Os05g0207700

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Revision as of 10:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0207700| Description = Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)| Version = NM_001061437...")
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Gene Name

Os05g0207700

Description

Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1)

Version

NM_001061437.1 GI:115462604 GeneID:4338080

Length

5366 bp

Definition

Oryza sativa Japonica Group Os05g0207700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6648559..6653924

Sequence Coding Region

6649483..6649710,6650133..6650265,6650422..6650680,6652840..6652975,6653398..6653916

Expression

GEO Profiles:Os05g0207700

Genome Context

<gbrowseImage1> name=NC_008398:6648559..6653924 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6648559..6653924 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgagcggcggcggcggcggcgacgactacaagcgggaggagtcggtggcactcatggtcatcgtctccctcgcggcgctctccctcctctccctcgtcgccgccttcgcctactactgctacatcacccgcaaggtctcccgccgcctccactcgctcgacctccccaagcaccaccgccgctcctcctcctcctcgcctcctcccatgcccccgccgctgcctccccctcctccttccgcgaatgccccgacgctcgggaaggagagcccgtctagcaactccgccagcgacggcgcggcggcggcggtcgtggtcggcggggagaggggggccgtccaggtgttcagctaccgccagctgcacgccgccacgggcgggttcgggcgggcgcacgtggtggggcaggggagcttcggggccgtctaccgcggggtgctccccgatgggaggaaggtcgcggtcaagctcatggatcgccccggcaagcagggggaagaggagttcgagatggaggtggagctgctgagtcggcttcgatcaccttatcttttgggcttgattggccattgttcagagggtggacaccggctgctggtctatgaattcatggccaatgggggtctccaggagcatctctacccaaatggaggttcctgtggtggtatctcaaaattggactggcctactagaatgagaatagctcttgaagcagcaaaaggtctggaatatcttcacgagcgtgttaatccacctgttatacacagagacttcaagagcagcaacattctactggacaaggacttccgtgcaagagtgtcagattttggtttggctaagcttggatctgatagagctggtggtcatgtatcaactcgagttctaggcacacaaggttatgttgcaccagaatatgctttgaccgggcatttgacgaccaaatccgatgtctatagttacggtgttgtacttctggagttgcttactggcagggtgccagttgatatgaagaggcctccaggcgaaggtgttctagttaactgggcattgcctatgctcacagaccgagagaaggttgtgcagatcttggatcctgcactggagggtcaatattcattgaaagatgctgtccaagtggctgccattgctgccatgtgtgttcaacaagaggctgactacaggccactaatggctgatgtggttcaatcgttggttccgcttgtcaagaatcgttctactccaaagacgtgcaaccctagtgtccaagcgtag</cdnaseq>

Protein Sequence

<aaseq>MSSGGGGGDDYKREESVALMVIVSLAALSLLSLVAAFAYYCYIT RKVSRRLHSLDLPKHHRRSSSSSPPPMPPPLPPPPPSANAPTLGKESPSSNSASDGAA AAVVVGGERGAVQVFSYRQLHAATGGFGRAHVVGQGSFGAVYRGVLPDGRKVAVKLMD RPGKQGEEEFEMEVELLSRLRSPYLLGLIGHCSEGGHRLLVYEFMANGGLQEHLYPNG GSCGGISKLDWPTRMRIALEAAKGLEYLHERVNPPVIHRDFKSSNILLDKDFRARVSD FGLAKLGSDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVP VDMKRPPGEGVLVNWALPMLTDREKVVQILDPALEGQYSLKDAVQVAAIAAMCVQQEA DYRPLMADVVQSLVPLVKNRSTPKTCNPSVQA</aaseq>

Gene Sequence

<dnaseqindica>4215..4442#3660..3792#3245..3503#950..1085#9..527#gggttccaatgtcgagcggcggcggcggcggcgacgactacaagcgggaggagtcggtggcactcatggtcatcgtctccctcgcggcgctctccctcctctccctcgtcgccgccttcgcctactactgctacatcacccgcaaggtctcccgccgcctccactcgctcgacctccccaagcaccaccgccgctcctcctcctcctcgcctcctcccatgcccccgccgctgcctccccctcctccttccgcgaatgccccgacgctcgggaaggagagcccgtctagcaactccgccagcgacggcgcggcggcggcggtcgtggtcggcggggagaggggggccgtccaggtgttcagctaccgccagctgcacgccgccacgggcgggttcgggcgggcgcacgtggtggggcaggggagcttcggggccgtctaccgcggggtgctccccgatgggaggaaggtcgcggtcaagctcatggatcgccccggcaagcagggggaagaggagttcgagatggaggtaaaaaaaataatctgcgtttcgagtaattaccagcaattgaaatgcgggtttccgtctgagattggggcctgggacagaataacatgcaacgggcggtaaattcgaatttaccacccattgcgagttatatatgttgatgaaattttgcggtccaatggagacaatgagacactgcggagtttccgagcgaaatggggtcactgtcgtctattggggttagttttggtttggcatcttgtcaaagatgtttccaaaaatggagtgttcggttgcttggtttggcctgtagttggctctaaacacacacatggagctctaattaccgtaaatctgggttatgatgttgctactgctggaattctaagctgttctaatcaagtttgagcggttaatatggggcattggtgatcttttggcaggtggagctgctgagtcggcttcgatcaccttatcttttgggcttgattggccattgttcagagggtggacaccggctgctggtctatgaattcatggccaatgggggtctccaggagcatctctacccaaatggaggtatgcacaccttttagcatccaattacaactatagttgaatttgatattttacaatgatttttaggcaggtttgatgttgttagttaagtgttgcaacatttgaacaccaaactatgagagcaaattgactgggaagctatccctgaacttagttgactattgtctttggatggcaaaactgcaaaacactagtgatgccacagctagaactagggacctagctgaattaattgcttttagcgcacatgaagtatttggttgataaccttattatgtcctgatactttgaggggaagaaatggagcagttgtaacagttgtcttgctgaggaaacaaacttatatctgactaaaaggagggaaagtgagattcaaataatacaggaataaaaattctaaatttgatgcttagtattacatatcagaagacaaacgaattgggagttgaatatttcatgtactgtaccttggtttttattactagacaccattggtcgtatgctaattcattatgaatttttccctagattctgttcatggattaacgaaaatgtgcaagagctctatttgcctctgccattctatgagtccattgggactgcttggtctggatacatgatatagcaatgaaaataattacattctctgtaatgctgatataggatacgttgtttgatgtttacatatgctcttgaagattgactatcccttcggaatgacagttagagaagagaacttacctaattggtgaacctatcaaatcacctatctcaaagtcacaatgtcaaaagaatcaaacagaatttccagttcatcaagaaatggtttatgtattcatgtaaagctttagcaatttagtggcctagatctatagtatttaaatatactgtctacactatttgcttggtttaattgctaaggaaagcatgctaacctcttatcagtgtgaatttactgattttagtctgtttaatactgtacaagaaagtggaaactgaccgttttaggccttctctcttccagataagaactcttagctagtcctatggtgaacaaggtgtcttcaatcttaaaaatctggtgttttttccacaaaaaaaaatcaagccttgtaatattgtaaaatcggtcatctggcctttgttgagagagcaccaccattatttttcatccttacaattgagttattaatctgttgagtcttgtatatatggcctgccgagatagttctaaaagttatggtttggaaaacaagtgaagtgaattcactacaaaattgcagtcattacatatgcattgtgttctttctttattggtatacattgatactgctttaagtccttaaagtgggcaggtagttggcatactgtgaaattacagattaccacatttcaattcttttggttgatatgaaaatatgaagtttctgaaaatgtttccttgtcatttaccgtagcatatcttttttagtgatggtattcattcagccaaattttcttcggaaatcctccccgtcgggcgcccgatggggagaaaaaaaatcaggcgccccgcgccgcccacgcctcgcgcgccctcaccatgcgcccccaccacgcgcgcccattgcaacagccgcccggatataatggaaacaccctattaagggggatccgtttcattttttgttccaccaacaatgtttcagctagtatactcgtgatgttttcctatgtatggatcacatgttgcagtgaatttttgatactgtttaatattttcaacttgatggacacgtggtttgttgatgtacacgagttttaagtgttgcaatggctttaaatcgtttgttgcatacgttgaaccaaattgtttcatctagcgatctgatcgtgtttcacttttttttaagaattgaaacattctttcatatttgctgaaacattgtttttatatagggtgaaacaacgcctgattttctggaaactgtttgtttcatacgttgtagcaaaatgtttcatgaggtgatttggttgtgtttcagcttttgaaaagattgaaacattttcgatctacttggtgaaacaacgcccgatttttgacaaaaatatcgggcacccgatttgtaggcgcgcccatttttctcgtcaactgatatcccacaaagctgacattgtaggttcctgtggtggtatctcaaaattggactggcctactagaatgagaatagctcttgaagcagcaaaaggtctggaatatcttcacgagcgtgttaatccacctgttatacacagagacttcaagagcagcaacattctactggacaaggacttccgtgcaagagtgtcagattttggtttggctaagcttggatctgatagagctggtggtcatgtatcaactcgagttctaggcacacaaggttatgttgcaccagagtaagaccaaattctgaacccattgtgaacgaacttgagtttgatactgatacattcaattctttttccattttactgtttgatttgataatataaatgaattgttgaactgattatactgtctctaatgtggtgcatgctacacaaactctgaagatatgctttgaccgggcatttgacgaccaaatccgatgtctatagttacggtgttgtacttctggagttgcttactggcagggtgccagttgatatgaagaggcctccaggcgaaggtgttctagttaactgggtaagaacattagctgaccatcacatagttgtaccgatgtatctttactttgaactgtttttcttcaaccatcaggaattataaaattagtactactgtttagttcatagtataaatgaggtaatggaacacttagtacttcagttgcaaaagtttgagatgctttccaagtgaggaaccaatatgtactaaggtacatcagtacatgtacttcaacactaaaatttaccatgcacttcaatcgactctgcttcattattcctgtcattttcttatgctagtgaatcacgttacagcttaattaggatccatctgcctctcttgttatactaggtaggaaaggttccatgtaattatttatcttcaaaaataatatttaaacattgcatatatctgacctgtggctagttgcattgatgcaggcattgcctatgctcacagaccgagagaaggttgtgcagatcttggatcctgcactggagggtcaatattcattgaaagatgctgtccaagtggctgccattgctgccatgtgtgttcaacaagaggctgactacaggccactaatggctgatgtggttcaatcgttggttccgcttgtcaagaatcgttctactccaaagacgtgcaaccctagtgtccaagcgtagaagccacttgaaggggaagttgaatgctcagtttccaggttggtgcttgacttttctggaaattttcatctacatctaacaactactgctgagtttatgagatcagtatgctccataacttaattctcttcctctgccagtgaattcctgattttgcgaggtgaatcgtaagcagttagatttagaaatcaagcattaatttagttcgatggaccagaaagctagtttcagtttgaagggaagtcctctagtcatgtgcaattagtgatcatgttaggtggtttggcttagtacttatggttgtgccctgtgggaatgatcagagagtgttgtttccagctggcagaattgcaatgtactgctgaattttcttttggcttgtcaattatgttaggtgtctttggagatccatgttcgttgtcttaactcttgtgctaatacgttggtctcatcagcttggcctataaacatcgccgatgtatctttttgtatatgtatatagtaggattctggaacttataaaaacaaacatttgccagttgagcattttcatgcatttcctttctcgttttctttaagcttccagcacatacttcagagaagcggcaaatttattatttctgtagaatgtgactaaaagttcccaaaaaaaaataacaatgtggtaataatgttcaggtgcatgtcaagtttccaacagcaaactattgtgacgggttgcaatttgagacattgtttatgttctctcttttatatattgagaggggagggccacatgattaatgtcgttgatgacccaaggaagatttgttgatagtgcatcatatttttggccttttgtaatttatcgtacaagcatcagaaactgcaatggacggttgatcggttagttgttaactattactccgtatgaattatgattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0207700, RefSeq:Os05g0207700