Os04g0648500
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os04g0648500 |
|---|---|
| Description |
BRCA1-associated 2 domain containing protein |
| Version |
NM_001060610.1 GI:115460949 GeneID:4337211 |
| Length |
5067 bp |
| Definition |
Oryza sativa Japonica Group Os04g0648500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:33393246..33398312 |
| Sequence Coding Region |
33393427..33393588,33393670..33393724,33394039..33394103,33394195..33394338,33394462..33394515 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:33393246..33398312 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:33393246..33398312 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgttcagccttctgatccagtccgtcgacttcaccgacgacgcggccgcggccgcggccaccgccgtcgccgccggcgaaaccagcggcacctctcaccccctctccccgcgctccggcgaccctctccccaccaccacctccgcctccgtaacggcgcctctcgagctgcccggcgcgacctccgcctcgcccgcccgaaaccctaagatcaactacacccgcggcatcctacacctctaccgctcctcctcctcctcctcgtcgaccgcctcctacgcttccgccgtcgccgccactccatcctcctcctcctccggacccgccgccccgcagctcgcctccgactgcctactcccgccatggcgcggcacacggctcctggtgctcgccgtcccaacccacgtctcaccagacgacttcgtccgcttctgcggcccttacatcgagcacgcctccgatatccatgtcgtcagggatgatggggtggaggaccggtatagcgtgctcgtggagtttgaggatcagaagagtgccgatgggttctacttggacctcaacggttggaggttctcgtcatccgaggtagaggtttgccatgttctgtttatagttgctgtccaatatacaccatcaaccaagcctgcggtgactccaccagttggatccactgagctcccaacatgtcctgtctgtattgaaagattggatcaagacatcagcggaattatggcaacgacttgtgatcattcgttccagtgttcatgtgtttcaatgtgggtcaattcatcttgtccggtttgccagttttgtcagaagcagtctaagaatcctacatgttctgtttgtcaaacctctggaaacctatggatctgtataatatgtggttttgttggatgtgggaggtatgaagaaggccatgcaattaggcactggaaagaaactcagcactgctattcacttgatttggaaactcaacgtgtttgggattatgttggtgacagttacgtccaccgacttaatcactccaaaagtgatgtgaagcattccaagttcaagtcaaagtgtaaatattctggtgacaaatgtgcaaactgctcctgcaatgatgaggaagatatcggtggtgctattttcagcagcaaagcagaaacaattgtggatgaatacaaccgtcttcttgctagccaacttgaaactcagagagagtattatgaggctcggctgtcagaagctaagaaagaaaaggaacaacacatttctgatgcagtggataaagctgtaaatgataagagtaaagaaatccaacaaaagattgagaatgcaatgttggagaaaaagaaacttgcagatatgaatgaaaaactcacgaagaaccaggatatatggcgtcgaacactaaaagaaattgaggaaagggagagggctcaactgaagttgaaagatgatacaattcgtgatctagaagaacagataaaagatttcaaattttccatcaagttacagaaatcgatcgagaagaataaaaatgctgatgatctcaaaggaggtttgctggtgccactcccaatggtgccagattctggaaccaaaggtaaaagatcgtcaagaacaagcaagaggaggaaccagtag</cdnaseq> |
| Protein Sequence |
<aaseq>MFSLLIQSVDFTDDAAAAAATAVAAGETSGTSHPLSPRSGDPLP TTTSASVTAPLELPGATSASPARNPKINYTRGILHLYRSSSSSSSTASYASAVAATPS SSSSGPAAPQLASDCLLPPWRGTRLLVLAVPTHVSPDDFVRFCGPYIEHASDIHVVRD DGVEDRYSVLVEFEDQKSADGFYLDLNGWRFSSSEVEVCHVLFIVAVQYTPSTKPAVT PPVGSTELPTCPVCIERLDQDISGIMATTCDHSFQCSCVSMWVNSSCPVCQFCQKQSK NPTCSVCQTSGNLWICIICGFVGCGRYEEGHAIRHWKETQHCYSLDLETQRVWDYVGD SYVHRLNHSKSDVKHSKFKSKCKYSGDKCANCSCNDEEDIGGAIFSSKAETIVDEYNR LLASQLETQREYYEARLSEAKKEKEQHISDAVDKAVNDKSKEIQQKIENAMLEKKKLA DMNEKLTKNQDIWRRTLKEIEERERAQLKLKDDTIRDLEEQIKDFKFSIKLQKSIEKN KNADDLKGGLLVPLPMVPDSGTKGKRSSRTSKRRNQ</aaseq> |
| Gene Sequence |
<dnaseqindica>4725..4886#4589..4643#4210..4274#3975..4118#3798..3851#3456..3705#3230..3336#1849..1946#880..994#671..779#473..588#29..388#aacggcccaaaaagcccaggaagcaaacatgttcagccttctgatccagtccgtcgacttcaccgacgacgcggccgcggccgcggccaccgccgtcgccgccggcgaaaccagcggcacctctcaccccctctccccgcgctccggcgaccctctccccaccaccacctccgcctccgtaacggcgcctctcgagctgcccggcgcgacctccgcctcgcccgcccgaaaccctaagatcaactacacccgcggcatcctacacctctaccgctcctcctcctcctcctcgtcgaccgcctcctacgcttccgccgtcgccgccactccatcctcctcctcctccggacccgccgccccgcagctcgcctccgactgcctactcccggtaacctctcttccttggtaccatcttatttactaatttgttcatttccgcgtgttctcatgcctcatcgcctgcgtatctcagccatggcgcggcacacggctcctggtgctcgccgtcccaacccacgtctcaccagacgacttcgtccgcttctgcggcccttacatcgagcacgcctccgatatccatgtcgtcaggtgaattatccttctcgttgaagcaatttgtgtccgactttgcccgggaagctatggttttacatatgtgttgtgtcggtagggatgatggggtggaggaccggtatagcgtgctcgtggagtttgaggatcagaagagtgccgatgggttctacttggacctcaacggttggaggttctcgtcatccgaggttactaacattgtcgattggatgtatgtctagtttgctgatcatgtgtaacattgctcctaaattgggaagctcgctcgcttcttgttccatggtgtaggtagaggtttgccatgttctgtttatagttgctgtccaatatacaccatcaaccaagcctgcggtgactccaccagttggatccactgagctcccaacatgtcctgtctgtattggtgagcttatttatatttttctccttgttttgtggtcattcaacaatgtcagatatgaattttgtccactacaattttgcttcgtatcacctccccataggctgggaagatatcaatttgcaatgccccctctgatcaaaagattagccacttctcttctgagaaactacacctgtgaagttgagacttgagaagctacatactcaccacatgtttgtggtgtcttaggggctgtttggttgagtgccaacatttgccaaagttgtggcacccaagtttgaccaattaagcctagtgtttggttcatgccacaagtgagttatgccacaattttttagcaagttggctcacttgtcactgagttatttttttgccataacttgccacaattgtggccaacaaattcttagccatacaatgtgtggcatgccacactttgccaaatattttgtggtaaactatggaagtcatccacactttgccaaatatttcaccatatatatgttaaccttatttttggaggtatacattgcctatcgatttcggtactgttttttttctttctttctaaaagctgactttggggtgctatttttccaagctactactataccagtaagctctgtcaaatctagggaccatgttatttctccttgggcaatatggattacataattatagttaagacctttgttttcaggtctatctattaacttatgttgtttaactatctttgtgcaagtatgcataggtacacacttcctctgtttattgggaagagtttttctgaacattttaatgtatcattttttttctcatcttttcaccatcttcttatgcatgttatgaaacagaaagattggatcaagacatcagcggaattatggcaacgacttgtgatcattcgttccagtgttcatgtgtttcaatgtgggtcaattcatcttgtccggtaatgatcattttgacaatcaccatttctcaattagggcaacaaacaaccatttgttatggctgtgattcttttcctgcttacatttttacatgatactgaatttgcctcaattttatataaatttatgagtcaatccattctatgccattgacaaagcgtgggttctacaatatgccaccgacaaggctcagttctacaatataccattgaacaacttgttttcttccttatctgccattagtcaaccattagtcagatgcagctaagggaggaaaaatgaccaatgccatgttgcattaaataatcttggaagataaaaacacaatggattcctatttttcatcaatgagaaaaaatagtggatcatgaccaacgaaatccatgagcacacatgataccctaggggtaaaatggatatattctcgcccttagagcaggtacaatagcagactataagccagctataaacaatagcagtgcggactctaagacgtaatgtgtgtatgacaggtggggatcaggtattaatagtgtagtaagcaactattgtatgaattagctattacattggctatagatgatttggagctagtagttggctatactattaaacttgctcttaacatagtttgactaatggttgactagcggctatggcatataaggaagaaaactaattgctcgatggtatataatagaactgagctttgtgacatattgcagaatctgtgctttgtcaatggcatagaaatatagaatggattatctctaaatttatattcttccaattttgaatttttgagtaatcttctatggcactgattaacgtagtagttcgaattccataccaatacccaatatgtggccatttatcaagtgtgatcgaattccataacaatatccaataaaatatgtggtcatttatcaagtatgatattgtacatttgctactcagtaggaactaaccagggacagaggtcagggtcatttgcagaatgttcaccttctgtatttttcttgaagatcactgaatgtttatggcacctgtttacccgtgtcggtgaatcttaagacatattgcgctaaccagatttatggagcgtagagttgtagatgtgccaatgtctgcctatggctataatacaaatatattattgccaccactcaccactataaccatatgccattgatttccttgtattaagatcctccactgccttttcacattaccaagctttcttgatcatgacttgtttttattcataatatttctgtttcaggtttgccagttttgtcagaagcagtctaagaatcctacatgttctgtttgtcaaacctctggaaacctatggatctgtataatatgtggttttgttggatgtgggaggtatgctactctgctaattgaatttttggagcattttgcgaatctctttgtatttaataatctgaaggaaagaaagttaatggcatgattactgtttgtgaatttctttgttattacaggtatgaagaaggccatgcaattaggcactggaaagaaactcagcactgctattcacttgatttggaaactcaacgtgtttgggattatgttggtgacagttacgtccaccgacttaatcactccaaaagtgatgtgaagcattccaagttcaagtcaaagtgtaaatattctggtgacaaatgtgcaaactgctcctgcaatgatgaggaagatatcggtggtgctattttcagcagcaaagcagaaacagtaattgctttaagattcattcatttcagttaatctttgacacctcattgccagtctggttcctcaaatcacatatgcttttctcataacagattgtggatgaatacaaccgtcttcttgctagccaacttgaaactcagagagaggttcatcccttattagtgcttatcttttgatgtcacaatctgtactaccagagcttgtcatataatttacattacagtttatatctgatatatttatctgcctatgtttccttatattcatagtattatgaggctcggctgtcagaagctaagaaagaaaaggaacaacacatttctgatgcagtggataaagctgtaaatgataagagtaaagaaatccaacaaaagattgagaatgcaatgttggagaaaaagaaacttgcagatgtgagcatctcaaatcatgcacctttcagttattatcaagcatagttgctgtggttctttgacatgacttggtactttgcctttcctgcagatgaatgaaaaactcacgaagaaccaggatatatggcgtcgaacactaaaagaaattgaggaaaggtatgtttgacccttccaccagaaaatggaagtagatggcacagcgaaaggtgttggatcgtgctaatttgtgtgtgttggttgctctttttttttcctttcctttttttttttggggggggggggggtatatctttttcatgtactactttgtaaagaatctgcttgagccttgtccttttctgttaggcaaaaattggttatgtagcacccaaaattctggtttttagatttctagttttgcgttcctatcataaagatacacaactttccctttttctttcctgataaatctacacttctacactcaacagggagagggctcaactgaagttgaaagatgatacaattcgtgatctagaagaacaggtgctaaactctctttcctcttgaaaacactggagcttgtacaaaggccattagttaacatgccttatacaatttctgcagataaaagatttcaaattttccatcaagttacagaaatcgatcgagaagaataaaaatgctgatgatctcaaaggaggtttgctggtgccactcccaatggtgccagattctggaaccaaaggtaaaagatcgtcaagaacaagcaagaggaggaaccagtagctgcatctgttgtacatgtaacaagcaattgcttggctaatctgtgccaaccaggataatatgatacattctgaaaaaaagagagagtgcaatattattctactacagatagctgccttttatggaacagaatattgaacccaaggatagcatagtttaccatttgacattacatacaggg</dnaseqindica> 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