Os04g0614600
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0614600 |
|---|---|
| Description |
Similar to Viroid RNA-binding protein (Fragment) |
| Version |
NM_001060398.1 GI:115460525 GeneID:4336983 |
| Length |
5755 bp |
| Definition |
Oryza sativa Japonica Group Os04g0614600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:31575185..31580939 |
| Sequence Coding Region |
31575367..31575420,31576123..31576253,31576341..31576425,31576568..31576640,31576770..31576867 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:31575185..31580939 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:31575185..31580939 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtgattgcgcgcggccttctccgatcgaatgcctcttcttcctcctctcaggcaatcaacttattgaagtatgtaactagcactggaagtctgcaagggcacacgcaaaatttgtgtgatgcatcaaccagacatttcagttcagtaccatcgccccagtacaactcaactgaagagaatgggttcaaggggcatggcatgttggcaccattcacagctggttggcagagcaccgatgttcatccgttagtcattgaaagatctgagggttcgtatgtatatgatatcgacggaaagaagtatctagattctcttgcgggactatggtgtacagctttaggtggtagtgaacctcgattagtcaaagctgcaactgagcaattacacaagttgcccttctatcactccttttggaaccgtacgaccaaaccatctctggatcttgcaaaggaactgcttagcatgttcactgcaagggaaatgggaaaagtgttcttcacaaatagtggttcagaagcaaatgattctcaggtaaaactggtctggtattataacaatgcactgggaaggccagacaagaagaaatttattgcacgatcaaaatcataccatggatcaacactaatatcagctagtctatccggtcttcctgcactgcatcagaagtttgatctgcctgcaccttttgttctgcacacggactgccctcactactggcgcttccatcttcctggtgaaacagaagaagaatttgcaactagacttgccaataatttagaggaacttatcctcaaagaaggaccagaaacaattgctgcattcattgcagagcctgtgatgggtgctggtggtgtcatacctcctccaaagacctattttgaaaaggtccaagcgatcgttaagaagtatgacatccttttcatagcagatgaggtcattactgcatttggaaggttgggaaccatgtttggaagtgatatgtataacatcaagccagatctagtctccatggccaaggcgctttcatctgcctatgtgcccattggagcaattatggttagcccagaaatatcagatgttattcattctcagagcaataagctcggttcatttgctcatggatttacatactctggccatccagttgcatgtgctgtcgccatagaagccctgaaaatttatcaggaaaggaacattcctgatcatgtgaagcaaatttctccaaggttccaggagggagtcaaggcctttgcaggaagtccgattgttggagagatacgtggtgtagggttgatacttggaactgaattcgcagacaacaaatcgccaaatgatccattccctgctgaatggggcgtcggcgcgatctttggagcggagtgccagaagcgcggcatgctggttagagttgctggagacaacatcatgatgtcaccaccattgataatgacccctgatgaagtcgaggagctggtgagcatctatggagatgcactcaaggccaccgaggagagggtggctgagctgaaatccaagaagaacaattag</cdnaseq> |
| Protein Sequence |
<aaseq>MVIARGLLRSNASSSSSQAINLLKYVTSTGSLQGHTQNLCDAST RHFSSVPSPQYNSTEENGFKGHGMLAPFTAGWQSTDVHPLVIERSEGSYVYDIDGKKY LDSLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRTTKPSLDLAKELLSMFTAR EMGKVFFTNSGSEANDSQVKLVWYYNNALGRPDKKKFIARSKSYHGSTLISASLSGLP ALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFATRLANNLEELILKEGPETIAAFI AEPVMGAGGVIPPPKTYFEKVQAIVKKYDILFIADEVITAFGRLGTMFGSDMYNIKPD LVSMAKALSSAYVPIGAIMVSPEISDVIHSQSNKLGSFAHGFTYSGHPVACAVAIEAL KIYQERNIPDHVKQISPRFQEGVKAFAGSPIVGEIRGVGLILGTEFADNKSPNDPFPA EWGVGAIFGAECQKRGMLVRVAGDNIMMSPPLIMTPDEVEELVSIYGDALKATEERVA ELKSKKNN</aaseq> |
| Gene Sequence |
<dnaseqindica>183..236#939..1069#1157..1241#1384..1456#1586..1683#1817..1909#2404..2477#2690..2728#2842..2930#3015..3091#3182..3256#3657..3704#3791..3874#4006..4093#4194..4272#4362..4452#4545..4623#4917..5032#5342..5419#actctgcacacgtccccatctcccccgtctctcctgcgttctcttcgcctaccttacgataaacttggccacgtctcaatctctctctctcgcgctctcctctccttctataatactcggcctccccctcgcttctcgctctgtttctccgagaattaggggggaggttggagctgtgcaagatggtgattgcgcgcggccttctccgatcgaatgcctcttcttcctcctctcaggtgaatgaatgtttcttggattctctctctatctcgtagtcgtcgatgcaaaaaggcggtttcttttcttttttttttctttctttcgatatggttggtaggattaagatcatggaagtttggagttttgatcggtgagggttggaggataagcctggttgatgtgggattgggaagaggtggtccgttcctttgttttttttttgttttgttttttcaaattgagatcacggactgtgcagattctaaagggggaatctttgtccttgttcttgatccgtacccatgcccgaattgtgtgctgttctcagcctctctcaggttggtagaggtgataaatttgtaccgtctccggttggaatttgccagtttatacggagcgatcagggagagagagaaaattttcttttctgaaatttcagctccctttgactgacagaagtgtgcgaatcttagtttcttggatttcccttttgtctttcgtgtgagttcagtgtacctgttttgtatgttcattacggctttcgtgctatatcgtcatctgaaattgacaggctaagttataattgaggaacagtgatgagaaaatatttggctgcttcttgtttttcagacttcagacatcaccacagctgttaaggtttgcattgccattgctcatatgagattttttttttttgttctttgttcccttgtttacaggcaatcaacttattgaagtatgtaactagcactggaagtctgcaagggcacacgcaaaatttgtgtgatgcatcaaccagacatttcagttcagtaccatcgccccagtacaactcaactgaagagaatgggtacagaatgcattctgtttgcccttgttatgctccggatgtctgctatcttatatttaaatcatgaatgcacgatgatctttccaggttcaaggggcatggcatgttggcaccattcacagctggttggcagagcaccgatgttcatccgttagtcattgaaagatctgaggttctgactctcaaacctggcattatattagcttatttatcttgcaatgtggaataggattttgggaacatgttgattgctctaccaaaatagaaggggtgaactatatttttcagatgctcaccttaccttatacatgcagggttcgtatgtatatgatatcgacggaaagaagtatctagattctcttgcgggactatggtgtacagctttaggtatgtgcagcatttggagtcctttttttttaccataaagaacagaagacagaattgatgtattcttcaggacgataagtttagagtcgaattcagtttagtctaatgaactgtacgcaatgtcttcaggtggtagtgaacctcgattagtcaaagctgcaactgagcaattacacaagttgcccttctatcactccttttggaaccgtacgaccaaaccatctctggtacatactctgttgttctcaacaattattggtgcatatttaaattgaagagaagggtagttgtggatatcttaattttatcaaaagcatttactaagtttgcaaatattgattctcgcgctgctactttcaggatcttgcaaaggaactgcttagcatgttcactgcaagggaaatgggaaaagtgttcttcacaaatagtggttcagaagcaaatgattctcaggtatggtttcttttttgggaatacgtaaagtgtgtatgtttgtattaagattaggagtcatgtatggtttcttaaagaactggtcatctcctacgctcctcatactatcagtggtattactattactagtattctaatctgtagtgaatctttgaagctgctttgcattatccacaaagacttctttctggaaacaaaaaggcactgaaaaaagtaaaacatgaaaaagtggaataactaaattaggataatctgcatgtttcctcctaaaaaatggttcattcgttcctagctggctagtctgttactctttccactgccttaacagttcattccattgaacatatctttatgttcatattgaatattgtagtccctgaatgataaatactcgagattttagtaccaatcttgtaatttgttctgcccctttctcttaatcttctcatgtcattgttcctacattgatagttttccaccattccttattacaggtaaaactggtctggtattataacaatgcactgggaaggccagacaagaagaaatttattgcacgatcaaaatcgtaagttaaaaaaaaaacttcaattcctcaaaccaagaagtgtgtgtgtttttttttaaaaaaatgcttcatttcatcaatggataatttgcattggcatcgatttccatccacctcgtcatttctatatcatgtgatctcactgttaagtttcatgatgaaacacaaatgaattttgattttcattcttactgttggtacacttgtttcagataccatggatcaacactaatatcagctagtctatccgggtaagaagtgccctccagaaaaattaaatgagtttgccttcatacacctaattaacccactatcgttgccactgaaaagtctgaaaccattgctcattcctctgcaacttcagtcttcctgcactgcatcagaagtttgatctgcctgcaccttttgttctgcacacggactgccctcactactggcgcttccatcttcctggtactcttaactgaaaatttactgtatgattaattgatcatcatacaagcgtattattctgataatgactttggtgggagacaggtgaaacagaagaagaatttgcaactagacttgccaataatttagaggaacttatcctcaaagaaggaccagaaacagtacagtcttcttttcaccggaacttgtattgtgctaagaggtccaaggtttactactctactaatccaatgtgtattttctccttccagattgctgcattcattgcagagcctgtgatgggtgctggtggtgtcatacctcctccaaagacctattttgaaaaggtaattctaacttaagtgcattcctcgtgttgtaaaatacttgaactcagcggccaaaattatgactcttttcccaatcccaagattatgaaaaatacttgggacacctcacctatcattggaaaactccagacggcaaacttgaaaaatactggcattccaacatgagtacaatcttgttatagccatatgaaaatgtaaacccttccttgtatcatttatttaaactatcagattgaatatagtatagcttagattcatgtttaatgaattttttcaagtacagttgtctcgtctagattacagtgttccaaaaaaacaaaattgcttcatgaactccgcatcaaatacccgaattccttttccagattatcttatgtcattttttgtctaccaacaggtccaagcgatcgttaagaagtatgacatccttttcatagcagatgaggtactttgcatattctactgcatcataagaaaatatgcgatacaaagaaatgtatgcaactgttactaagtgatgatccattctaggtcattactgcatttggaaggttgggaaccatgtttggaagtgatatgtataacatcaagccagatctagtctccatggccaaggtgagtattccagtaccatcatgacaggaacagtgttgcttttgccccttttgcatggtcaacgaattatgatcctctttctatcagcgttgtctgatgtaagacaagtaatgaaaatttcattgcatcaggcgctttcatctgcctatgtgcccattggagcaattatggttagcccagaaatatcagatgttattcattctcagagcaataagctcggtaagttggtgccttcattgtaatgagctcaatcctctctctggattgacatttgcttgagcttccccaaaacatgacgtgttgaaatcttccattgcaggttcatttgctcatggatttacatactctggccatccagttgcatgtgctgtcgccatagaagccctgaaaatttatcagtacgctgcacttcctatagtatcaaaccatgctgcctctactggattcttgttactgataataataaatattttacaattggtatcagggaaaggaacattcctgatcatgtgaagcaaatttctccaaggttccaggagggagtcaaggcctttgcaggaagtccgattgttggagaggtatccatctcttacttatttctgctggtattctcatagtgcagaagctcctttccttgttgaaaacatgatcaatgtgctcctacatgcagatacgtggtgtagggttgatacttggaactgaattcgcagacaacaaatcgccaaatgatccattccctgctgaatggggtaagcaacagtagcaactacaatgccacctcttgtttgtccagcagcatctttcagaatgctagttcttgtttttcaaccacttaacctgaagcctcatgatatgctgtattatcataataccactaaagttcttaatataaaaataactagtacaactctactagagttagaataattagtcaaattccatgatgtccaaaggtacatcatcacatgaccagtaagtacccttaacaaactgctcctccaaagcgaagcatggttctcatgataccagttggcattttcaggcgtcggcgcgatctttggagcggagtgccagaagcgcggcatgctggttagagttgctggagacaacatcatgatgtcaccaccattgataatgacccctgatgaagtcgaggaggtaattcatcagatcaaaactcacagtagccaccacccttctctcttttcagatcataatagacgaactgaactctgaagcagtaatactgaacatccttttttgacaaaacagtacttctactgaacatctaaaactgacgaactgaactctgaagcaacagtattgaacaatgaacatctttttgttgacaaaaaaaaagtaatgaacatctgaaactgacgaactgcagtattgaacatcctttttgacaaaaaaaaaaaaaaacagtactgaacatctgaaactgtcccctccattgtttttcagctggtgagcatctatggagatgcactcaaggccaccgaggagagggtggctgagctgaaatccaagaagaacaattagaccgagttgacaactcctcatcttgcaactgcacgagacgacgatgacgatgataatgctggcagcgatgatgatgatggtgatggtgttcttggtggatgtacagagtaataatccctcgtctgtcagaaaactctactcagagaacagtaataacgctgttcttagcgtgcaaaaaataatcaaaacagcgatcatgcattcacccagaaccggtgaatcttcaccagatttcagtcttacgcacgggattagctgccgtggtgaactggtggtgactgtcatcttgtagaccaaatcaggttggaataaatcaaatttacatgaagtcgcatg</dnaseqindica> 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