Os04g0650200

From RiceWiki
Revision as of 20:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0650200

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001060623.1 GI:115460975 GeneID:4337224

Length

1946 bp

Definition

Oryza sativa Japonica Group Os04g0650200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:33530840..33532785

Sequence Coding Region

33531106..33531341,33531447..33531723,33531876..33532144,33532294..33532518,33532656..33532716

Expression

GEO Profiles:Os04g0650200

Genome Context

<gbrowseImage1> name=NC_008397:33530840..33532785 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:33530840..33532785 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgaagctctccttgctacttcccgtcacctgcttcatcctcttcgttctgcatgctgttcatgtggaggcgcgtcccgatcctgccgctttcggcgactccgacaacgggttctacacgctgttcgtgttcggcgattcgttcgccgacaccggcaatctccccaagcgccgactgagcgagcagtcgcgcgaatggtactacccctacggccgtgaccgtggcaacaaccgcccaaccggccgcttctccaacgccatggtccagtccgatctcatcgcacggatgctggggcgtcatgaggcgcctccgacgtacaggagggtggacaactacgtgcacccgcacggcatgaacttcgccgccggcggctccggcgtgttcaagctgccgagcggcgcgccgacgctcgacaagcaggtcgaccacttcagggacctggtgcaggacggcaccatcacccgccggaacctccgtaactccatcgccctcgtcgccgtctccggcaacgactacgcccgcctcgccaacgtcaacgacactagcaagatgatcaagtttgtcgatgaggtgacgagcgagatcgcgaagcaggtgcacaggctgaagaacaacggggcgaggaagatcctggtgaacaacctgcaccccgtcggctgcacgccgtgggtaaccaggccgggcaactactccggctgcagctccaccggcaacatgggcgcctacctccacggcagcaacctccaacagaagctctcgcacctcgactacgtccaccatgtcgacctcaacactgccttctccaacatcgtcaatcccgaccaaggttcgaagcacaaggtgtcgagccagttcgagcacaagatgcagccgtgctgcgagagcttggacccgaacggcttctgcgggcagaagggacacgatggcaaggacctgttcagcgtgtgcaacgatccggagaagtacttctactgggacgatgtgcaccccacggaggctggatggaaggccgtcatgcagcagctggaaggtccaatcaagaaattccttcgaatcaactag</cdnaseq>

Protein Sequence

<aaseq>MAAKLSLLLPVTCFILFVLHAVHVEARPDPAAFGDSDNGFYTLF VFGDSFADTGNLPKRRLSEQSREWYYPYGRDRGNNRPTGRFSNAMVQSDLIARMLGRH EAPPTYRRVDNYVHPHGMNFAAGGSGVFKLPSGAPTLDKQVDHFRDLVQDGTITRRNL RNSIALVAVSGNDYARLANVNDTSKMIKFVDEVTSEIAKQVHRLKNNGARKILVNNLH PVGCTPWVTRPGNYSGCSSTGNMGAYLHGSNLQQKLSHLDYVHHVDLNTAFSNIVNPD QGSKHKVSSQFEHKMQPCCESLDPNGFCGQKGHDGKDLFSVCNDPEKYFYWDDVHPTE AGWKAVMQQLEGPIKKFLRIN</aaseq>

Gene Sequence

<dnaseqindica>1445..1680#1063..1339#642..910#268..492#70..130#aaagccacaagcaattcaacgagttacaccttccaccgtcaaccgaggagctttcagttgttgccggccatggcggcgaagctctccttgctacttcccgtcacctgcttcatcctcttcgttctgcatggtacgtgccatctgcagcgccttcattcttgttcttgattatgtgttcaattatcaatttaatattaattgatcaaatcaaatattcatttctgacgaattaatgagatcgataatgcgtgtgcgtatatataacagctgttcatgtggaggcgcgtcccgatcctgccgctttcggcgactccgacaacgggttctacacgctgttcgtgttcggcgattcgttcgccgacaccggcaatctccccaagcgccgactgagcgagcagtcgcgcgaatggtactacccctacggccgtgaccgtggcaacaaccgcccaaccggccgcttctccaacgccatggtccagtccgatctcatcggtaattaactaactaactataacctaattatccattttcagattgaataatctatcttgaaggaaattttcaacagcatccattttcagattcaatctcagattgaaaatgttactgcgtacttaataatttggctgtacattttgcagcacggatgctggggcgtcatgaggcgcctccgacgtacaggagggtggacaactacgtgcacccgcacggcatgaacttcgccgccggcggctccggcgtgttcaagctgccgagcggcgcgccgacgctcgacaagcaggtcgaccacttcagggacctggtgcaggacggcaccatcacccgccggaacctccgtaactccatcgccctcgtcgccgtctccggcaacgactacgcccgcctcgccaacgtcaacgacactagcaaggtcagtacacagatcggggaaaatgattctcgtttcgtgcatgctacctaaatagtcatctaaatcagccttcacacacattagctactggagtacgtcctagttaacagtctttctgatcgatcgatattgcatgttctttgtgtttgcagatgatcaagtttgtcgatgaggtgacgagcgagatcgcgaagcaggtgcacaggctgaagaacaacggggcgaggaagatcctggtgaacaacctgcaccccgtcggctgcacgccgtgggtaaccaggccgggcaactactccggctgcagctccaccggcaacatgggcgcctacctccacggcagcaacctccaacagaagctctcgcacctcgactacgtccaccatgtcgacctcaacactgccttctccaacatcgtcaatcccgaccaaggtaatatataattactacgcattgttgattcgtcttaatttcttgatgaactttcatttttctgtttacaacgtacatgtgtccattgacgaatttgatatgtaggttcgaagcacaaggtgtcgagccagttcgagcacaagatgcagccgtgctgcgagagcttggacccgaacggcttctgcgggcagaagggacacgatggcaaggacctgttcagcgtgtgcaacgatccggagaagtacttctactgggacgatgtgcaccccacggaggctggatggaaggccgtcatgcagcagctggaaggtccaatcaagaaattccttcgaatcaactagaaattgagatgggcgttaattaggtttagagtgttttggtttagggttaattttttactatcagtttgtgagagttagttatatatgttagtaaattaggtaaagatcccgattggcttgatcggtggatattttgtttagctcgtgttttattgaacatctcgtttcgtcagtcctttgttagtttattattatactagctgggctgggactatatcgaccgaacatgtgaatttggcccacgtatctgatacttctatctgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0650200, RefSeq:Os04g0650200