Os04g0647900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0647900 |
|---|---|
| Description |
Leucine rich repeat, N-terminal domain containing protein |
| Version |
NM_001060607.1 GI:115460943 GeneID:4337207 |
| Length |
3422 bp |
| Definition |
Oryza sativa Japonica Group Os04g0647900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:33362114..33365535 |
| Sequence Coding Region |
33362153..33362567,33362651..33362803,33362923..33363138,33363237..33365332 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:33362114..33365535 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:33362114..33365535 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagcgcaggagaagacggagtttatttcaggatgagattcttcttcttcttcttcttggttgtgctatgcttgctagattccaatatctccacgtcccatggctgcttcgtggaggagaggacggcgctgatggacattggctcctctctgacgcgctcaaacggcacggtgccgccatcatgggggcgcggcgacggtgacgacgactgctgcttgtgggagcgcgtcaaatgcagcaacatcactgggcgagtatcacatctctacttctcaaacctgtatgattctctggaagtgctaaatgcacatggtgactcgttttggcgtttcaacacgacggtcttctcctcattcccggagcttcagttcctggatctgtccagtatctatcccagttctctaaatatcgatggcttggtagggctgaagctgcccaagctacagcatctcaacctcagttataactggttgcaagagagtatcctcgcagatcttggggaactggtttcgcttgaagtcctagatgccagctccaacgccatgagtggagttgttcccactgcagttttaaaaaatcttacgaatctgaaggagctgaatttgagtgccaacggattcagcggaagccttccggggtcattacttgaactacctcaccttgatccctcaggaagttcgttagcaggacgtactccaattaattcatctttggagccagtttcactacaagtattaaatctcaacaacaacaggatgagtggagctcttccaaccgaacgagcattcggatatctaaggaacctacgagaattgcatttgagttccaataacttcactggaaacatttctactttcttgctttcacttccacatattgaacgattggatctctcgggaaatacttttgaaggacctatccctataactccatcttcaaatctttctctgtctctcaaaggtcttcggttttcccagaacaatctgagtggtaaactctcatttttttggctgaggaacctcactaaacttgaagaaatcaacttgtcagggaatattaatttagcagttgatgtcaatattcctggatgggcacctccattccaactgaaacagttagctctctctggttgtggtcttgacaaaggcataattgcagaaccacactttctacgcacacaacatcatttgcaggagcttgacttgtcaaacaataacttgtcaggaagaatgccgaattggctttttacaaaagaagcaactctggttaacctaaaccttggaaataactcgctaactggatctctaagtcccatatggcacccccaaacagctctacaatctattgttatatctaccaaccgtattacagggaagctacctgccaacttcagcgcaatatttccaagcttgtccactctggatttgtcagacaataactttcatggagaaattccgatgtcactgtgcagcatcaaacacatgaaggacttgagcttatcaaacaataatttttctggtaaaatgccgacttgtgtgttcactgattttcttgagctgtggaccttgagtgcctcaaacaaccagcttggaggtctggtgtttggtgggatgaaaaaactgtccatcgggtttgcaatgcacctacagaacaacaaatttgaaggaacactgcctcgtaatctgtcaggagcactagtaatcatggatttgcatgataacagcctgtccggtgaacttgacacctcattttggaatctgtctaaattgcaggtactagatctttctgggaaccatataactggcagtatccctcaaaaaatttgcagcttggcaagcattgaaattttagatctttcaaacaacaacttatcaggatctataccaagatgtgccagtgcatctctaagttcgcttaatctgtatgggaattcattatcaggaaacatctcggatgatcttttcaacacatcaaatcttatgtatttggatatgagacataataagttgactggtaacctcaattggttacggcatcttgataaaatcaagacactttcattgggatggaatgactttgaaggccaaatcactccaaacttgtgtaaactaaagtgcccaaggataatcgacttctcacacaacaaactctcaggctcactgccaccatgtgttggcaacatctcttgtgagagtgatacggcagctcaaaattattcaccattgctacttatttatgttataatagaggcttacataattgttcatgacccaatagacttcacctttgctacaaaagggggacaatatacatatggttacaacttcttcgatctgatgtctggtatcgacttatccgggaatatgctgtcaggagaaattccatgggagcttgggaatctgagccatatcaaatccctcaacctgtccaacaatttcttcactggtcaaatcccagcaagctttgcaaacatgagcgagattgaaagcttggacctttcccacaatgaactgagtggattgattccatggcagctgaccaaattatcgtcattagcggtgttctctgtggcatataacaacttatcaggatgtattccaaactctggtcagttcggcacgtacggtatggatagctaccaaggcaacagtaatcttcggagtatgtcaaagggaaacatatgctctccagattcaggagcaggtgacttgccatcggaaggaagagacagtatggcagatgatccagtgctctatgcagtcagtgctgcctcattcgtcctggcgttttggggcaccgttgctttcttgtttttccatccactcggacggcgtgcaattctcgcgacaaggaatttggtgttttggtgtggtcattaa</cdnaseq> |
| Protein Sequence |
<aaseq>MSAGEDGVYFRMRFFFFFFLVVLCLLDSNISTSHGCFVEERTAL MDIGSSLTRSNGTVPPSWGRGDGDDDCCLWERVKCSNITGRVSHLYFSNLYDSLEVLN AHGDSFWRFNTTVFSSFPELQFLDLSSIYPSSLNIDGLVGLKLPKLQHLNLSYNWLQE SILADLGELVSLEVLDASSNAMSGVVPTAVLKNLTNLKELNLSANGFSGSLPGSLLEL PHLDPSGSSLAGRTPINSSLEPVSLQVLNLNNNRMSGALPTERAFGYLRNLRELHLSS NNFTGNISTFLLSLPHIERLDLSGNTFEGPIPITPSSNLSLSLKGLRFSQNNLSGKLS FFWLRNLTKLEEINLSGNINLAVDVNIPGWAPPFQLKQLALSGCGLDKGIIAEPHFLR TQHHLQELDLSNNNLSGRMPNWLFTKEATLVNLNLGNNSLTGSLSPIWHPQTALQSIV ISTNRITGKLPANFSAIFPSLSTLDLSDNNFHGEIPMSLCSIKHMKDLSLSNNNFSGK MPTCVFTDFLELWTLSASNNQLGGLVFGGMKKLSIGFAMHLQNNKFEGTLPRNLSGAL VIMDLHDNSLSGELDTSFWNLSKLQVLDLSGNHITGSIPQKICSLASIEILDLSNNNL SGSIPRCASASLSSLNLYGNSLSGNISDDLFNTSNLMYLDMRHNKLTGNLNWLRHLDK IKTLSLGWNDFEGQITPNLCKLKCPRIIDFSHNKLSGSLPPCVGNISCESDTAAQNYS PLLLIYVIIEAYIIVHDPIDFTFATKGGQYTYGYNFFDLMSGIDLSGNMLSGEIPWEL GNLSHIKSLNLSNNFFTGQIPASFANMSEIESLDLSHNELSGLIPWQLTKLSSLAVFS VAYNNLSGCIPNSGQFGTYGMDSYQGNSNLRSMSKGNICSPDSGAGDLPSEGRDSMAD DPVLYAVSAASFVLAFWGTVAFLFFHPLGRRAILATRNLVFWCGH</aaseq> |
| Gene Sequence |
<dnaseqindica>40..454#538..690#810..1025#1124..3219#actgatcgatcatcctcaggtgtctccagcctgctagagatgagcgcaggagaagacggagtttatttcaggatgagattcttcttcttcttcttcttggttgtgctatgcttgctagattccaatatctccacgtcccatggctgcttcgtggaggagaggacggcgctgatggacattggctcctctctgacgcgctcaaacggcacggtgccgccatcatgggggcgcggcgacggtgacgacgactgctgcttgtgggagcgcgtcaaatgcagcaacatcactgggcgagtatcacatctctacttctcaaacctgtatgattctctggaagtgctaaatgcacatggtgactcgttttggcgtttcaacacgacggtcttctcctcattcccggagcttcagttcctggatctgtccagtatctatcccagttctctaaatatcgatggtatgtgcacagtgtccatcctgaataaccaagattgctccttgcttttgcaatgactaatattttcagacaaactatcataggcttggtagggctgaagctgcccaagctacagcatctcaacctcagttataactggttgcaagagagtatcctcgcagatcttggggaactggtttcgcttgaagtcctagatgccagctccaacgccatgagtggagttgttcccactgcaggtacagaaatggatatttagaatgaacatagttcagtaaagaattagcatcttgtacatgtgatgattatatttgtaacatcttgtacatgtgctgttatatttgtaacactattgcagttttaaaaaatcttacgaatctgaaggagctgaatttgagtgccaacggattcagcggaagccttccggggtcattacttgaactacctcaccttgatccctcaggaagttcgttagcaggacgtactccaattaattcatctttggagccagtttcactacaagtattaaatctcaacaacaacaggatgagtggagctcttccaaccgaacgaggtaaaaataatggacatttcatgcttgatcataacatctgggcaagattttctatgatgctgattataactgattcattgtattcatactttgcgcagcattcggatatctaaggaacctacgagaattgcatttgagttccaataacttcactggaaacatttctactttcttgctttcacttccacatattgaacgattggatctctcgggaaatacttttgaaggacctatccctataactccatcttcaaatctttctctgtctctcaaaggtcttcggttttcccagaacaatctgagtggtaaactctcatttttttggctgaggaacctcactaaacttgaagaaatcaacttgtcagggaatattaatttagcagttgatgtcaatattcctggatgggcacctccattccaactgaaacagttagctctctctggttgtggtcttgacaaaggcataattgcagaaccacactttctacgcacacaacatcatttgcaggagcttgacttgtcaaacaataacttgtcaggaagaatgccgaattggctttttacaaaagaagcaactctggttaacctaaaccttggaaataactcgctaactggatctctaagtcccatatggcacccccaaacagctctacaatctattgttatatctaccaaccgtattacagggaagctacctgccaacttcagcgcaatatttccaagcttgtccactctggatttgtcagacaataactttcatggagaaattccgatgtcactgtgcagcatcaaacacatgaaggacttgagcttatcaaacaataatttttctggtaaaatgccgacttgtgtgttcactgattttcttgagctgtggaccttgagtgcctcaaacaaccagcttggaggtctggtgtttggtgggatgaaaaaactgtccatcgggtttgcaatgcacctacagaacaacaaatttgaaggaacactgcctcgtaatctgtcaggagcactagtaatcatggatttgcatgataacagcctgtccggtgaacttgacacctcattttggaatctgtctaaattgcaggtactagatctttctgggaaccatataactggcagtatccctcaaaaaatttgcagcttggcaagcattgaaattttagatctttcaaacaacaacttatcaggatctataccaagatgtgccagtgcatctctaagttcgcttaatctgtatgggaattcattatcaggaaacatctcggatgatcttttcaacacatcaaatcttatgtatttggatatgagacataataagttgactggtaacctcaattggttacggcatcttgataaaatcaagacactttcattgggatggaatgactttgaaggccaaatcactccaaacttgtgtaaactaaagtgcccaaggataatcgacttctcacacaacaaactctcaggctcactgccaccatgtgttggcaacatctcttgtgagagtgatacggcagctcaaaattattcaccattgctacttatttatgttataatagaggcttacataattgttcatgacccaatagacttcacctttgctacaaaagggggacaatatacatatggttacaacttcttcgatctgatgtctggtatcgacttatccgggaatatgctgtcaggagaaattccatgggagcttgggaatctgagccatatcaaatccctcaacctgtccaacaatttcttcactggtcaaatcccagcaagctttgcaaacatgagcgagattgaaagcttggacctttcccacaatgaactgagtggattgattccatggcagctgaccaaattatcgtcattagcggtgttctctgtggcatataacaacttatcaggatgtattccaaactctggtcagttcggcacgtacggtatggatagctaccaaggcaacagtaatcttcggagtatgtcaaagggaaacatatgctctccagattcaggagcaggtgacttgccatcggaaggaagagacagtatggcagatgatccagtgctctatgcagtcagtgctgcctcattcgtcctggcgttttggggcaccgttgctttcttgtttttccatccactcggacggcgtgcaattctcgcgacaaggaatttggtgttttggtgtggtcattaacgatttgaagtttatttttctgtcatccatttctgattgtgaagtctccacttaccaactgcttcaaaattcttgagtctataatttttaatctaatgtccatattttgttttgggcctgtcatctaaatgtcgatgttgtgtaaatggctgttgagaaatgtagcttgctataagatgaatgaatatattaggctgcaattt</dnaseqindica> |
| External Link(s) |
