Os04g0620700
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os04g0620700 |
|---|---|
| Description |
RNA-binding region RNP-1 (RNA recognition motif) domain containing protein |
| Version |
NM_001060444.1 GI:115460617 GeneID:4337032 |
| Length |
7029 bp |
| Definition |
Oryza sativa Japonica Group Os04g0620700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:31942669..31949697 |
| Sequence Coding Region |
31944452..31944533,31944620..31944795,31945441..31945542,31945634..31945864,31946440..31946541 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:31942669..31949697 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:31942669..31949697 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggcaagtcaagcaagaaatctgctgttgaagttgcacctacctctgtctcagtctcagaggggaaatctgggaagaagggaaagagaaatgcagaagatgagattgagaaagctgtgagtgccaagaaacaaaagactgtacgtgagaaggttgtgccctcaaaggaggaagccaaaaaagtgaagaagcagcccccaccgaagaaggttgagagcagcagttctgaggaggattcttcagaatctgaagaggaggtaaaggcccaaccaaagaagactgtccaaccgaagaaggctgcacaacctgctaaagaggagtcaagtgatgatagcagtgatgatagctcctcagatgatgagcctgcaaaaaaacctgttgctcgtccaaataaggctgcactttctaccaacagtagcagcagtgatgatagcagtgatgagagtttatcagatgatgaacctgtgaaaaagcctgctgcccctttgaagaagccagttgcacttgctaccaatggatcaaaaaaggttgagacagacagcagcagctctgatagcagctctgatgaggagtctgatgaggatgataaaaaaactgctgctccagtgaagaaaccttcagttgctgctatacaaaagaagacccaggagtctgacagttctgatagtgactctgattctgaatcagatgaggatgtgccgactaaagcaccagcagtagccaagaaaaaggaagaatccagtgaaagctctgattctgaaagtgattcagactctgatgatgaggctgctgctgttaaaaaggaagaagaatccagtgatagctcagacagtgactctgaatctgagtctgattctgatgaaccagcaaaacctactattcctgcaaaaaggccactgacaaaagacacaaagaagggacaatccaaggatgaatctgaagatagttctgatgagagttctgaggaaagtggtgatgaacctccgcaaaagaagattaaggattctacaacttctggtactaccaagccttcccctaaggctaccaagaaagaaatcagcagtgatgacgaaagtgatgaagatgacagttctgatgaaagctctgatgaggatgttaagcaaaaacaaactcaagctaagaagcaagcaccagtagcacaagagagtagcagctccgatgaatcttctgaagaagatagtgacatggaaagtgatgaaccagcaaaaactccccaaaagaaggaaactgctgtgtctgttggttcgaataagtctgcgacaaaaccgggacaagaggaaccaaaaacgcctgccagcaaccaaaatcaagctaccgggtcaaagactctttttgttggaaatttaccatacaatgtggagcaagaacaagtgaagcaatttttccaggaggcaggtgaagttgttgatattcgtttcagtacctttgaagatgggaacttcaggggctttggacatgttgaatttgccacagcggaagctgctaagaaggcacttgaacttgctggtcatgacctgatgggacggccggtcaggcttgacctggctcgtgagagaggcgcgtatactcctggcagcgggagggacaatagttctttcaagaagcctgctcaaagctcaggaaacactatatttattaaaggctttgatacttctcttgacatacaccagatccggaattcacttgaagaacattttggctcgtgtggagagattacacgggtttcaattccaaaggattatgaaaccggtgcaagcaaagggatggcgtacatggattttgcggacaacggttccttgtcgaaagcatacgaactgaatggatctgacctcggtggatacagcttgtatgttgatgaagcgaggcctaggcccgataacaacagagagggtggcttcagcggtggaagagactttaacagcagtgggagaggaggaagacgtggtggacgtggtgatggtagccgtgggcgcggtgaccgtggacgtggtagaggctttggtaggggtgacaggggccatggtggacggggtacaccgttcaagcagagcgctggtacacctagtgcaggaaagaagacaacattcggtgacgacgactag</cdnaseq> |
| Protein Sequence |
<aaseq>MGKSSKKSAVEVAPTSVSVSEGKSGKKGKRNAEDEIEKAVSAKK QKTVREKVVPSKEEAKKVKKQPPPKKVESSSSEEDSSESEEEVKAQPKKTVQPKKAAQ PAKEESSDDSSDDSSSDDEPAKKPVARPNKAALSTNSSSSDDSSDESLSDDEPVKKPA APLKKPVALATNGSKKVETDSSSSDSSSDEESDEDDKKTAAPVKKPSVAAIQKKTQES DSSDSDSDSESDEDVPTKAPAVAKKKEESSESSDSESDSDSDDEAAAVKKEEESSDSS DSDSESESDSDEPAKPTIPAKRPLTKDTKKGQSKDESEDSSDESSEESGDEPPQKKIK DSTTSGTTKPSPKATKKEISSDDESDEDDSSDESSDEDVKQKQTQAKKQAPVAQESSS SDESSEEDSDMESDEPAKTPQKKETAVSVGSNKSATKPGQEEPKTPASNQNQATGSKT LFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL AGHDLMGRPVRLDLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIHQIR NSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSLY VDEARPRPDNNREGGFSGGRDFNSSGRGGRRGGRGDGSRGRGDRGRGRGFGRGDRGHG GRGTPFKQSAGTPSAGKKTTFGDDD</aaseq> |
| Gene Sequence |
<dnaseqindica>1784..1865#1952..2127#2773..2874#2966..3196#3772..3873#4043..4135#4253..4330#4406..4465#4572..4649#4729..4872#4962..5060#5162..5218#5311..5402#5480..5597#5734..5822#5949..6039#6154..6245#6393..6700#6817..6848#attacctccccgcccgcgcacctcgagcccccaggtccgcctcgcctctccgtcgcttgccgccgcccgcagtggtcgccggccgcgcggggcttcgccggtgtcgcttcctcgtttgggtaagtcgctcctcactcccgcgtgactctacttcggtgaattttaggtgtggggttgccggggggggttggtaaggctagggtttagggtttatgtgaataaggagtggaatgttttcggatggtagcctgttgggcatgtaactcggagcgtacgtgttcttgatttctagctggtggatggagttcaaagctatttgtttttcctgaacaaagggatggtttgttttaacttttaactgaccgcttcctgcttatgttggtctgctggtagaatccatggtggtatgtgaatatgcttgtccaagactaccagcagtttattcattgctttggaagggaacttttttttatttgcatacgctgattgttgttcgagtagtagcatatacacttagcacgagctgcctctatctttcatctttaccagtttaccaagtcgcacattcgctcgactctaaccatagtattatacagtgttgaagtttgtagtttttggcgtaaaaatttgagtataaataaccgtcttctttcaatgcaacttgagccgtgccttctcaccatctctattgttgcatgactgtcatatctgaactttagaaatatacatattaacaatacgggtgacggaggtgttctagtgtatcaattgggtggtttacatgactttttaaacctatataaaattcatatatatttgagccgttacatatggtaaactcattgttatcccctttccacgttgtacttcatgtaaagctatcaacattttcctttttattgtagtacttattagaaaaccttttcaaattattatacttatgtaagttcttataatataagccatgcaagttctaaaataccaatttctcaactctgatccatatgtaaataagccacagatccatttataaataagttttaccattttgcaacagtgatatgtcaaattaagggcttgtgtaaaatgattttatagaaaggtcaaattgtaagattaaactggcatctaccctcacgcctcttgctgttgctcatgatcatctccccgtcactcgttgctcctgtcttggctctggaggcctcaggaacatttgcaagcacttcctttcttatatgtatctctatccaacggtaaatcctgttttactgttagcatccaacggttaatattatttgaaagatgtggcacatccatgttacatcattggattcacttttcgatagttaagatggggtgcactgctggtggtatacatttatgcttcgtatatttgtgatgcgttaacctgtagttggtcttaagaatctaggctttggattttccaacgagggtctttttgtttgatcagattttgatctggcctacagcttgaatttttgttccttccaagattgggtgtctggtcttttctttgccatgaggaacccgtttatttaccaacgaattagttacactaatccttatttgtctaaacctgctctttgcaactaatattactacagcatcaatcttattctaaaaacaaatagggttcttcaatcctacattaccacttgtgttcttattgttatagtggtgttaatgatatattatattattgtgatttgttttgctaaacagcatcatctgcttttgtagaattaattaagcaatacttaatatgggcaagtcaagcaagaaatctgctgttgaagttgcacctacctctgtctcagtctcagaggggaaatctgggaagaagggtaacatttgtatactcttgcctctcatgtcttattgtttattgcagttgttcagttctatctaaaattttttttataacaagcaggaaagagaaatgcagaagatgagattgagaaagctgtgagtgccaagaaacaaaagactgtacgtgagaaggttgtgccctcaaaggaggaagccaaaaaagtgaagaagcagcccccaccgaagaaggttgagagcagcagttctgaggaggattcttcagaatctgaagaggaggtaactagttcaatcttcctcaatgtagcttgctgatattctcttaatctgacttctgtttagagtcttagttcaatataggtattgtatatcagatgattgattgctttgcttactattataagattcatggtatttgtgaccttgaatgctcaggattaaaattggctgatattttctccgaccacctgttttatctcagtagcttgcactatatctcagtatttctcctatatttatacaacttttatattttattatttatactatctcgtttgactttcttcttgaatgccttgggctaaagtgttattacaaatgtttgctttgaggaactaatgaattttttggaggaactaatgaatcagtagaagtagcagaaattgtattattatctatatgctgtcaagctgtaattttgacctctgagattgaatagtttgaacattggttaaacagtagaagttttcctcttttgcctcagtctcatatgaaaataggtcatttcatattgaagatgcatgttttctttcgttaactgtttattttgtgtagtttcgtgtgttccaaattataatgaacatggagttttttttttctttgcactgctttcttcctattaattattttcaaaattctttgcaggtaaaggcccaaccaaagaagactgtccaaccgaagaaggctgcacaacctgctaaagaggagtcaagtgatgatagcagtgatgatagctcctcagatgatgtatgctttttttatctgttttttgcgagtgggttttgtttacttttgttgctaagaagcttatggtttactttttatttttctaatccaggagcctgcaaaaaaacctgttgctcgtccaaataaggctgcactttctaccaacagtagcagcagtgatgatagcagtgatgagagtttatcagatgatgaacctgtgaaaaagcctgctgcccctttgaagaagccagttgcacttgctaccaatggatcaaaaaaggttgagacagacagcagcagctctgatagcagctctgatgaggagtctgatgaggatgataaagtgagtatttgtttcccattttaacttggaaggacagtattcattgtttctttctcttcattcatcattggccaaacctattgtgctgtaccatctctattttgctatcatgaatatgatttgtaaaatttgagattttattactaccagctatattagtttcttgtttgatctattctttgtctatgtgcatatcatctgcatatgcattattgtaagatttaatatcccctgatttttaatgctcttggttctgaagctttacatcttacaccaacagttcagcagagctcataaagttatatgttctgtttcagtattttgtgaatttcgtatcatcaattatatcggtcatatgatacattattatgctaaatatatgaaggacagtatgtataaaaggcagttcgatgtgcctgaatttctaccaaatctttgaattgaacacatctgtttggttgacttgaagcgttgcaatttctacactgttcttctgtttctcttcttggttcttgttccagaaaatctttttgtctcattacactaacaagcttgttgcatatccttgatttcagaaaactgctgctccagtgaagaaaccttcagttgctgctatacaaaagaagacccaggagtctgacagttctgatagtgactctgattctgaatcagatgaggtaagcgaccatacaatttgtgttgcactgctatgtaagattccaagtgctcgggtggcacacagctattgcttcccttctcctgatattatgacttaatatttggagtgttgatagaagatgtttacataaaatatgtttcttgatctgactagagcaatatctacaggatgtgccgactaaagcaccagcagtagccaagaaaaaggaagaatccagtgaaagctctgattctgaaagtgattcagactctgatgatgaggtgggcaccttaatactgttatagtgatgttgacagaggctttgttatccatagatattttttttgtatgcaattacattgcctgtgaaggctgctaaaacaattattcctgccaaggctgctgctgttaaaaaggaagaagaatccagtgatagctcagacagtgactctgaatctgagtctgattctgatgaagtacgtgtgctagcacttgttacttttgattactaattgttgtgcaatattaaaatcttacccaatgtcttgcagccagcaaaacctactattcctgcaaaaaggccactgacaaaagacacaaagaagggacaagtatgctttctttttctgaagtttgtttccaagtacgagtaaaattgtctcatgtgctatttttcctgtgataatcttggcctcttgggggtacacctcgttgcagtccaaggatgaatctgaagatagttctgatgagagttctgaggaaagtggtgatgaacctccgcaaaagaagattaaggtacttatttttctttttgttttgcacattttaatgtttttttattcatgattacaattgctatctcttcggactccaggattctacaacttctggtactaccaagccttcccctaaggctaccaagaaagaaatcagcagtgatgacgaaagtgatgaagatgacagttctgatgaaagctctgatgaggatgttaagcaaaaacaaactcaagctaagaaggtggtctgcagacttaagacgcctaggtttttctcatttatgtatgtggttactctttaactctatgttgttgttgtctgaaattgtagcaagcaccagtagcacaagagagtagcagctccgatgaatcttctgaagaagatagtgacatggaaagtgatgaaccagcaaaaactccccaaaagaaggtactgtatattgtaaaattcgtgcatatgatttctttggacatcacattgttcttcaactatagcagatttatgttagtaaaagcttctttatccttcaggaaactgctgtgtctgttggttcgaataagtctgcgacaaaaccgggacaagaggaagtatgtttccactcttgatactgttattctgcaatgttatcttttatgtttgatgtctgttggagaatcagttttaacctcattaattgcagccaaaaacgcctgccagcaaccaaaatcaagctaccgggtcaaagactctttttgttggaaatttaccatacaatgtggagcaagaacaagtgtaagtttgtgaaatgtgtttataattccttctgtctcaaagctatgtctgctaatttcattgttcacttcctgtaggaagcaatttttccaggaggcaggtgaagttgttgatattcgtttcagtacctttgaagatgggaacttcaggggctttggacatgttgaatttgccacagcggaagctgctaagaaggtcaacatcctcatcaatattttttggtgacttattcagtatataatatattggttccatggacatgaagaaagcagtttattgccaccaagtttagccaatcaaacttattagccatcaattgttttattttcaggcacttgaacttgctggtcatgacctgatgggacggccggtcaggcttgacctggctcgtgagagaggcgcgtatactcctggcagcgggtaattccttatcttgtgttgtatgcatcagaaaagaaaaaaagaattcaaatatgctttggaaaagatcgttgtttgtctttcgcaatgtaaatggggccatgatagttttgtgtaattgctcaggagggacaatagttctttcaagaagcctgctcaaagctcaggaaacactatatttattaaaggctttgatacttctcttgacatacaccaggtaagttccattttatcctcacggtgctgtattagaaatttttactgattgtgttgtctacttttctttttctgaacatgcactatatgtttcatctgcttttttctttactagatccggaattcacttgaagaacattttggctcgtgtggagagattacacgggtttcaattccaaaggattatgaaaccggtgcaagcaaagggtcagttgcctctgttacgtttatttaacacattacactttgttaatgccctttgcggaacacagtattctcttcgtttttgacccctgcacttggtgtagccctatctattatcgtcactgacatgtggcttgcttcctgatgcaggatggcgtacatggattttgcggacaacggttccttgtcgaaagcatacgaactgaatggatctgacctcggtggatacagcttgtatgttgatgaagcgaggcctaggcccgataacaacagagagggtggcttcagcggtggaagagactttaacagcagtgggagaggaggaagacgtggtggacgtggtgatggtagccgtgggcgcggtgaccgtggacgtggtagaggctttggtaggggtgacaggggccatggtggacggggtacaccgttcaagcagagcgctggtacacctagtgcaggtaaaacttctaccgcaccaaattgcaatttacccagcttttacactcgctgcttggacttgatgtaggataagtggagctgtcataattaatactatttgctttcttatctgcaggaaagaagacaacattcggtgacgacgactagacgaacaatttgagccgattttgttctagtactgtagtaatctccatcccccctaatatatgcgattctagtgagccgtgaattggctacctccggactgttacattctagccgtgttatgtactttgttggcagttgggaccgtgttggtaaatttgcccgacagatttggcaattttgg</dnaseqindica> 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