Os04g0661300

From RiceWiki
Revision as of 20:01, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0661300

Description

Conserved hypothetical protein

Version

NM_001060683.1 GI:115461095 GeneID:4337287

Length

6515 bp

Definition

Oryza sativa Japonica Group Os04g0661300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34138985..34145499

Sequence Coding Region

34139291..34139338,34139430..34139558,34139643..34139690,34139794..34139856,34139934..34139972
,34141430..34141503,34142196..34142254,34142445..34142504,34142656..34142780
,34143429..34143487,34144154..34144217,34144308..34144361,34144511..34144549
,34145159..34145338

Expression

GEO Profiles:Os04g0661300

Genome Context

<gbrowseImage1> name=NC_008397:34138985..34145499 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34138985..34145499 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgtccgagaggcaggaagcgtgcggcggcggcggcggcggtggcggaggaggactccagcaagccggaggctgcagaggcgaagaagccggccgcgcgggggcgggggaagcgtgccaaggcgtcacccaagcccaagccggagacggagtacttccccgagaagcggaatctggaggatctttggctatcagcatttccggttgggaccgagtgggaaaacattgataagataaaggagttcaactggaactttgaaaatttggagaaagcactagaagaaggaggggagctttatgggaaaacagtttacttgtttggaagcacggagcctcaactattggaggttaatggtgaatcaaagatagtgcttattcctatagttgttgctgttgactgcccttttcctccctcagacaaaattggcataaattctgtccaaagggaaaatgaagagatagtgccaatgaaggccatgaagatggcctgggtgccttatgttccgctggaggatcggcttagtaggattgacagtttgaaaacaaaaatatttactcttggctgcacccagcggaggtctgcgctgaggcacctcaaaactgagagagtcaaattgtttgactactgcatgccatattatatgccactgaaccctcccgaagacgaagatgatacagttgtcaacatcatatatcccctagaacccccgatagtatgtgacttcgactgggagatggatgattacgaggactttgctgatgagaaagttaaagatgaggtgctaccagaggatgagaaagaaaaatttaaggaattcataaaggagagggttagagaaaggaaaagagagctaaaacaggctaaggaagcaagaaagaaagctattgatgatatggaccctaaggtcaaagaggcatttgaaaatatcaaattttacaaattttatcctgtaaaaactccagacacccctgatgtaagcaacgtaaaggcaaagtacatcaatagatattacaggcatgcacatcatctgatgtaa</cdnaseq>

Protein Sequence

<aaseq>MARPRGRKRAAAAAAVAEEDSSKPEAAEAKKPAARGRGKRAKAS PKPKPETEYFPEKRNLEDLWLSAFPVGTEWENIDKIKEFNWNFENLEKALEEGGELYG KTVYLFGSTEPQLLEVNGESKIVLIPIVVAVDCPFPPSDKIGINSVQRENEEIVPMKA MKMAWVPYVPLEDRLSRIDSLKTKIFTLGCTQRRSALRHLKTERVKLFDYCMPYYMPL NPPEDEDDTVVNIIYPLEPPIVCDFDWEMDDYEDFADEKVKDEVLPEDEKEKFKEFIK ERVRERKRELKQAKEARKKAIDDMDPKVKEAFENIKFYKFYPVKTPDTPDVSNVKAKY INRYYRHAHHLM</aaseq>

Gene Sequence

<dnaseqindica>6162..6209#5942..6070#5810..5857#5644..5706#5528..5566#3997..4070#3246..3304#2996..3055#2720..2844#2013..2071#1283..1346#1139..1192#951..989#162..341#agtccccttctccaaccccgcttcaaatttggatcgcgtcgatttcacgcgccgattcccccaaatcgcacacacccccacccctcgaacgcataaatactgatccccaatcgaaacggctgctgaaaccctagccctagcaatcgagagagagggagaagatggcgcgtccgagaggcaggaagcgtgcggcggcggcggcggcggtggcggaggaggactccagcaagccggaggctgcagaggcgaagaagccggccgcgcgggggcgggggaagcgtgccaaggcgtcacccaagcccaagccggagacggagtacttccccgagaagcggaatctggtgaggaggaggcttccccgattacctgtctcggatgcgtgcttcgcttcgcttcgttatgccccgattaggttggggggtttgattggtctggattcgttttggcgttgtggaccgcgtggtgtatttggttgctgcttctgcggcgagattcgtagtggtcggattagtccaaatgatggtaatggtggttgatgttgaaatacgaatggttaatatgtgactggatttggctggactataggggctccccatttcattaggaatagtttttgtgttgaatgttatgttgtagagtttgagccacatctgcgtgggactgaattgtacagtttatgttcttctaagtcagtgttaggaatagtttttttattgtgaagtgctttgctatatgaaacgattacttgaatttgttatcgtgaagtttgagctattattggaacaatgaaaactcacatgggtttatttaagcagttctagggcaattaattgtttggaaatgtgtttgatggatataaaaggaacgtttgagcataatcagtttgtctttgcaaacaggcaaaatgattacttatagttttatggctaatattgtgttactgtgttcaggaggatctttggctatcagcatttccggttgggaccgaggtttgttactttctatgggcctatctatttctttcttttttatttatggctgagtcaattagtgatgcatgttttgacatactttcaactgtgtactatggatatttgctccgctaactattatccatatccgggcctctcatctgcagtgggaaaacattgataagataaaggagttcaactggaactttgaaaatttggaggtacgatgggcagatagtattccaatactactctttttttattatcacacttgctttcagcatgacataaggtttcctgttggtgagcagaaagcactagaagaaggaggggagctttatgggaaaacagtttacttgtttggaagcacggagcgtaagttttcatactcgtgctagttttaaaattaaatctccagttcgtgatacatatattctcctactggcttgctagcatttagtaactgaactaaactgattatattagcttgtttttttgtgtactttatgacatataacttgaaggcctgttttgaatggtttaatttcacagaaatagttattcccacaagaaccatgttatttttcttttttgacgttcctgacaggcctaaatatcaaatctatcagtttgtttgttcccctgaaattcactaattatgactgcagtagcaccctgagaaaattatatatttctctgaacttagatgcacattgttgtagatatacacttgcatgtttttgtcattactgaaagattctctggacatttccaacaatgaaattgtcccctttaggaccatacttctatttatttcttatgctgtttttccatgtcaatgttcgagttgctactgcctttcctaagttgattggtatcagcatttatttgttttaccatgtgcactttagatatgttgggtgttgtcgtggaaaaatgttttcttgtctctgatattttcatttgttcttgggatgtgccagattgtttaataatcatcgatacagtttatctgattaaattgtttttgctgacatgcagctcaactattggaggttaatggtgaatcaaagatagtgcttattcctatagttgttgctgtaagttcgcttccattctcttgatatggaaatttgcatgaggaaacagtccactttagcaaatactcttaaatctgaacatttatctcatgcttatgccaactcaacatcttatcccgtttatgcaccatcgctaacaagttgattttactaaggtgactatgtttgtacttcctacctctgtcatttttgaaagatgccagtacaaacatagtcaccttagtttcataaaagccaatgggactaatttccttggcgctgtttggaagagctagctgcagctagccagccagcagctacaggtgctgcagcctgccagcagtaagcggctgcttcctgcagcagccaaatacgctgtgccgcagggctgggcagggcagcacagcatagcctagaacactgcagtaatggcctacccaatgcccccttttttttttatcacactattttactctggaatttgtttgtttgctctttaaccctaacctctttaaaattgagtatacagtgcaatttggaaaacattgtttggatactttatggttacaacgtcattggcagttgacttgtttatatattactgattttactatttacttgcctcatgttgaatctcatttagcacttgctaccttttctgtgctgcaggttgactgcccttttcctccctcagacaaaattggcataaattctgtccaaagggaaaatgaagagatagtgccaatgaaggccatgaagatggcctgggtgccttatgttccgctggaggatcggtactcccatactattaattctgaacaatatttcttaccatttcttttgagaacctgtatccttaccttgctccctcattaatggcttctgtttttaccaatcatcatatgcagctttgtgttttactcattcttttttgttggtctacaggcttagtaggattgacagtttgaaaacaaaaatatttactcttggctgcacccagcggaggttagtaattcatgctttttccctccttactcgcgattaatgctttatggcatttctggttctattttatttttgtttgtttgttggaacgttatcatccagaagcatgcaacataaattcactgttaacatctttccctagatttttttctgactaattctagagtatcctcatttgtatgttttgcaggtctgcgctgaggcacctcaaaactgagagagtcaaattgtttgactactgcatgccatgtaagctgacttgggattatttctgttggcctgttttgtgtgtacaaatatctgttttcataggattctttgagtgcctgttaacttgagtgtggttccttggcttggtccagtccaattgcaaaatatcctgcaagacatcgatgatgtcttagttaaatggttgcaatgtcagtatgccatgggataagaagctttttactagtcattctttaattcatttccattctgtttctgtatgacaatttgttaatttcattggaatgggtgaacgctagatatatttacatgctattgctgccatgccttttgactttgataagctttttagctggcttatttgcctgcgttggatggttagtacttaattttaatataataatttgatgccatttacatatcctgtgttaacttaggaaggcacttctttccagctatgtaacattgtctgtagtgagccagttttcagtgttgtttgttcctttaatgttagcaattgtggcacaaacataggcacactgtgtaagtcttgttataaagtgtgtgagcatggcgcaaggtcaacaatcatgctcaactggttgatcagatcattttatttacattgttacacttatatgatgcagagtgttttatgaaaatggctgagagtgatgtagtctgcaaatgaatctcgtttaatgttgttgcagattatatgccactgaaccctcccgaagacgaagatgatacagttgtcaacatcatatatcccctagaacccccggtaatcttctcttagtgttttttgttattccagtattgcctaataaattttcctcaacataagctattagtttattttatggaggtatcttattagtgcaaacctaaaatattatgtgtaatgggcaaaactaaaataaatttcttggattgtgatcttaattaggcctatatttgggattcattaagtcagctagtcattttagggaagagcccagatgcagctgtatcttctccactgctataaactgcattgttaacctgggcacctggcctatgtgagaagataaaatttatcgtgtttcactgtttcctgcagctaagaattgatcttctcttatttgtatgcatctctaggctgcttgcatccatgtcatgattgccagttatgaatttgtgttcttttgtctgtggtgcttcatttgccttagcttgtgaggtcaaaaccaacccacatgctgctggttccccttgcctacttctatgaaatcgtgacttttgctgctgtcatttctcgcactagcactcctgcaatgttgtattgttgtcaccctcactattttcagttggatgcttctgaagtttggtgtcttgtgtctgttgagtcaggagatgtgtacttctttatgcttcattaatctgaaaaaatatttcctattttggtttatttatgtgtgcttctagttgcctctgcatgcggactattttcatctttaattgcttctgtgtgctgattgttttcctctacgattgctgctccaggatgattatttcctaactgctgccacatgcttataaattccctcttaattgctgttgcatagacgtactgattgtttccctctaaatcgaataattgctgcttgctgggctggcgttatggcattgcttagtctgtcagcataattgcataggtgtacatgtggtgttttcatgccacctacactcaagtttgaccggtaggcagttgtgcaatcatgtcagtcttgatctttcaggctggtcacttacaggttgttttggtttgaggaatcaccacatgaaaaccatcttggacaggacgatccatcataggatcatcccacaaaatctgaggaatggctccattcctcatccaatagcttagcatttgcttttgaggaatgaggtgatggacaaacccatttcattcctcgaaccaaacaggatcactattgagtcactggatggaagcttagttgcagtgtttatttcctgctattgatacaaacatttcattgttctgaagcgataatgtagcctgagtcacttggttcttagctgatataaacactgaagttattatgttcacgtagatgcctccaatgttgatatttattagatttacttgtattgcttatgttcacctagatgcctccaatgttgataacgtagcagtcatcaaattattttgtattcacattgtactgcttattgcagatagtatgtgacttcgactgggagatggatgattacgaggtttgtactaatttggttgttttgcttgatgcttcctatgaaaggcacctgcattgagtcattctgttgcaatgcaggactttgctgatgagaaagttaaagatgaggtgctaccagaggatgagaaagaaaaatttaaggtgcatcttaattttttgcttaagctgtcagaagaatagtcagtctataataattacctcactgagtactccttcctaactgctgacacatttcttttaacaggaattcataaaggagagggttagagaaaggaaaagagagctaaaacaggtcatagtcaaacgaaatgttaattgccttcaccagatactttaatgcattcaagtactaactgtttctccaaatcttatgcaggctaaggaagcaagaaagaaagctattgatgatatggaccctaaggtcaaagaggcatttgaaaatatcaaattttacaaattttatcctgtaaaaactccagacacccctgatgtaagcaacgtaaaggtatgtgacattgcagctcaggtgtatcttggaacagttgattatgcatatagttgtcttggctttaactcctgtatctactgtattgcaggcaaagtacatcaatagatattacaggcatgcacatcatctgatgtaattgcatcctatcttgaaatgagctatccaacttggagagctgacaccgaaattttgaaagccgtgggagagattcctggcgacatcttcaaattgggtctcttatagacccggggtgaaaacttgttgcaccttaactctgtactgcagttttcgtcagatcctgccattccttagagtatcgcttccttcggcattcttttttgttgtgcgtcgtgtaacattctgggaatagattatgtaaccatcaggccgtacatcttgtaagagcaaaacaattggtttaggaaaaatgctgattcctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0661300, RefSeq:Os04g0661300