Os04g0617600
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os04g0617600 |
|---|---|
| Description |
Similar to Cdc48 cell division control protein 48, AAA family |
| Version |
NM_001060421.1 GI:115460571 GeneID:4337006 |
| Length |
5289 bp |
| Definition |
Oryza sativa Japonica Group Os04g0617600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:31762652..31767940 |
| Sequence Coding Region |
31763184..31763273,31763348..31763431,31763512..31763656,31763737..31763858,31763957..31763995 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:31762652..31767940 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:31762652..31767940 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtggaggcgacgcggcagcggaggaagccgctggtgctggcctccacgcaggcgctgctcgactcgctgccgggggaccgccgcgggtcggcccttccgccgccgccgccgccggagccggtgcgcatcagggccggggtgctccgcttccccaactcctcctcctcctcgtcttccgcgggcggaggcgagttcggggaggccgcctccttcgtcgccctcccctcgtccgcgctccgccggctcgccgtcgtcaccggcacgccggtgcttgtgaagaatgctgacaataatgtcggaaggattgccaaagcagtagtacttgatcacccatgccttgatgattccctgacagaacatactgagcctgtggacgcagcctctcccttggataatgccatgggtatcttaccctgtcgctcttttccaacaaacggctttccgcccttggatgaagaggtcgcttatgttagcccacttctggcattcaatctgggagtccatgtctcttgtctcaagcttcttgttcaaaaaggagagaaacctttcaagttctgttctaaagttgaagatagtgatctggctgctggtgaagaaagtaatcctattcttcacttagagattcttccatcccctcaagtgccgaaacatgctttgcatttgcgggtttctgttgtgaggattcctgaatgtggtgtgtttgcttctctaaaggcaaattcagccattggaggaagtgactaccaagatatgattgatcaagctctgaatgagcactttaagtttgataggttcctagcgagaggggatgttttttgcataaggaacaattggaattgtggcgcaacctcctgccttgcatgcaacagggaggacaatagactccatcctcatgatatgatttacttcaaggtgactggcatggaaccatcagatgaaccagttcatcgcgtcaactgtaatcaaacagcccttgttcttgggggaggtgcttctgcttcaatacccccttacagtttgtttgcttctcctggtgcttcagttcctttgcacagtgaaatagtggagcatttagcatctatcattgcaccagcactatgtccttcaaacattttgccaaaagtcaagttttccactttcttatacgggccttcaggatgtgggaagcggacggtagtcaagcatgttgccaaccattttggtttgcatgtggttgagtgtagctgtcatgatctaatgacttcatcagatagcggggcaccagctgcacttgtggctgccttcaaagaagctcataagtattcaccatgtataatacttcttcgccactttgatgctattgggaatacatcctccaacgaagggacacaatctgcgcaatctggcactgcagcaaacattgaatccgtcatcaagcagtacattggacaacattgggttgctacggaatcgctcccagcaagagatataaatggaaatccataccttgtggaacctgaatgtgtaagcccacttcaagttatactagttgcaactgcagatcgtgctgaaggaatgccacaatcaattaggcgatgtttccgccatgagataaacatgaaaagtataaatgaagaacagaggaggaacttgatatctgaaacactccattgtgtttcaacgtcagctgatgagagtataaatgacaagttcgtaaaagatttagcagtacaaacgtctggtttcatgccaagggatatacttgcattggttgcagatgctggcatatcttttgcacataaagttgaaacggataaaaataatagcgaaggtgataagcttaaaggcatccttcctacaagctcttctagctctcaaaatgaagaaaaaactttttgcaaagaatatattttgtcttctctagaacgggccaagaaaaggaatcgtgctgcactgggtacacccaaagttcctaatgtcaaatgggaggacgttggtggtcttgaggaagtgaaaaaggttattctagatactattcagttacctctgttgtataagcaccttttttcttctaaattggggaagcggtcaggtgtcctgttgtatggacctcctggcacagggaagacattattggcaaaagctgtagcaacagagtgctctttaaactttcttagtgtaaaaggtccagaattgattaacatgtatgttggagaatcggagaagaatgtaagggacatttttgagaaggcaagatctgcacggccatgtgtaattttctttgatgagcttgattcccttgctcctgcacgaggatcctcctcagattccgcaggtgtgatggatagagtagtttcacagttgcttgtggagattgatgggttaagcgataacagtcaggatcttttcattattggagctacaaataggcctgaccttcttgattctgcacttctccggcctggccgctttgataagcttctctatgttggtgtaaattcagatgcatcatatagagaaaggatcctgaaagcacagacacgcaagtataagctccatgagaatgtttctctcttgtcaattgctcagcaatgtcctccaaactttaccggtgctgatatttatgcgttatgcgcagacgcatggtatcatgctgctaagaacttggccaaaacacttgaggctgatccttcaagaaccagtgaagccagtgctgatgacgtcattgttgagataaatgatttcatgacagtgttaggggatatcacaccatcgttgtctatagaagaattacaaaactatgaacagttgaggaagaagattgagggaccatctagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MVEATRQRRKPLVLASTQALLDSLPGDRRGSALPPPPPPEPVRI RAGVLRFPNSSSSSSSAGGGEFGEAASFVALPSSALRRLAVVTGTPVLVKNADNNVGR IAKAVVLDHPCLDDSLTEHTEPVDAASPLDNAMGILPCRSFPTNGFPPLDEEVAYVSP LLAFNLGVHVSCLKLLVQKGEKPFKFCSKVEDSDLAAGEESNPILHLEILPSPQVPKH ALHLRVSVVRIPECGVFASLKANSAIGGSDYQDMIDQALNEHFKFDRFLARGDVFCIR NNWNCGATSCLACNREDNRLHPHDMIYFKVTGMEPSDEPVHRVNCNQTALVLGGGASA SIPPYSLFASPGASVPLHSEIVEHLASIIAPALCPSNILPKVKFSTFLYGPSGCGKRT VVKHVANHFGLHVVECSCHDLMTSSDSGAPAALVAAFKEAHKYSPCIILLRHFDAIGN TSSNEGTQSAQSGTAANIESVIKQYIGQHWVATESLPARDINGNPYLVEPECVSPLQV ILVATADRAEGMPQSIRRCFRHEINMKSINEEQRRNLISETLHCVSTSADESINDKFV KDLAVQTSGFMPRDILALVADAGISFAHKVETDKNNSEGDKLKGILPTSSSSSQNEEK TFCKEYILSSLERAKKRNRAALGTPKVPNVKWEDVGGLEEVKKVILDTIQLPLLYKHL FSSKLGKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYVGESEKNVRD IFEKARSARPCVIFFDELDSLAPARGSSSDSAGVMDRVVSQLLVEIDGLSDNSQDLFI IGATNRPDLLDSALLRPGRFDKLLYVGVNSDASYRERILKAQTRKYKLHENVSLLSIA QQCPPNFTGADIYALCADAWYHAAKNLAKTLEADPSRTSEASADDVIVEINDFMTVLG DITPSLSIEELQNYEQLRKKIEGPSR</aaseq> |
| Gene Sequence |
<dnaseqindica>4668..4757#4510..4593#4285..4429#4083..4204#3946..3984#3721..3831#3518..3640#3290..3376#3115..3186#2701..2973#2427..2618#2151..2334#1842..1983#1501..1744#719..1363#29..298#ctctctctctcgcgcgcgcgtcgcagccatggtggaggcgacgcggcagcggaggaagccgctggtgctggcctccacgcaggcgctgctcgactcgctgccgggggaccgccgcgggtcggcccttccgccgccgccgccgccggagccggtgcgcatcagggccggggtgctccgcttccccaactcctcctcctcctcgtcttccgcgggcggaggcgagttcggggaggccgcctccttcgtcgccctcccctcgtccgcgctccgccggctcgccgtcgtcaccggcacgccggtaagtggactggtcccctccccgcgccttctcggatcaaatatcccattatctcgtctcagttagatcgttatgattgagtaattcggtggaaaatctggtcagtgaattggattttagtcgattttggatggtcacatatggggtttacctgtacactgttctgaattctgattagttggatgggaattgatgattagcttagccaaattgagctgtaataagtacaatggcaagtgatgcatagagcaatggtgctacaaaatttacctttgtgagcatacgattgcatttatgttacacttgattcaggcaatctaaatgatgatagaagtgcgctagtgtatactcctagcataaggttgggcagtatataggaatctattgtgctgaaagtaataaagggctttcaatctgcaggtgcttgtgaagaatgctgacaataatgtcggaaggattgccaaagcagtagtacttgatcacccatgccttgatgattccctgacagaacatactgagcctgtggacgcagcctctcccttggataatgccatgggtatcttaccctgtcgctcttttccaacaaacggctttccgcccttggatgaagaggtcgcttatgttagcccacttctggcattcaatctgggagtccatgtctcttgtctcaagcttcttgttcaaaaaggagagaaacctttcaagttctgttctaaagttgaagatagtgatctggctgctggtgaagaaagtaatcctattcttcacttagagattcttccatcccctcaagtgccgaaacatgctttgcatttgcgggtttctgttgtgaggattcctgaatgtggtgtgtttgcttctctaaaggcaaattcagccattggaggaagtgactaccaagatatgattgatcaagctctgaatgagcactttaagtttgataggttcctagcgagaggggatgttttttgcataaggaacaattggaattgtggcgcaacctcctgccttgcatgcaacagggaggacaatagactccatcctcatgatatgatttacttcaaggtaacttacctatccgtcatcctccatacatgttttaattaatatgctggagaaaggtgatctatcgtttagcttatgactggctttatgcaatcattcataagcttgatatgttaacattgtaacccctgcactaggtgactggcatggaaccatcagatgaaccagttcatcgcgtcaactgtaatcaaacagcccttgttcttgggggaggtgcttctgcttcaatacccccttacagtttgtttgcttctcctggtgcttcagttcctttgcacagtgaaatagtggagcatttagcatctatcattgcaccagcactatgtccttcaaacattttgccaaaagtcaagttttccactttcttatacgggccttcaggttatttcactcaagctgtaatttccagaaatttattttcagtgtttactactcagcttgaactaaaccgttactaacgaaaatgatgaaagtgcaggatgtgggaagcggacggtagtcaagcatgttgccaaccattttggtttgcatgtggttgagtgtagctgtcatgatctaatgacttcatcagatagcggggcaccagctgcacttgtggctgccttcaaagaagctcataagtactcattttcttgtgtcctattaccttcttattctctaccgatgaaatctattcatgctttagtcatcaaatgatcaaaaacattttctgtagttcgtttgttttcttcaggtactgatttttttactttgttcacataattaagctgaataacttttcatgaaggtattcaccatgtataatacttcttcgccactttgatgctattgggaatacatcctccaacgaagggacacaatctgcgcaatctggcactgcagcaaacattgaatccgtcatcaagcagtacattggacaacattgggttgctacggaatcgctcccagcaagagatataaatggaaatccagtaagtattccttccaccttcctttaggttatccctcgttttgtggtataagaccatcatgttccttatcatcaaacctccctttatttcagtaccttgtggaacctgaatgtgtaagcccacttcaagttatactagttgcaactgcagatcgtgctgaaggaatgccacaatcaattaggcgatgtttccgccatgagataaacatgaaaagtataaatgaagaacagaggaggaacttgatatctgaaacactccattgtgtttcaacgtcagctgatgaggtagaattttctcgctattgatccaaaagtgaagttttgtgcttttacgttacatttgatgcttattttatttcaatttcagagtataaatgacaagttcgtaaaagatttagcagtacaaacgtctggtttcatgccaagggatatacttgcattggttgcagatgctggcatatcttttgcacataaagttgaaacggataaaaataatagcgaaggtgataagcttaaaggcatccttcctacaagctcttctagctctcaaaatgaagaaaaaactttttgcaaagaatatattttgtcttctctagaacgggccaagaaaaggaatcgtgctgcactgggtacacccaaagtaagacattttaacgtcctgttttttgatatcttatattcttctagctctcagacccattagcagactgctttggcatcgtgtatatgtgatttaacttgctttcatcaagtacttgatttggatttttatgtgctacaggttcctaatgtcaaatgggaggacgttggtggtcttgaggaagtgaaaaaggttattctagatactattcaggtaaaattttcttatgttcatcaatgtttattgtaacttaagaatatgaagctgctttagtaagtttgtgaatagtaatttgcctcttttctttgctatacagttacctctgttgtataagcaccttttttcttctaaattggggaagcggtcaggtgtcctgttgtatggacctcctggcacagggaaggttggtttacggtgtttttctattttatactttgtttttagttaagctttaccttttcgtttcttcccatctgtccaaagaggataagcacatagaaaagcactgtatacgtgctcattattattatgtttcaatttgcagacattattggcaaaagctgtagcaacagagtgctctttaaactttcttagtgtaaaaggtccagaattgattaacatgtatgttggagaatcggagaagaatgtaagggacatttttgagaaggtaaattgatttacacaaccatacaattgccataagatgtgcatatatgcttacggttgcaactcttctgtcaacctcaggcaagatctgcacggccatgtgtaattttctttgatgagcttgattcccttgctcctgcacgaggatcctcctcagattccgcaggtgtgatggatagagtagtttcacaggtatggttgttttcatcactgaggcagtgtctcaatgttttttttattatctctgttcaaatattggactttgtggtctcagtttcccctttcctctctttgactctttgttagttgcttgtggagattgatgggttaagcgataacagtcaggtattatccttgttcataccaatttgttttcctacttgttttttttttcctgagatgctttgacatgaaggggaaccattttcccaattcttttctaggatcttttcattattggagctacaaataggcctgaccttcttgattctgcacttctccggcctggccgctttgataagcttctctatgttggtgtaaattcagatgcatcatatagagaaaggttggcatctgtatttgttcataaaattccagatttcgttgcaaaattgcacctttgatccaagtgtaattgatgtgcaggatcctgaaagcacagacacgcaagtataagctccatgagaatgtttctctcttgtcaattgctcagcaatgtcctccaaactttaccggtgctgatatttatgcgttatgcgcagacgcatggtatcatgctgctaagaacttggtgagtagcaggcagttccttcccacttcactgaccttttcttgtctttgctctgttggacttacacctggtatttcaaggccaaaacacttgaggctgatccttcaagaaccagtgaagccagtgctgatgacgtcattgttgagataaatgatttcatgacagtaagactttatatcattttgggcatgacaataagtatgatttgttcatatcaactaatttcattgctattcaggtgttaggggatatcacaccatcgttgtctatagaagaattacaaaactatgaacagttgaggaagaagattgagggaccatctagatgacgtcagttaagccttcattctgtgctaccatagcaacctaaggttcatattcgttttcctgacgtgaaaatgtttacattatttcctcccaaggtttcatgaaattccacgtccgaatgatttcattcttcagtttcagtgtatttgacacatggtggccatgacgaaagcattggctagtgatgaatgtggcaccatttttctttccaccatgccagatcttccgggctccagttatattttgacttcaacacgagctaactgaccttatctgcaaaggcattatcatctagaatctagacagtttctggttctgctttagttagggttcaacgaattgactcaaaattgcaaacgctgcatagcattcatatatagaaagtgagtatactcatgtatcatctcaactatgtatcctcctgtcctctatccttcagaggacaatactgctacgttttgttggcaaccttttcctttgtcaactagatagtctgcaccttcagcaaactaatcctagcatacttttctttct</dnaseqindica> 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