Os04g0577000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0577000 |
|---|---|
| Description |
Ubiquitin fusion degradation protein UFD1 family protein |
| Version |
NM_001060164.1 GI:115460057 GeneID:4336742 |
| Length |
4131 bp |
| Definition |
Oryza sativa Japonica Group Os04g0577000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:29487327..29491457 |
| Sequence Coding Region |
29488056..29488058,29488703..29488780,29488897..29488921,29489014..29489046,29489117..29489238 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:29487327..29491457 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:29487327..29491457 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgttttatgcaggatatggctaccatgggagtaactttgagcaaacataccgttgttatccagcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccaccatctgctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttgagttgcataatgatgcaactcagcggatttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactggatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaacccttcccaagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatccgaaggccatcctggagaaaacactaagaaagttgtcttgtataaccaccggcgatagtatcatggtagcttacaacaacaaacaatactacattgacattgttgaaacaaaacctgcttccgcagttagtattattgagacggactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaaatccgcagcaaccatcagttcctgcaagtgaggcaactgctgaagatgaaaatgctaaagttgaagatgaactgaaattcaagccgtttactggttctggaaagcggctggatggtaaagcctcaaagctacaagcaacagaggtcccttctgcctcacgttcttccccttcagactcaaacaaaagggtgaatcaggaaacgttagcaccagcatcttcaggagctagcaactccacacgccagaaatcaggaaagcttgttttcggttcaagtgcaaacaacaacaaagaaccgcaaaaggcttccgttaaggatgatgagtctccaaagaaggacgagcccaagttccaagcatttagtgggaagagctactccttgaaacgttag</cdnaseq> |
| Protein Sequence |
<aaseq>MFYAGYGYHGSNFEQTYRCYPASFFDKPHLEGGDKVIMPPSALD RLASLHIEYPMLFELHNDATQRISHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRV KNTTLPKGTYVKLQPHTTDFLDISNPKAILEKTLRKLSCITTGDSIMVAYNNKQYYID IVETKPASAVSIIETDCEVDFAPPLDYKEPENPQQPSVPASEATAEDENAKVEDELKF KPFTGSGKRLDGKASKLQATEVPSASRSSPSDSNKRVNQETLAPASSGASNSTRQKSG KLVFGSSANNNKEPQKASVKDDESPKKDEPKFQAFSGKSYSLKR</aaseq> |
| Gene Sequence |
<dnaseqindica>730..732#1377..1454#1571..1595#1688..1720#1791..1912#2013..2143#2240..2466#3173..3429#3857..3943#gcctgtcgcctcgactcccggacgtctcctcggcgagttcgcccgccgcctcgcctgcgtcgatctccatcgccgccggcgtctgctgcttccgccgcatcctcgctcgctggtgagcaatccatctgttacgcgcatcctctttctcatctctctctagccacacttttacttgcgttagccgttagccctaccttcacttcacttctagatccggaagcctttttgtcttaaccctagtaccagtaacagcttagtttgttcgcaagaaaatttggggggttcaactaagccctcatgcccccacgttaggtcctcccctggcttgattttttttttttagataatggataatctggattgtgcagagtgttgagaagttctgtggctctgatggtgaggctatgtgatatcgaatggttttgtattatttttgtcttttcaatgaaatttgttttataagcaagcagactgctcaagaatggccctcagtgtctatgcaccaccagcagctgcaatgcagaggcttgctctaggcatatagttatcatatttcgtgcttacaacccctaattgctttgttacattagcttttttaatcttttgctccaccctattgcttagtacatagtaacatcctctaccacagattaaatagccaccttttcgcttttccatccttcgtaggttacgagcctgggagaagttgaggcaaagacctgcagcaaaatggtatgcatcacttgttattgccattaaaatttattgattttttgtgtcgcaatttggtgcatgtatattatgcttgctgggttatttctcccgcatgtggaatttcttctagactagagaaatcacctaatatatgttgaaagttcatgtttacacctaaaggaaatgtgtactctcatgttgtctaaggggatcaagtggaacaagagcaggtaataactagtcttatcagaaaggatctctttggaatttgaaatatattagtcattgctacatgtttaaaaatactggaacttcctggtgtattattgctggctgaactatggaatagttagccccaaaaatgaagttcatagtgtacacacaatacacaatgttttcctgagattatcccctagcaacatcacactgcaataaaattccctctggtgtttgcatttctatttttcagtcctgtttgtaactttgtatatcttatgtttcgttccttcctcatccttacctttctactgagcttttcaatttaagagatgccaaagataaaaatcactacttattcttctgtgtgtgtgatgcttgtcttttcaggttgcactatgtaattggcataagcttaactaatccttttatttttgcttctgcagttttatgcaggatatggctaccatgggagtaactttgagcaaacataccgttgttatccagcatctttctttgacaaggtatccttctcccctgtgctgttattgaaatatctagcattgttttatccttttacatgatgaactggatttaactgtcttttttttccttttttttttttgcttcatttcttcagccacacctggaaggtggcgacaaaggtatgtcttcagacccctcccccctcctctcacacacacaaacaattcaaaccgcatgccactgacattatattttatcatcatcaatgcagtaattatgccaccatctgctcttgatcggcttggtaagctcaatctcagctcttttatactctggccttagatttacattaattgttttggctcctctaacagcttctctgcacattgaatatcctatgctgtttgagttgcataatgatgcaactcagcggatttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactgggtatgtaatatgcagtggattttctttactgatatctgcaattatattccaaagaaacatattgactgatttatgctataattctttcatatatgtgcagatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaacccttcccaagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatccgaaggccatgtgaggatatgataaaaacgctccattattaaaaccattccgtttcttggggaaatcatcattctaatgataatgctttgctttgtgacattgcagcctggagaaaacactaagaaagttgtcttgtataaccaccggcgatagtatcatggtagcttacaacaacaaacaatactacattgacattgttgaaacaaaacctgcttccgcagttagtattattgagacggactgtgaagtggactttgcacctcctcttgattacaaagaacctgaaaatccgcagcaaccatcagttcctgcaagtgaggcaactgctgaaggtttgtctttagattaagtgcactttagttttcagatgaacttgtattgaaaggctgaattttatcctcctcttctatagcaatttttcaagtgtgctgccatctgggagcatgtactccacaccctgaactagtattttcatctactcccatagtcctgtattttgcatagtaaactgcaacataagttaaacaaagaacaatagaaggaaaactagaactggaagacatgcttgaatcaaagacgtcaagcactctgtccagtggtgtgaagtggcactgttctggattgcttggttttggggttgacagcctttctgtcaacttcttgtatgctactagtttgtttactgggttgtcagcctttctgtcaacttgtattctatggtttgcttctttcttactaaaattcagccggtcatatttggcttgcctggctaaaactacataaaaaaaattcattctttttcatgcttatgtattgaaattctatataaggtgtattttcgtcatatcaagtgtgaacgatctgcaatgttaacgtttctataaaagaaaatatgcgctgttaacatgtattccacatgcatgtttgcatatgtttatcaagtgcattcaatacaagattccagctgccaaggtgtgtagtggtggcatttttgaatttctccttttaaaactatccttttggcgaccttcccaccagatgaaaatgctaaagttgaagatgaactgaaattcaagccgtttactggttctggaaagcggctggatggtaaagcctcaaagctacaagcaacagaggtcccttctgcctcacgttcttccccttcagactcaaacaaaagggtgaatcaggaaacgttagcaccagcatcttcaggagctagcaactccacacgccagaaatcaggaaagcttgttttcggttcaagtgcaaacaacaacaaagaaccgcaaaaggtattacatttttctcgcacttgaacaccctcctttcccttcttttcatgcttcattttttccctactgaatctgtttttttaatctaataaatgcgttactaaatgtgaataaatttgcaagaatgatgagcttgttttctctgcatatgttcacagaatcaccggccaggatggccagctaattgaagggttaaccttataaattctatgtattggccttttgggcgacaaacagaggatgctagccggaacttagattcatctatgatctagaactcaaatatatttagatattttttgttctgtcagttgctttcctagttagtgagcagagttttgattgagtggaatgacatgtttatgctgcctgcattatggatatgccgactagttattgattcttttttttttttttttgtgaacaggcttccgttaaggatgatgagtctccaaagaaggacgagcccaagttccaagcatttagtgggaagagctactccttgaaacgttagctggattttgtagccttaacttttggaatgagccatcctaattcacttggtgaatgtgtggggccgtctggctactctagcgtagacaaatgcgtatattcacttttcatactatgaaacactagcatgtatatccaaattaaactatataaatgctttagcgtgatggaaatattgcatttacagtt</dnaseqindica> |
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