Os04g0625700
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0625700 |
|---|---|
| Description |
TRAF-like domain containing protein |
| Version |
NM_001187171.1 GI:297723472 GeneID:9269901 |
| Length |
3644 bp |
| Definition |
Oryza sativa Japonica Group Os04g0625700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:32213642..32217285 |
| Sequence Coding Region |
32213642..32214182,32215590..32215612,32215796..32215877,32216156..32217285 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:32213642..32217285 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:32213642..32217285 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagcatgtccctccatggactctgtcgcctgcacaccggagtagggaggttgaggatgaggcagaccgagacgacggcgaggcggcggtgtggggcgcagagggccgtcagccccaaatcgaggaggcagtggtcgacgtgcgggcgccccctggaacagcgccgccgccgacgcctgcgaggaagaggacggcggctgcatcgccgcttggagcaacgccggcgcctgcgcctgagaggaagggcatggccgctgcatcgctgcctggagcaacaccgacgccgacccctgtgaccaagaggaaggggacgaccgctgcatctccgcgtggaactcagtcaacgacgcctgcgaggaaggggttggccgttgcttcgccgcctggaaagccgctgccgacgcctgggaggaagaggaattttgttgctggcgactggcgaggagggcgagaaaaggagcgcgggaacaattttccccctacgcgcgcgaggcagcgacgaccgcgattgggaagaaaaaatggttccctgcaaatgaggtaccggtggctgcatcgtctgggttctgattatgggcaatcctccacaaccaatatagcacctagccgctacgagttcatggcctcgccgccatcctctcccttggcagacatgttgacttcatcggctgcccgtacgtcctcacggagcgtgtgggagggcatcaccgggacgcacgacttcgaggtggtcggctactcgttgatggacggcttcggcgccggaaggcacgtctgctccggcgacttcagcgtcgccggccatgactggtatgtcgcgttctaccccgatggcctcgaccaggattccgccggctacgcgtcggcctgcctcgcctaccgcggcaaggagaggctcgtgagagccaagtacagcctgagcttggtggccagggacggcagggcgtcgccgctcgccggcgacacgctgcggtcgcactacttcacgccgacgagccgcagcgccgacgtcctcaagttcgtcgagaaatccaacctgtcgtcgtcgccgtcgtcgtcgtcgtactcgtgcctcgacgacgacaccctgaccatacggtgcgtggtcaccgtggtcaccggcccgcgcgtggtgagcgtcgcgccggccaaggagaggggcccccgcgtcacggtgccgccgccgagcctccacgagcacctggcgcggatgctgcgcgacgggcggggctcggacgtggcgttccgcgtgggcggcagggtgctccgcgcgcaccggtgcgtgctcgccgcgcggtcgccggtgttcgacgcggagctcctgggcccgatgatggagaccaccgctccgtgcatcgagatccacggcgtcgagcccgccgccttcgaggcgctcctccgcttcgtctacacggacagctggccgctcgccggcgtcgacgtcgcggcgacggtgcgcctgctctccgcggcggacaggtacgggctggagaggctgcggctgatgtgcgaggagaagctgcacgagggcatcgacgtggacaacgccgccgacgtcctcgccatggcggagctccaccattgctcgcagctcagagacgcctgcgtcgcgttcattgcctcgccgagcacgctgggtcccgtcctggcgtcgagcggcttcgaggatctcatcatggcgaccggcgcttcggtgaccaaggagattttgcacaaggtgtccgaatcgtggagcggtcctggtaacagaaataattcaagcaaaagaaagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MEHVPPWTLSPAHRSREVEDEADRDDGEAAVWGAEGRQPQIEEA VVDVRAPPGTAPPPTPARKRTAAASPLGATPAPAPERKGMAAASLPGATPTPTPVTKR KGTTAASPRGTQSTTPARKGLAVASPPGKPLPTPGRKRNFVAGDWRGGREKERGNNFP PTRARQRRPRLGRKNGSLQMRYRWLHRLGSDYGQSSTTNIAPSRYEFMASPPSSPLAD MLTSSAARTSSRSVWEGITGTHDFEVVGYSLMDGFGAGRHVCSGDFSVAGHDWYVAFY PDGLDQDSAGYASACLAYRGKERLVRAKYSLSLVARDGRASPLAGDTLRSHYFTPTSR SADVLKFVEKSNLSSSPSSSSYSCLDDDTLTIRCVVTVVTGPRVVSVAPAKERGPRVT VPPPSLHEHLARMLRDGRGSDVAFRVGGRVLRAHRCVLAARSPVFDAELLGPMMETTA PCIEIHGVEPAAFEALLRFVYTDSWPLAGVDVAATVRLLSAADRYGLERLRLMCEEKL HEGIDVDNAADVLAMAELHHCSQLRDACVAFIASPSTLGPVLASSGFEDLIMATGASV TKEILHKVSESWSGPGNRNNSSKRK</aaseq> |
| Gene Sequence |
<dnaseqindica>1..541#1949..1971#2155..2236#2515..3644#atggagcatgtccctccatggactctgtcgcctgcacaccggagtagggaggttgaggatgaggcagaccgagacgacggcgaggcggcggtgtggggcgcagagggccgtcagccccaaatcgaggaggcagtggtcgacgtgcgggcgccccctggaacagcgccgccgccgacgcctgcgaggaagaggacggcggctgcatcgccgcttggagcaacgccggcgcctgcgcctgagaggaagggcatggccgctgcatcgctgcctggagcaacaccgacgccgacccctgtgaccaagaggaaggggacgaccgctgcatctccgcgtggaactcagtcaacgacgcctgcgaggaaggggttggccgttgcttcgccgcctggaaagccgctgccgacgcctgggaggaagaggaattttgttgctggcgactggcgaggagggcgagaaaaggagcgcgggaacaattttccccctacgcgcgcgaggcagcgacgaccgcgattgggaagaaaaaatggttccctgcaaatgagtaacgacatatacggatatgggaacatggattattgggatgttggttagggaatttgttggatgagaattttggttaaaatttctttaatttaaggatagggaatagaataagtaatctgttgggcatgctctcagccctgaaacttaacctgaacagatatttgcagtcagggccgttctagactgctcctagttggcttagctacttccttgtacttcgtgagcacacgctatcaaaatgttctttttttcaaatgttttctatatataactttcttaaataaataaataaataaatctatttttaaaatttgtaatagctactccctccgtccctaaatatttgacgcagatgacttttttaaacatgtttgaccgtccatcttattcaaaaaaatttaagtaattattaattcttttcctatcatttgattcatcattaaatataatgatgagatgtgagggaggaaggaactccctcttttttaatacctgggtagggtggctttactttgcctacgtaaatcccaaccatctgtcttcatttaagatctaatctccaattaaatttcctatcaattcccaccacctctaccaatcaacgtaaatctcaaccatctctttttatttaagatataatctcccattaaacttcctatcaattcccaccacctctaccaatcaagagattgagagtaaaaaatcaaattcttatgttaatctcataatcaattctctcatctaaacctccaatcctttctcttaaattgccaaacagaattctctcatctaaccctccaatcttttctcttaaattgccaaacagaccgtcaactcctccgaacggagactaaatattgttttttttcttccgaacaagatgtacaccttttatgtccccttttttctcgatggtgcatccagatggcaataaatagcgtcccatgctgttcaaaacttcagaggatgcaacctgaaccacaccccattttttctctgaacattcagactgcctctgttcgtacccctgtactactgagcaggctaggctgtatgaaaggcatcgacatggactcatggtcaccaccatagcgttcgcggagcagcagtgtagcaccggagctcgtgtctctgggcagcctgcgacacaagagtggcgccatgatcagttggattaagctcagattgtcaccttgtcacacgtatcgtctcgttcgcatgatcaggacttcttttgactcccgagttgtgatttggaggttgaaacggatcaggactatagtatccaataccataaattatctcttcttggatcaactcgtcgagagagattaaacggcaacgcgtggtatccaataccataaaagcatcttgcagtctatcgacgaggctctctcttcggcagggtaccggtggctgcatcgtctggtatgcggtatttcaaactctcgttgctcttaattgaatttgttataaatattagtcgatatagcggaacgataactaatcttcccgatcgcttcagtcattgaccacacaagacatgctaggtgacgacataggaacacacaatatttgttaacaaactttagctaaagtctacatctctagggttctgattatgggcaatcctccacaaccaatatagcacctagccgctacgagttcatggcctcgccgccatcctctccctgtgtgtctacactacattgcagtcctcataattacattatggtacccctctctatttaagagagttgccggttacagagccagagtccgactttaactctacccctaccatctattataactctaagtccaactataaccatatacacctattctaacataatcgatttgatttaaacatgcgcttgtttcatccaataaaagaagtgtctttgttgctagattagatttgacaaacaaaatagcacaattgcatcctctttttgtcaattcttgcagtggcagacatgttgacttcatcggctgcccgtacgtcctcacggagcgtgtgggagggcatcaccgggacgcacgacttcgaggtggtcggctactcgttgatggacggcttcggcgccggaaggcacgtctgctccggcgacttcagcgtcgccggccatgactggtatgtcgcgttctaccccgatggcctcgaccaggattccgccggctacgcgtcggcctgcctcgcctaccgcggcaaggagaggctcgtgagagccaagtacagcctgagcttggtggccagggacggcagggcgtcgccgctcgccggcgacacgctgcggtcgcactacttcacgccgacgagccgcagcgccgacgtcctcaagttcgtcgagaaatccaacctgtcgtcgtcgccgtcgtcgtcgtcgtactcgtgcctcgacgacgacaccctgaccatacggtgcgtggtcaccgtggtcaccggcccgcgcgtggtgagcgtcgcgccggccaaggagaggggcccccgcgtcacggtgccgccgccgagcctccacgagcacctggcgcggatgctgcgcgacgggcggggctcggacgtggcgttccgcgtgggcggcagggtgctccgcgcgcaccggtgcgtgctcgccgcgcggtcgccggtgttcgacgcggagctcctgggcccgatgatggagaccaccgctccgtgcatcgagatccacggcgtcgagcccgccgccttcgaggcgctcctccgcttcgtctacacggacagctggccgctcgccggcgtcgacgtcgcggcgacggtgcgcctgctctccgcggcggacaggtacgggctggagaggctgcggctgatgtgcgaggagaagctgcacgagggcatcgacgtggacaacgccgccgacgtcctcgccatggcggagctccaccattgctcgcagctcagagacgcctgcgtcgcgttcattgcctcgccgagcacgctgggtcccgtcctggcgtcgagcggcttcgaggatctcatcatggcgaccggcgcttcggtgaccaaggagattttgcacaaggtgtccgaatcgtggagcggtcctggtaacagaaataattcaagcaaaagaaagtga</dnaseqindica> |
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