttctagggaactcctcagtaggatcaaaatccaagtttgtcactaataggtcaatagccatctaactacagaagaaagtgtttcatgcaaatgtactacttgttgtatgctagatataccaagtttatgcatagctctgagttattttaatactctttcaaaggccattcttgttgtaataacttcacatatcattatattattgtttcacaaatatgagaaaaaggtatcataaaatgtataaaggggcttttatgactgattatttggttgatttggttagcaaaagtaagtctagttctaactcgcagaacccattgtccattgatccactcacatgatagaactcaagctattgcgtgatctttttagactgaaaacacattatattgaatgagtagtcaaaacaaaatatatgagttggcttctctgggttcaccatgggggctatgcttttcaaattatagttcatcatacttgctgctggtgcactagtatgcagataaattttgatgtacgctgcttgatttcctctgtttgcaggatttttggaatttaagaatgttaaggtgcaatgtcaagaggataatgaacttgttctgaaagtcggtatgtctgagcattgcaagagtgggaagttctgggctaccctacaaaatgcttgcatcccaataatggagttgattgattgggagcggagccgaccagagagagtatatgataatttctgctcatatggcatagactcagcatggaaattctttgtcgaagtatgatacttgctacccttcattctggcttcactgtttcattcattcctgtgtaaaatggtttcaaagtttaattgtttgtgataaatttctcctgtaggtttataacattttcattttcacttgctttttcagtctgtaagatccacaacagatgctattggaaggaatatccatcgacagcacttactggttgtggcagactgcctatctgtgagtgggcagttccatgggctaagcagtcaaggtttaaagcagcaaaggacttggttatcaatctcctctccattttctgaagcatgcttttctgtgagaaatcttagctttcttactgattattaactatgagatttcccttttgaaatgttctgaacatcttctgattttatggcttttcctgcagaggcctgcacacagttttataaatgctgcaaagcgagattcagtggacaatctttctggtactctagatgcaattgcctggggcaaagaaccttgtgcagggtcgtcaggtcctttcaagattctatattctgggaaggtgtgtattgtaacttccctgctgaatcaagcactactcttttagagtaactttaacgtgctcccaaaatgaaaagaaaattgagatcttgatcaatcaccccctatgaatactcacgatgcattatacatgcacaatttaactctttggatagcataaaggtacaatactaaatttctttcctaatgctttgcctacgagcctctaatgggctgcaagctagagaaatttgcattgagtaagtattcactgaaataatttgttttctggttctgaataattgatataaaatgaagtgaagatcttatattatctctatgatgttcatattatttatgctgagctgttgattgatgatattccgttacattaattttgtacagaaattgaatcgcagtgcctgcttctgtgatagatggatgttcagatatttcaaattggctgctaacatttattcttttttgcagtcacatgagacaaaacaaaatgagcacatatatgactttctacataaccctgaagttcaggctcttgaaaagaatgtaatggatacctacagaaaaaggactgaaaaaacttccaagcggagatcagcactcaattctgaaggcaatgctaccatcaatggtggtgccatatcttttaatcagaagtttcttaatgctaaagttggtatatgggagaacatcattgacatgcgcacttccttgcaaaacatgcttcgggagtatgttataccactatccatggaatcgtgactgatagtcatcttcttttttaaaaaaaaagctttataatccttggtattgatgtcatcttctactttcatgaaggtacacattaaatgaagttgtcacagaacaagataaatcatgcttaatggaggccttgaaatttcatcccagagggtatgacaagattggtgtgggaataagagaaatcaaggtaggtacatagaatgcaattttcctttatggcatagccctcgtcttttctataatcctacaaatatcaattgaaattttcattgatcacaaaccgcattaatattttctctaatggctcaaagaataagaatatttttcttcatgcttatgtatgttatattctcggttttaacatgcaagtgccggtagtgaactgtccaattaacgtggtaggtttgggggttgtgctcatataattcggaattagggtactattattgtaatatttccaagcactgttaacttcttgatgttgaagaaagataatacctcccccccacgctgactgcacaatttatgtcgagcttgctgttagcactgatgaattcctgctttataaccattgctttttttatacgtgatatcaaaagcatcccgcgttatgattattcttcattctagcatgttctgatcaaaacatatgttgtgtgccacatacagatcggagtgaatcctggtcacccgagctcaaggtgcttcattgtactaaggaatgatgatactactgcagacttctcttacaacaagtgtgtccttggtgctgcaaattctatctcacctgaacttggaagttatatagagaacagacgatctaatagagcagttcggccacatcagttgtagggtgagcccgtcaatgctttacgaacaagtatcagaagcaattttcatggataacgatagattggcgaatgttgcttcttggctgcttcggttaacggggatggcagggtcttacactctacagggatgtgtgtcaactcaactcaactcactcgagctacagatggccgacctgagccttagtgtaggtttcatgccttcacttctgtagcacatacatctatagtaacccttaagtttgtttggacaagaggtagtggcacaaagtgcaataggtgtcgtcgttatccttgcatcaattgtatgcggaaatgatccatattctaaatgagaatcacaaaattttggtcgttgaatttaatctagaatgtgatttattcgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0572600, RefSeq:Os04g0572600