Os04g0632100

From RiceWiki
Revision as of 20:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0632100

Description

S-locus receptor-like kinase RLK13

Version

NM_001060521.1 GI:115460771 GeneID:4337111

Length

3323 bp

Definition

Oryza sativa Japonica Group Os04g0632100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32577370..32580692

Sequence Coding Region

32577474..32577776,32577863..32578013,32578105..32578342,32578443..32578653,32578738..32578919
,32578997..32579098,32579420..32580674

Expression

GEO Profiles:Os04g0632100

Genome Context

<gbrowseImage1> name=NC_008397:32577370..32580692 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32577370..32580692 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctgcctcccagttttcatctccttgctgttcctcatctcttcctgcaaaggcgatgaccagctcacacaggcaaatcgactgatctcccccggcgacgtactcatctccaaaggcagggtcttcgcgctcggcttcttctccccaacagcctccaaccagagcttcttcctcggcatatggtaccacaacatctccgagtccgagcgcacgtacgtttgggtcgccaaccgcgacaacccaatcaccaccccttcattcgcaacgctcgccatcagcaacagctctaaccttgtcctgtcggattccggcaatcacaccctttggacgacgaacgtcacggccaccggaggcgacggagcttacgcggcgctgctcgactcggggaacttggttctccggttgccgaatggtacaaccatatggcagagctttgatcacccaactgacacccttctgatgggcatgaggtttttggtgagctacaaggcacaagtcgccatgcggtgcatcgcttggaagggcccagatgacccctccaccggagacttctccatcagcggtgatcccagctcaaaccttcagatcttcctttggaacggtaccagaccatatatccgctttattggatttgggcctagcagcatgtggtcttcggtcttctcattcagtacctctctcatctacgaaacatcggtgagcacggatgatgagttctacatcatatacacaacctctgatggctcaccttacaagcgtcttcaactggactacacgggtaccttgaagttcctggcttggaacgacagcgcgtcgtcatggacagtcgtcgtccagcgcccatcacccaccatcgtgtgcgatccctacgcctcgtgtggtccattcggctactgcgacgcaacggcagccatcccgaggtgccaatgcctcgatgggtttgagcctgatggctccaactcttcttcgagaggatgccggaggaagcagcaattgagatgccgaggcagagatgatcgcttcgtgaccatggccggaatgaaggtccctgacaagttcttgcatgtccggaatagaagcttcgatgagtgcgcggccgagtgcagccgcaactgctcgtgcacggcctacgcttacgccaacttgaccggagccgaccaggcaaggtgcttgctttggtcaggggaacttgctgacactgggagggccaacattggtgagaatctgtacctccggttggccgactctactgttaacaagaagaagagtgacatcccgaagatcgtacttccggttataacaagcctgttgatactcatgtgcatatgtcttgcgtggatatgcaaatcaagaggcatacaccgaagcaaggaaattcagaagaaacatagactacaacatttgaaggattccagtgaacttgagaatgacaatctagaacttccatttatttgcttagaagacattgtcactgcaacgaacaatttttctgatcacaacatgcttgggaaaggtggttttggaaaagtttacaagggagtgttggaaggtggcaaggagattgcagtcaaaaggcttagtaagggttctcagcaaggtgtggaggagttcagaaatgaagtagttctgattgccaaattgcagcatagaaatttagttaggcttatcagttattgcattcacgaagatgagaagttactcatctacgaatacttgcctaataaaagcttggatactttcctttttgatgctaaaagaaaatcagttctcgattggacgacccggttcatgataatcaaaggtatagcgagagggcttctttatttgcaccaagattcaaggttaacgataattcacagggatctcaaagcaagcaacatcttgttggacacaaatatgagtcccaaaatatcagattttgggatggcaaggatctttgaaggaaataagcaacaagaaaatactaccagagtagttgggacatacggttacatgtctcctgaatatgctttggaaggctccttttctgtcaagtctgacacctacagttttggggtgctactgttggagcttgtaagtggcttaaagatcagttcgccccatctcataatggatttccaaaatcttataaccttcgcgtggagtttatggaaagatggaaatgcaatggatttggtggactcatcaattcgggagagttgtctacttcacgaagttttacgatgtattcaaatagcactttcatgtgttcaagatgacccaactgccaggccactcatgtcatccattgtgttcatgttagagaacgagacagctgctcttcctaccccaaaggagtctgcttatttgacagctagggtctatggaactaaagacactagagaaaacaaggaaagatctgtaaataacgtgagtatcacagcactagagggacgttaa</cdnaseq>

Protein Sequence

<aaseq>MACLPVFISLLFLISSCKGDDQLTQANRLISPGDVLISKGRVFA LGFFSPTASNQSFFLGIWYHNISESERTYVWVANRDNPITTPSFATLAISNSSNLVLS DSGNHTLWTTNVTATGGDGAYAALLDSGNLVLRLPNGTTIWQSFDHPTDTLLMGMRFL VSYKAQVAMRCIAWKGPDDPSTGDFSISGDPSSNLQIFLWNGTRPYIRFIGFGPSSMW SSVFSFSTSLIYETSVSTDDEFYIIYTTSDGSPYKRLQLDYTGTLKFLAWNDSASSWT VVVQRPSPTIVCDPYASCGPFGYCDATAAIPRCQCLDGFEPDGSNSSSRGCRRKQQLR CRGRDDRFVTMAGMKVPDKFLHVRNRSFDECAAECSRNCSCTAYAYANLTGADQARCL LWSGELADTGRANIGENLYLRLADSTVNKKKSDIPKIVLPVITSLLILMCICLAWICK SRGIHRSKEIQKKHRLQHLKDSSELENDNLELPFICLEDIVTATNNFSDHNMLGKGGF GKVYKGVLEGGKEIAVKRLSKGSQQGVEEFRNEVVLIAKLQHRNLVRLISYCIHEDEK LLIYEYLPNKSLDTFLFDAKRKSVLDWTTRFMIIKGIARGLLYLHQDSRLTIIHRDLK ASNILLDTNMSPKISDFGMARIFEGNKQQENTTRVVGTYGYMSPEYALEGSFSVKSDT YSFGVLLLELVSGLKISSPHLIMDFQNLITFAWSLWKDGNAMDLVDSSIRESCLLHEV LRCIQIALSCVQDDPTARPLMSSIVFMLENETAALPTPKESAYLTARVYGTKDTRENK ERSVNNVSITALEGR</aaseq>

Gene Sequence

<dnaseqindica>2917..3219#2680..2830#2351..2588#2040..2250#1774..1955#1595..1696#19..1273#tatgagatttaccagattatggcctgcctcccagttttcatctccttgctgttcctcatctcttcctgcaaaggcgatgaccagctcacacaggcaaatcgactgatctcccccggcgacgtactcatctccaaaggcagggtcttcgcgctcggcttcttctccccaacagcctccaaccagagcttcttcctcggcatatggtaccacaacatctccgagtccgagcgcacgtacgtttgggtcgccaaccgcgacaacccaatcaccaccccttcattcgcaacgctcgccatcagcaacagctctaaccttgtcctgtcggattccggcaatcacaccctttggacgacgaacgtcacggccaccggaggcgacggagcttacgcggcgctgctcgactcggggaacttggttctccggttgccgaatggtacaaccatatggcagagctttgatcacccaactgacacccttctgatgggcatgaggtttttggtgagctacaaggcacaagtcgccatgcggtgcatcgcttggaagggcccagatgacccctccaccggagacttctccatcagcggtgatcccagctcaaaccttcagatcttcctttggaacggtaccagaccatatatccgctttattggatttgggcctagcagcatgtggtcttcggtcttctcattcagtacctctctcatctacgaaacatcggtgagcacggatgatgagttctacatcatatacacaacctctgatggctcaccttacaagcgtcttcaactggactacacgggtaccttgaagttcctggcttggaacgacagcgcgtcgtcatggacagtcgtcgtccagcgcccatcacccaccatcgtgtgcgatccctacgcctcgtgtggtccattcggctactgcgacgcaacggcagccatcccgaggtgccaatgcctcgatgggtttgagcctgatggctccaactcttcttcgagaggatgccggaggaagcagcaattgagatgccgaggcagagatgatcgcttcgtgaccatggccggaatgaaggtccctgacaagttcttgcatgtccggaatagaagcttcgatgagtgcgcggccgagtgcagccgcaactgctcgtgcacggcctacgcttacgccaacttgaccggagccgaccaggcaaggtgcttgctttggtcaggggaacttgctgacactgggagggccaacattggtgagaatctgtacctccggttggccgactctactggtatgcccaatttctcttgccctgcggtgaaaataaagctcttaattagatagcctgctcatcgaattaaaagcaacatccatatatacacttgcaaggcatggtatagaatttctgaagaactgaatatgcagaggtcttgccaggccaagattttccacgaacaaaaaaatgttcactacttgataggactcttctgaagaaaacaaaaaaggaatatataccttctgttaaaggaaaaagaacatatatccaatgtgctactccatatcaacctcaaattttataatccgtgttctcttggtgggccgtattctgcagttaacaagaagaagagtgacatcccgaagatcgtacttccggttataacaagcctgttgatactcatgtgcatatgtcttgcgtggatatgcaaatcaagaggtaggccaacaccaactaagcttttcaggctgcattgtttctaaggtaacaatttatatgaaaggctttcctgccaggcatacaccgaagcaaggaaattcagaagaaacatagactacaacatttgaaggattccagtgaacttgagaatgacaatctagaacttccatttatttgcttagaagacattgtcactgcaacgaacaatttttctgatcacaacatgcttgggaaaggtggttttggaaaagtttacaaggtacaaaaggttttaccttggcaatttcagaagaaatatcttttatattctcttgttcaattgaaagagtgtgtgcttgtgcagggagtgttggaaggtggcaaggagattgcagtcaaaaggcttagtaagggttctcagcaaggtgtggaggagttcagaaatgaagtagttctgattgccaaattgcagcatagaaatttagttaggcttatcagttattgcattcacgaagatgagaagttactcatctacgaatacttgcctaataaaagcttggatactttcctttttggtacgttgttactcacttatttgtggtcgtataatacaaacattcttgaggatattcatggttaatgacaattaactttgtttcacattaatcttggaagatgctaaaagaaaatcagttctcgattggacgacccggttcatgataatcaaaggtatagcgagagggcttctttatttgcaccaagattcaaggttaacgataattcacagggatctcaaagcaagcaacatcttgttggacacaaatatgagtcccaaaatatcagattttgggatggcaaggatctttgaaggaaataagcaacaagaaaatactaccagagtagttgggacatagtaagtaacctgtagaccacctaatgatatatgttttcattataactaattcaaactgcacattacattgtttttggaatgatctaaacagcggttacatgtctcctgaatatgctttggaaggctccttttctgtcaagtctgacacctacagttttggggtgctactgttggagcttgtaagtggcttaaagatcagttcgccccatctcataatggatttccaaaatcttataaccttcgtaagtggactgcaatcctcaacattttaatcagtaaaacattgcaaaataaattgaccacaactttcttgtatatcttggttcaggcgtggagtttatggaaagatggaaatgcaatggatttggtggactcatcaattcgggagagttgtctacttcacgaagttttacgatgtattcaaatagcactttcatgtgttcaagatgacccaactgccaggccactcatgtcatccattgtgttcatgttagagaacgagacagctgctcttcctaccccaaaggagtctgcttatttgacagctagggtctatggaactaaagacactagagaaaacaaggaaagatctgtaaataacgtgagtatcacagcactagagggacgttaaatgtttattacaccattccctgtttagtctataaacttctgtagcttgtagttgtacacttatacattagcaattcaaatttatacacagaaaatgttctgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0632100, RefSeq:Os04g0632100