Os05g0214900

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Revision as of 10:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0214900| Description = Conserved hypothetical protein| Version = NM_001061465.1 GI:115462660 GeneID:4338111| Length = 4001 bp| Definition ...")
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Gene Name

Os05g0214900

Description

Conserved hypothetical protein

Version

NM_001061465.1 GI:115462660 GeneID:4338111

Length

4001 bp

Definition

Oryza sativa Japonica Group Os05g0214900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7105930..7109930

Sequence Coding Region

7106014..7106224,7107896..7108173,7108436..7108660,7109715..7109738

Expression

GEO Profiles:Os05g0214900

Genome Context

<gbrowseImage1> name=NC_008398:7105930..7109930 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7105930..7109930 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccacctcgaggcggtggtggtggtggccgtgggcgacgccgccgcccttctcctcctccgcctcgcggcaccacaagggggaggggtgggggctgggcgggcccgcgctggtgaaggccgtcgggtggctcctcctcgccggcctcctcttccgtgtgctctgctccttcccctcctccacctcttcgccggagatcagcgaagggaaatgtaacctttttgatggtgaatggataccaaatccctctggcccagcctataccaacaaaacttgtcgatttattgatggtcaccagaactgtatgttgaatggtagacctgacatgtcatatttacactggaggtggaaaccatatgagtgtgaactgccacaatttgatgaagtgagatttctaagtgctatgaggaacaaatcctggggtctgattggtgactccattcttcgtaatcaagttcagtcactgctttgccttttgtctaaggctgaagaacctattgaagtgtaccatgacaaggaatacagaaacaggagatggcacttccaatcatacaacttcaccgtgtcactcgtctggagtcccttcctcaccaaatctgaggtatttgaaaatgagaatgggcaatccacctctgaaatccagcttcaccttgacatacttgacccaatctggacaagtcagtatgagaccttcgactatgttgttattgccggtgcattttactcatactga</cdnaseq>

Protein Sequence

<aaseq>MASTSRRWWWWPWATPPPFSSSASRHHKGEGWGLGGPALVKAVG WLLLAGLLFRVLCSFPSSTSSPEISEGKCNLFDGEWIPNPSGPAYTNKTCRFIDGHQN CMLNGRPDMSYLHWRWKPYECELPQFDEVRFLSAMRNKSWGLIGDSILRNQVQSLLCL LSKAEEPIEVYHDKEYRNRRWHFQSYNFTVSLVWSPFLTKSEVFENENGQSTSEIQLH LDILDPIWTSQYETFDYVVIAGAFYSY</aaseq>

Gene Sequence

<dnaseqindica>85..295#1967..2244#2507..2731#3786..3809#actgcaaaatcgccaatcccaaccgcgccactgtcggtgtcggcatcggcgctggaggacctcgagctcgaaatcttgcctcccatggcctccacctcgaggcggtggtggtggtggccgtgggcgacgccgccgcccttctcctcctccgcctcgcggcaccacaagggggaggggtgggggctgggcgggcccgcgctggtgaaggccgtcgggtggctcctcctcgccggcctcctcttccgtgtgctctgctccttcccctcctccacctcttcgccggagatcagcgaaggtgcgagctctctcgtttcctgatcttgaatgcggatgcagtgggaaaggggattgggagggtttaatgctgtcggtgggtttggggggcctgcgagattcggtgcatttcgacatattttgctgttgttggagcgaacattagtggttttcttgggtgttcttcggttccatgcctccacgagttagagattttgatgccacttgaatcttgctgcgggttggaccaaatgattagtctgaatttgttttgttccgttcatcctatctcgtggaatggcgtgcaaattttgttttgctgtgttagtaggaaaacatttcgaattggtgaacgcttttttcttttttgtttctcaaattctgggtagcgctttttccggcgggtttggtggggaaagctccgaataaactttctctgatggagcagtttggcagttacagatctcatgcttgtgcaattgcgattggacttttcttttttcttatcctccaagtggaaatatttaatctcttctctatggaagactagagattcagttctttttattctttaagaaccagaaatctcgaaaacaatatttcctttatatacgtttgcttcgtatggggaagacaaataagaaagctgtctgttttgatcttgtcaaccactgcttagtaaatatctgtgcaaagaatataaatatgcccttcaaatgtagccagtaaattagttcttcagctaaaacatgaaacaaaattaactcttctgttcatctgtcatatgcaaatgttgtctcactacttttagttcctatcctgtacttattcacattatttgatttgttatattgtcctaagtgggcttctgcaattttaaattgtactgtctatttttatgagaatgatactattcgtagtaatcttgaaatttttttagttcttgttgcatattattcccattagaaatcacttggtaggatctcagtaacacgtagaatgcccatccacagtcaaccatgcatttactcacggcatgttgacttttgacatatgtgagtggtaatttgtaaacaattggctgtagcagaatttgcttatcttgacaagctggagcaactaaagtactggtcgttaaggaaggattgtggctatggtgccaagcatgtgttgcttctccaagttttcttttggttgtgactgaatagttaggatgtaatatttatggaaatagttttgatggcaaatttgtatgaatgaacacttgaagcacaaatgacaaacttcttaaactctttcactagttcgaatgggtaaatgagaaaagtggctgatctatatatccacaatttcctgaaacctaaaatgtagtagtattttgtgaacattgtgagtcctcaactattcaagtattcattcacaagttcaagacctgctattgtaccaacctaattcctgtgataaagatctgccttcccacttttgttccaacaacaaacagatattttgttgaactggaaatagttgatgttttatgaatctattactgcttgtgtatctaaaagaagattttagggctactttccaccacagtacgtttaggatacttgacataagaaacaacgtataaattgtgatgtttctttccgtagtgctcttgtcttgcatctcatataggatatttcttttgtagggaaatgtaacctttttgatggtgaatggataccaaatccctctggcccagcctataccaacaaaacttgtcgatttattgatggtcaccagaactgtatgttgaatggtagacctgacatgtcatatttacactggaggtggaaaccatatgagtgtgaactgccacaatttgatgaagtgagatttctaagtgctatgaggaacaaatcctggggtctgattggtgactccattcttcgtaatcaagttcagtcactgctttgccttttgtctaaggtaaaagttatgaacattacatattttcactaattcactttcccaaccctgttatgaagcaatgttcatgctttccttgaataatcatgttcctctgtgcacctttcctaattcttaaatataacttaataagggatgatatatgatagcaagcaagaataccagataagtttcatgttaccttccatgcatactgaacattatccccattagtgttatacagataaccatcctgagcagacctgcttgctgttttatttaggctgaagaacctattgaagtgtaccatgacaaggaatacagaaacaggagatggcacttccaatcatacaacttcaccgtgtcactcgtctggagtcccttcctcaccaaatctgaggtatttgaaaatgagaatgggcaatccacctctgaaatccagcttcaccttgacatacttgacccaatctggacaagtcagtatgagaccttcgactatgttgttattgccggtggacaatggtttctcaaggtcgcggtctactgggagaatgatagggtgataggctgccattactgtcaggacaagaagttacgtgaacttggatttgaacacctctatcgcaggactctgcaacaaatcttcagattcattgcatcttcaaaccacaaaccagctgttctcttcaggacttgggcacccgatcacttcgagaacgcggaatggttcaacgggggaacttgtagccgggttttgccttacaagaagggagagtacagcggaaaagacatggatcgtatcatgagaccaattgaacttgaggagttcaggaatgccatggcggcactaggtggttcgcggaactctgcgaatctgaagctcttggatacctacagcatttcgtccatgagacctgatggccatgttgggccttacaggtatccattcctgaaaggtgacaaggatgccaaatcagttcagaatgattgcctgcattggtgtgtaccaggccctatcgacgcttggaatgatctcgttatgaagatggtattgggctgatgaagcctctgagataatactgaaagagtaaaatgcaccagcggtccttaaacttgtcaagaggtttcacttaggtccacgaacttgcaaagcgcacatcgaggtccctaaacttggtttattatatcatcctggtctaaagccacgtttgaccgtggtcttgtctacgtggcatgccacgtggacgatgacatggattttttgaaattttttctccctccttccttcttttttttctcttttatgaaaagacgatgacatggatgacgtgtacaaggcattttcgtcttttcgacaaggaagaaagagaaaaaaagaattaagaagggagaaaaaaataaaaaaattccatgtcatcatccacatggcgtgccacgtaagcaagatcgcggttaaacgcggctttggaccgggatgatacaataaaccaagtttagggacctcgatgtgcgctttgcaagttcgtggacctaagtgaaacctcctgacaagtttaaggaccgccggtgcattttactcatactgaaaatgcagggtttgtttcaagcacattctgcaaatctcgaatcagggtcagtttcctgtgctcggtcgtgtactggtttaaccgaaatttgtaactagtaaaacctaaattttgtggttgtaaatcatatttcggttttgggccgggaagtggcttattgtttaatgtgtgcggctgtaacttttggaagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0214900, RefSeq:Os05g0214900