Os05g0209400

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Revision as of 10:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0209400| Description = Similar to Nudix hydrolase 15, mitochondrial precursor (EC 3.6.1.-) (AtNUDT15)| Version = NM_001061445.1 GI:115462620...")
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Gene Name

Os05g0209400

Description

Similar to Nudix hydrolase 15, mitochondrial precursor (EC 3.6.1.-) (AtNUDT15)

Version

NM_001061445.1 GI:115462620 GeneID:4338090

Length

2479 bp

Definition

Oryza sativa Japonica Group Os05g0209400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6748554..6751032

Sequence Coding Region

6748641..6748929,6749026..6749168,6750410..6750529,6750641..6750865

Expression

GEO Profiles:Os05g0209400

Genome Context

<gbrowseImage1> name=NC_008398:6748554..6751032 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6748554..6751032 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcctctcctcgcccgcctcttcgccccgacttacattgccatgggtttctcctcctccgcgtcgccgccgtcccggcggcttgcccacctcacacgccacctcctcctcagctccggcgagctctcctcctcggtgggcgcccccgccgccgccgcccggccggcctacctcgccgcccccaagggctacgccgccgtgctggtctgcctcttcgaggacccccacggcggcgacccccgcgtcatcctcaccaagcgcgccgcctccctctcctcccactccggggaggtgtcgctgccgggagggaaggtggaggagggggatgcggatgcgacggcgacggctctgcgggaggcgaaggaggagattgggttggaccctgcgcttgtttctattgtcacagttcttgagcccttcttgtccaagaacggactccatgtaactcctgtaatcggcattctttcggataaagctttattcaagcctgtcttgaatgaatctgaagtggcagacatctttgatgcacctctagagatgttcctgaaggatgataaccggaaaacacaagaatcgaattggatgggcatgaatattccagtccagtcttttgagtaccagtcagaggacaaaacgtttgtgatttggggcttaacggcacacattctgactcgtgctgcagcagtcgttttaccgagagaaccatcatttgttgaatttcgaccaagatatgtgaactcaccctctggagatacgaatgaaacaaaacgctga</cdnaseq>

Protein Sequence

<aaseq>MRPLLARLFAPTYIAMGFSSSASPPSRRLAHLTRHLLLSSGELS SSVGAPAAAARPAYLAAPKGYAAVLVCLFEDPHGGDPRVILTKRAASLSSHSGEVSLP GGKVEEGDADATATALREAKEEIGLDPALVSIVTVLEPFLSKNGLHVTPVIGILSDKA LFKPVLNESEVADIFDAPLEMFLKDDNRKTQESNWMGMNIPVQSFEYQSEDKTFVIWG LTAHILTRAAAVVLPREPSFVEFRPRYVNSPSGDTNETKR</aaseq>

Gene Sequence

<dnaseqindica>88..376#473..615#1857..1976#2088..2312#aaaaatcctgtgggggaacctcgccggcgatccctccaaagcccagaagcgacgccgccgccgccgccgccagccgccacgttatccatgaggcctctcctcgcccgcctcttcgccccgacttacattgccatgggtttctcctcctccgcgtcgccgccgtcccggcggcttgcccacctcacacgccacctcctcctcagctccggcgagctctcctcctcggtgggcgcccccgccgccgccgcccggccggcctacctcgccgcccccaagggctacgccgccgtgctggtctgcctcttcgaggacccccacggcggcgacccccgcgtcatcctcaccaagcgcgccgcctccctctcctcccactccggtctatatgagcacccaaagctgggatccttttttgaagaattttcttgctaaatatctcattggatttgttcaatttattgtggaaaattgataggggaggtgtcgctgccgggagggaaggtggaggagggggatgcggatgcgacggcgacggctctgcgggaggcgaaggaggagattgggttggaccctgcgcttgtttctattgtcacagttcttgagcccttcttgtccaaggtaaacccatttttttttcaagtactcttggcatggttgcgaaatctaggtaatgttaggttatagcttttacctatgaattttagtggtttgaatgtgcttttgttacattgcctgtgtgggatggaagtgaaaccatcgtcgatacaaagaggatcggtagttagtcgatctagtgtaaatcctactgaattgcaggaagtggcagtagctgtgctgccagagcagcagctatatagtgcatgttgcaggtcaaattctgttatagtattgagttgatatgagatatttgtaatattttagcttttgagccccagtcttaatatgctgaatggtttatgtgtactgcatctgcatgcctcagattgttcagagaaacagaaagtgtgaagcattagcgaatgagtcaatcacagaagtcatgtgattttttttaccttgttcttagcatgtgttagatagtgctaataaaagtagaaaccaatatgatgatcgatggattttgattcattcagagacaataattcaataaagagataatgaaaatatgcttgctagttcatttgatctctgtttgccattttatcgcttgtttgtgtattgctgatatgccaatgccatatcacatttctagtcccaaggcgttatataactgacttgtgagaatataagtttacgtgcatggccaactgcgaatgtcttggttttcaactaataacaaccaaaagttcttgcatactttggtgcttcatctggttattgctgttttcttgacaaataatactctaaataactactcaaacacatgtgtccatccaagttcatctaaattaccttttttagtcacctgagcttggtacaacttgtcatctcttccccaagaacaggtgctctttcactctagtaaagtcaggccacttacctgtttcttacactaaattattatggttgctatctgatataagctgtgtgagtttttggaaccctgcctttgtgcatcaaatttccctttgtaatatcaagtaatctataactgtagtcccatgctcagaccccaccgttttctgtccttagaggagagatttccaattaacatctcactcttatattaaaatactgataaaactatttgctctatatggctttaattgagtaattattgatttccaagataacacattctttgacacattcaatagaaatgcaaactatccagaactcatagtacagtcattttgtagaacggactccatgtaactcctgtaatcggcattctttcggataaagctttattcaagcctgtcttgaatgaatctgaagtggcagacatctttgatgcacctctagagatgttcctgaaggtattactgttatttatcgatgttactcttctccttttatattcatcatcaacttcttgttgtcgacaagggcattgttgcatctagctctcatttctaccatacctttaggatgataaccggaaaacacaagaatcgaattggatgggcatgaatattccagtccagtcttttgagtaccagtcagaggacaaaacgtttgtgatttggggcttaacggcacacattctgactcgtgctgcagcagtcgttttaccgagagaaccatcatttgttgaatttcgaccaagatatgtgaactcaccctctggagatacgaatgaaacaaaacgctgatgcaataccataatcatcaatatgtaattctagcatttatcccctccattcagaggcagctgcttgtgcctgtctatagaaaatcagcttactgtactttttgtatgtacacgatagtccatagaatgttgcatcatcagcatgttggaaaatttgtcaatttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0209400, RefSeq:Os05g0209400