Os04g0622700

From RiceWiki
Revision as of 19:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0622700

Description

Bromodomain containing protein

Version

NM_001187169.1 GI:297723468 GeneID:9266809

Length

3427 bp

Definition

Oryza sativa Japonica Group Os04g0622700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32044203..32047629

Sequence Coding Region

32044203..32044261,32044359..32044473,32045320..32045409,32046826..32047629

Expression

GEO Profiles:Os04g0622700

Genome Context

<gbrowseImage1> name=NC_008397:32044203..32047629 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32044203..32047629 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggaagcggtgcgaccagatcctggcgaagctgcggaaggacaagcggagcatctggttcaacgcccccgtggaggtcgaccgcctcggactccaagactaccacgccgtcatcaagtgccccatggatctcggcacggtgagggcgaacctcgccgccggaaggtacccctcgcacgacgacttcgccgccgacatccggctcacgttcagcaacgcgctgcggtacaaccctgctggacacgaggtccacaccttcgccggcgacctcctcgcgtcctttgagaagatgtacaaagcgtcggtgtcttggttcgagcaggaactcaagatccttgagccgccgatgccagtgccgccaccggaattgccaccggcgaaagctccggcgcaggtgaaaccaagggcagggaatgtgaaaatgcggaaaacgaaggcaagggagccgaacaagagggagatgaccctggaggagaagaacttgttgagggttgggttggagagcttgccagaggagaagatgcataatgtgttgcagattgtgcggaagaggaatggcaatcctgagctggttgggggtgagatcgagctggatattgatgagatggatgtcgagacacagtgggagcttgatcgattcgtcaacaaattcaagaaggcgctcaacaagagtcgacgggctgccattgttaatggtgaaaatgccgatgtcattgatgcttccgtggctaatgatagtgatatgctggtgaatggcagtaccgctacgatggtggacaacggtgatgtgacgatggcaatagagagcaaggatcctgacaagatcactacacaggccgagcagttggatgagtatgtagatgcagtggcggacccagaatttttgtcctggccctgggtccgcccctgtgtagatgtcggggatgaaatgccaacagcaacttaccaatcagtggagattgagaaggatactgaggccgcgagcagtgggtcctcatcatccagtgattcagggagctcaaaggacagtgtctcagaatctggcaatgcccattctctggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMD LGTVRANLAAGRYPSHDDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKAS VSWFEQELKILEPPMPVPPPELPPAKAPAQVKPRAGNVKMRKTKAREPNKREMTLEEK NLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNKF KKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIESKDPDKI TTQAEQLDEYVDAVADPEFLSWPWVRPCVDVGDEMPTATYQSVEIEKDTEAASSGSSS SSDSGSSKDSVSESGNAHSLV</aaseq>

Gene Sequence

<dnaseqindica>3369..3427#3157..3271#2221..2310#1..804#atgcggaagcggtgcgaccagatcctggcgaagctgcggaaggacaagcggagcatctggttcaacgcccccgtggaggtcgaccgcctcggactccaagactaccacgccgtcatcaagtgccccatggatctcggcacggtgagggcgaacctcgccgccggaaggtacccctcgcacgacgacttcgccgccgacatccggctcacgttcagcaacgcgctgcggtacaaccctgctggacacgaggtccacaccttcgccggcgacctcctcgcgtcctttgagaagatgtacaaagcgtcggtgtcttggttcgagcaggaactcaagatccttgagccgccgatgccagtgccgccaccggaattgccaccggcgaaagctccggcgcaggtgaaaccaagggcagggaatgtgaaaatgcggaaaacgaaggcaagggagccgaacaagagggagatgaccctggaggagaagaacttgttgagggttgggttggagagcttgccagaggagaagatgcataatgtgttgcagattgtgcggaagaggaatggcaatcctgagctggttgggggtgagatcgagctggatattgatgagatggatgtcgagacacagtgggagcttgatcgattcgtcaacaaattcaagaaggcgctcaacaagagtcgacgggctgccattgttaatggtgaaaatgccgatgtcattgatgcttccgtggctaatgatagtgatatgctggtgaatggcagtaccgctacgatggtggacaacggtgatgtgacgatggcaatagtgagcagcatgctttgttcttggttgctattagcttatgtgtgaaatgagctcttataatggttaactagcatggtggtccgcgtagattacgcggctagcatcattatattttctcttatataatatcatatatattttctcattatattattaaaatatattacaatgacaacataattttaaattttgcaataacttttcaaaactactaatgtataataactactctagtctcctcttctaatattccttattttttaattctgaatttcagctatttctaaattgtatttctatatggactctgctttttctttttttctgattaatgtgagaatttctagaccatgagagcgaacgtggaggctactttttattccgaattttagttggttttaaattccaatatgaactctatactctacttatagtattccttattttttaatttcaaatttctattttttttcttaattgtatttctatatggactctatactctacttctaatatttcttatttttaattccgaatttcggttatttcttaattgtatttctatatggactctatactctacttctaatattccttatttttaattccgaatttttgttatttcctaattgtatttctatatggactctagtctcctgttctaatattccttattttttaattccgaatttcagctatttctgaatcatatttctatatggactctagtctcctcttctaatattccttattttttaattccgaattttagctatttctaaattgtatttctatatagactctagtctcctcttttaatattccttatttttttaattctgaatttcagctatttctgaattgtatttctatatagactctgccttttctttttctccgattaatgtgagaatttctaggtcatgagagcgaacgtggtggcttcttttttttttccgaattttagttagttttaaattcctatatggactctatactctacttctaatatttcttattttttaattccgaatttctattttttttcttaattgtatttctatatggactctatactctacttctaatattccttatttttaattccgaatttctattatttcctaattgtatttctatatggactctatactcctcttctaatattccttattttttaattccgaatttcaactatttctaaagtgtatttctatatggactctagtctcatcttctaatattccttattttttaatttcgaatttcaactatttctaaattgtatttctatatatggactctgtttttctttttcttcgattaatgtgagaatttctaggccatgagagcgaacgtggaggctcctttttctattcctttaattgtataatagatgtgttttgttgtttacaggagagcaaggatcctgacaagatcactacacaggccgagcagttggatgagtatgtagatgcagtggcggacccagaatttttgtcctgggtttgcccatgctagctatcaagagaggcaaatcaaacactatatgcacatgatgacacaaatatagtcttaattttaggaaagtattggtgtatcctgagggtgaattgaagaacaaaataacacaactcactttgttcagttactttccctccctgttctaaggtttcccatcaccattagaaatgtgaagcatagggcatggcctgatgaagcagaatctaatggtgctttgctaaagaaagaaaaagaatacccatattcttcttcgtattctaatctgattgattcaacttgatctcagcgtacaaatcacaaaaacatgtattcaatttttgaagtttgtactctcattgatttcacttgttagctcattatagttttcaattttcaatcaatctatgtctccatctgttaagaaaaaaaaatcagagagacaaagaactgaagaagtttgagtatacttggacatggacagataatgagtggaactggaccaggtgatttagtcagcgcctagcccagtgaccggcagcctctgccaccggtgctcgctgtccggccgcagcgccacgacgctcaaaccgtccatgcgtcgtgcttgccatgaggctgccgatcaatgatacagtgccacagcgcgccacgctgtcgcagcgccgccaacgcctgctccaaaccctaccgcatgagtgctagccaaaggggaacatcatcttctggtgggctgtgcaacagctagacttttacttcttgggcttttgcttagtttcagcccactgatgcatactgcctactaaatcttttccgaattttctgggtatgccggtgcatacccggcaccagccctgggtccgcccctgtgtagatgtcggggatgaaatgccaacagcaacttaccaatcagtggagattgagaaggatactgaggccgcgagcagtgggtcctcatcatccagtggtacgatcgaactgtcactttataatttgaacatccaacttcttgatgaacggaaggttttgggttgtgtcttatttgatttttgttactggttcagattcagggagctcaaaggacagtgtctcagaatctggcaatgcccattctctggtgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0622700, RefSeq:Os04g0622700