Os04g0583500

From RiceWiki
Revision as of 19:58, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0583500

Description

Similar to Expansin 4 (Fragment)

Version

NM_001060198.1 GI:115460125 GeneID:4336776

Length

3416 bp

Definition

Oryza sativa Japonica Group Os04g0583500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:29883652..29887067

Sequence Coding Region

29883773..29883920,29884195..29884510,29886491..29886800

Expression

GEO Profiles:Os04g0583500

Genome Context

<gbrowseImage1> name=NC_008397:29883652..29887067 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:29883652..29887067 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccctgcctcctcctcgtcctcttcctcctcccggcgctcgccaccggccaccagcacccgtccaccctcggctcctccgccctctccgagtggcgctccgccaaggcctcctactacgccgccgacccggaagacgccatcggtggcgcgtgcgggttcggggatctggggaagcacgggtacgggatggcgacggtggggctgagcacggcgctgttcgagcgcggcgcggcgtgcggcggctgctacgaggtgaagtgcgtggatgacctcaagtactgcctccccggaacctccatcgtcgtcacggccaccaacttctgcgccccgaacttcggtctccccgccgacgccggcggcgtctgcaacccgcccaaccaccatttcctcctccccatccagtccttcgagaagattgcgctctggaaggccggcgtgatgcccatccagtaccgccgcgtcaactgtcttcgtgatggtggtgtgcgattcgcagtcgctggtcgaagcttcttcctgacagtcctaattagcaatgtcggtggtgctggcgatgtccgatcagtgaagatcaaaggaacggagtccggttggctctcgatgggccgcaactgggggcagatatggcacatcaactctgatttcaggggacagcctctctccttcgagctcacctcaagtgatggaaaaacattgaccaactacaacgtggtccctaaggagtgggacttcggcaaaacatacactggcaagcagttcctgctctag</cdnaseq>

Protein Sequence

<aaseq>MAPCLLLVLFLLPALATGHQHPSTLGSSALSEWRSAKASYYAAD PEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSI VVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLR DGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFR GQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQFLL</aaseq>

Gene Sequence

<dnaseqindica>122..269#544..859#2840..3149#actatagccaaagcaattcacactcgcacgggctcgagacggcagcacagctccactccactccactctcccccaccacaccacactgcactgaggcataccgacgaacacctttggagccatggctccctgcctcctcctcgtcctcttcctcctcccggcgctcgccaccggccaccagcacccgtccaccctcggctcctccgccctctccgagtggcgctccgccaaggcctcctactacgccgccgacccggaagacgccatcggtacgcatccaaagctagctggctctctttggtcatctctgcatctaggaacgaatctgtccttgcgcttctttaattctccataactacccctaaggccatggaagatttctcttcccgcatgtcccgcggacgaaatttccctcaaagccgcacgctcggttacttgaattatctgcgcgtacggttggttcttgaattggttgcttcctctatcatggtttcatccgtaggagcgtgcttgatttgtgccgtgctgttgggcggattacaggtggcgcgtgcgggttcggggatctggggaagcacgggtacgggatggcgacggtggggctgagcacggcgctgttcgagcgcggcgcggcgtgcggcggctgctacgaggtgaagtgcgtggatgacctcaagtactgcctccccggaacctccatcgtcgtcacggccaccaacttctgcgccccgaacttcggtctccccgccgacgccggcggcgtctgcaacccgcccaaccaccatttcctcctccccatccagtccttcgagaagattgcgctctggaaggccggcgtgatgcccatccagtaccgccggtacgttcgattcttggctgcatcctttgattgctgctatctttagtctactttgcactggattctagactagatctgaggtttatgtttcccattttcttaatccactttgtgtggaaatgtgaaagtgcttagaattgcgtcggttggtagaatgtgggatcccagaaaagctgaattataagtggccgttgtggaggaaaggaaatgggccgtcttccaatacggtcaacttctgttagagcacccgcaatggtaaagtaaggtgctctctataaaacatgtacatctcagcaatagactagattaatagtaaaccacctcaatagtatgtctacatgggtatctatagctctctaatgcattgcctcgtttttctctatagactatctccaggttagtagatagctttgctctctctcttcatttaatctcttcaatgtaggaaaatatgctgacatagatatcttgtagagagcctatagataaccattgcgggtgcccttagggttcagttggatagtttcatggtcctttatgctgtagtgtgtttaggtgtctaggttaggagaaaaaagggcagtacttttaaagccttcagccatttgatgcaccattttcgtaagtactgttagagttctaactgtttcagttgatttgcttctggctcagcagcacaagaaactggtttccaaaaaaaaaaagcagcacaagaaacttggtgtatgcttcagttaaaaattcatatagtttggaataatattttgctggttggaattaaaacgatgcaacttacatgcaccattgatcagaaaactagcagtaacttactattgtcatctaaatgtcgctcgtgagaattcatttattccattactctactagtttaaggttgctagctagaatccggaggctgtgagctatggacctgcaggtaacagcaactcacaccgaatttatgcaaacagccttcctcatatctgagttagtttacgaggttttcccaggctaatcctaataatcaagactcaaaagtacacagttctgggtaatttccagcagtttttttaatctgtatcggtaggcactaaggaatgttagtctgctccattacatagaccgttttccatcacgcttaattcctttctggggtacattagatgttcctttaagctttcaatgaccactaagttagtcccacaggttgaattgctgcattatttgtggactgtagctgtccttaatttgctttctgtactagcaatttataccggttggtatgtctttcaagtccttcaataatttgatctgttatcaaaactaaaatagtgttaaacagatcagttcatagtcaggcattatcttttcctgcactagatttttcttcacatcttagtgctctagatctaaataggttacaatcttccagttgacgtctgtaaattagtgtacgtcatttctagtaatattcaagaattaattttacgaaccccctaatgtgatgctgaattaggttgcctgtattactttctcaaatattctgaggtatagttgagtaatgcaatatccattatgtgcgtttaagttggcatcaaatgtgcgtctaagttggcatcaattagatgttcaacttcaagatggtttcctgaatatcatactgtcatatttatgtgcctatcatacttcctcaagatcgatgttccaggacattttgtagagaacatcaacctgcagcgcttttaaattatttcaggcttcaccatatgttacagggctcagttgttggcaggatttccatgagagtgacaatctgtttgaacggattgtttcactgagcagtgaaccatcacaaggacagctgtacaaggctatcagtaacatgatagcctgtagatagaaagcaaaattattgtagattgtaaattggtcagcaaaaattgtcaattgtcactaatcttggcgtgtttaatttgtatgcagcgtcaactgtcttcgtgatggtggtgtgcgattcgcagtcgctggtcgaagcttcttcctgacagtcctaattagcaatgtcggtggtgctggcgatgtccgatcagtgaagatcaaaggaacggagtccggttggctctcgatgggccgcaactgggggcagatatggcacatcaactctgatttcaggggacagcctctctccttcgagctcacctcaagtgatggaaaaacattgaccaactacaacgtggtccctaaggagtgggacttcggcaaaacatacactggcaagcagttcctgctctagagaggaaagggtaccaatagcagcttacagttacaaatttttttctgatcctatgagttggattgtactattgtatattcctctgaggaacgataatagtatcattagagaaagaaatgtttagtgcagagcctccaatagtagtccaacatagaaaaggtgctcataaatgtggcatgtaccatttggaactctgataattgcactacagaggcttgatgtaccattcaaaatagaaggctgtacctgttgtctcgattgtatggt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0583500, RefSeq:Os04g0583500