Os05g0209600

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Revision as of 10:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0209600| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001061447.1 GI:115462624 GeneID:4338092| Length = 3737 bp| D...")
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Gene Name

Os05g0209600

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001061447.1 GI:115462624 GeneID:4338092

Length

3737 bp

Definition

Oryza sativa Japonica Group Os05g0209600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6769736..6773472

Sequence Coding Region

6769795..6770050,6770130..6770336,6770521..6770669,6771081..6771354,6772996..6773213

Expression

GEO Profiles:Os05g0209600

Genome Context

<gbrowseImage1> name=NC_008398:6769736..6773472 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6769736..6773472 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctttacacgttcgtgataatggcggcgctgctgctgctggcggcggcgatggtggtggtggtgttcgcgcacgcggcggcggcgcagcggtacaatgctatctacagcttcggcgactccatctccgacaccggcaacctctgcgtcggcggctgcccgtcgtggctcaccaccggccagcccccctacggcaagaccttcttcggccgccccaccggccgctgctccgacggccgcgtcgtcgtcgacttcctcgctgagcactttgggctgccgctgccgccggcgtcgaagggcggcggcgacttcaagaagggggcgaacatggcgatcatcggcgccacctccatggacgccgccttcttcaagtccatcggcctcagcgacaagatttggaacaatggccccctcgacacccagatccagtggttccgtcagctcctcccctccgtctgcggcaacgattgcaggagctacctgtccaagtcgctgttcgtggtgggcgagttcggcggcaacgactacaacgcgccgctcttcgccggccgcgccatgacggaggtcagggactacgtgccacaggtcgtcagcaagatcatccgtggcctcgagacattgatcaggatgggcgcggtggacgtggtggtgccaggggttctacccatcgggtgcttcccgatctacctgacgctctatggcacatccaacggtgcagactacgatcgcaatggttgcctcaagagctacaatagcctctcctcctaccacaacacgttgctcaagagaagcctctccaacctccagaggacgtacccacatgccagggtcatgtacgctgatttctactcgcaggtcactgctatggtccgctctccccaaaacttcgggctgaaatacgggctgaaggtgtgctgcggggcgggagggcaggggacgtacaactacaacaacaaagcgcggtgcggcatgtccgggtccagcgcctgcgccgacccggccaactacctcatctgggacggcatccaccttaccgaggccgcctaccgctccatcgccgatggctggctcaagggcccctactgcaaccctcccatcctccactga</cdnaseq>

Protein Sequence

<aaseq>LYTFVIMAALLLLAAAMVVVVFAHAAAAQRYNAIYSFGDSISDT GNLCVGGCPSWLTTGQPPYGKTFFGRPTGRCSDGRVVVDFLAEHFGLPLPPASKGGGD FKKGANMAIIGATSMDAAFFKSIGLSDKIWNNGPLDTQIQWFRQLLPSVCGNDCRSYL SKSLFVVGEFGGNDYNAPLFAGRAMTEVRDYVPQVVSKIIRGLETLIRMGAVDVVVPG VLPIGCFPIYLTLYGTSNGADYDRNGCLKSYNSLSSYHNTLLKRSLSNLQRTYPHARV MYADFYSQVTAMVRSPQNFGLKYGLKVCCGAGGQGTYNYNNKARCGMSGSSACADPAN YLIWDGIHLTEAAYRSIADGWLKGPYCNPPILH</aaseq>

Gene Sequence

<dnaseqindica>60..315#395..601#786..934#1346..1619#3261..3478#atccatcgtcctagctatctcacgtagtctccctctcccggtcttcgcgacgacgctagctttacacgttcgtgataatggcggcgctgctgctgctggcggcggcgatggtggtggtggtgttcgcgcacgcggcggcggcgcagcggtacaatgctatctacagcttcggcgactccatctccgacaccggcaacctctgcgtcggcggctgcccgtcgtggctcaccaccggccagcccccctacggcaagaccttcttcggccgccccaccggccgctgctccgacggccgcgtcgtcgtcgacttcctcggtaggacgacgtcctgatcgatcgatcgatcgagctagtagtggagaaaatgacatgtgaatttcatgcatatatgcagctgagcactttgggctgccgctgccgccggcgtcgaagggcggcggcgacttcaagaagggggcgaacatggcgatcatcggcgccacctccatggacgccgccttcttcaagtccatcggcctcagcgacaagatttggaacaatggccccctcgacacccagatccagtggttccgtcagctcctcccctccgtctgcggcaacggtaactaactaattattcaacatcttattatttaccacagtaactaccactgtaattaatgatccaattcattgattagtcgtctcaccaacaactaccagtatatatgtgcatgtggagtaattaattaattaattaattaacggacgaattgatggatcgatcggatcacgggtgtgtgtagattgcaggagctacctgtccaagtcgctgttcgtggtgggcgagttcggcggcaacgactacaacgcgccgctcttcgccggccgcgccatgacggaggtcagggactacgtgccacaggtcgtcagcaagatcatccgtggcctcgaggtaactaaccaactaacctgatcatttcacgctctccacctgatcaactcacgagagttggatcacggatgactccaaaatggaaaaaaaaacaaattgtccgccaaacagtctatttcctccttcctacagtatcagattaatttcacacaaactatttttttatatagaaattgccctataatatcaaatatatcttttttcaagttaatttgtaataattaaaactcaattgatcattcgctaatggctttcctgttttaaatgcccttacgtacttaatcttaatctttatctatcttaaattaagcctaaattactatattttaggatagataaagtactttttttatcgtaactcgtataggcaacaaaacaatcatgtaaattttgcgcgcgacttgtgaacagacattgatcaggatgggcgcggtggacgtggtggtgccaggggttctacccatcgggtgcttcccgatctacctgacgctctatggcacatccaacggtgcagactacgatcgcaatggttgcctcaagagctacaatagcctctcctcctaccacaacacgttgctcaagagaagcctctccaacctccagaggacgtacccacatgccagggtcatgtacgctgatttctactcgcaggtcactgctatggtccgctctccccaaaacttcggtgagttgatcatactatttctcatctcataaccgcactaaaacatactacctccgtttgataaaaaaaactgtatttttgattatgcacctggacagatcaatatgtgattttttagaacggcgcattatattagtaaatcttgacttacctgtcgttttcttgtttatttgagggtcatggacttatcaatgatatgaaacctatcgctattttttctgttaggcttgattttttttttttttgcaaaatggaatttaatccagccttgttatggttgataggagataaccgttttataaaattttacaagctatttcgtaggaactaggaagcataatatttagatcagcctataaattctattttgtatagtagttaacagatcagccctgaacattactgcccagagctgcaaggcaccatcgttgtccggtagcacacatcacccttttatgtgctaaaaatcaaaagcgtcccagaatccagttgccgtgacagagttgaagttttcagtggtcacggcatgtttagtgtaggttagctaggggtacatggcccacacgtcagatctaggtaaaggatatatccaaaggttgttagagataagtataaattaatacactgtacgtgcataacaacaagctttacatctccaaatagtccaattacttgttggattcttagctcacttgtcctgttagtgtggcaaatgatttgtgccttccctgtgtggaccattcatgacctctgtccatatactagctagtacagtataatttaggaattgataccttgtaatccaattggaatggcatctatcatactatatcaaatactccctccgttttaaaatgtttgacaccgttgactttttagcacgtgtttgaccgttcgtcttattaaaaaaatttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaagaataaataattatttaaataagacgaatggttaaacacgtattaaaaagtcaacggtgtcaaatattttgaaatggagggagtattatgaaataataacaactggcatgatttatgtaatactagtgctaaagcatgcatgcatgtatcacagctagctagctcttctttgcatgcgacatcgtccaattgaaaacaaagataccctttggccaaaagctcatggccacaaattaaaacaaaacaaaggaacatgttcatatctttgcatgatcttgaaagttcaaaccctctcagccttgctctgcttgcaccactgcaaaagaacagagcacacattacaaagcaaaccgaaaaaacgacaaaaaaaaaaaacaacggcactatttgaaacatagaaatattattttatcaaagatagatttaaaaccgagcctctacatctaaactagatatacacagccaaataaataatgcaaaaatctgacactacatatttctgccattgtaaaactatttctagtgaaacatccgaaacacgtatatatgacatcaatttctaagataagtgaaaaattgtttacatctccggtatccaccgatcaatatatttatttggagagtgatattggttgctcaccttgttaatataatatggcagggctgaaatacgggctgaaggtgtgctgcggggcgggagggcaggggacgtacaactacaacaacaaagcgcggtgcggcatgtccgggtccagcgcctgcgccgacccggccaactacctcatctgggacggcatccaccttaccgaggccgcctaccgctccatcgccgatggctggctcaagggcccctactgcaaccctcccatcctccactgatttattaatcctacatgtataatatctgcagagagatgagatgtgacccaattaattgtgcactgtttgcttaattaggccgaagtgtgtgtttgtatttgtgtgtgggttaattaatatttgttcatggggtttacttaattagagtttggttgtgatttggagagggtgattttaagcctgatgatgtatttagttggggatcgaatcaaactgatccaagtgaataatgaagctcaaacaagggcttttccatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0209600, RefSeq:Os05g0209600