Os05g0217800

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Revision as of 10:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0217800| Description = BURP domain containing protein| Version = NM_001061473.1 GI:115462676 GeneID:4338119| Length = 1736 bp| Definition ...")
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Gene Name

Os05g0217800

Description

BURP domain containing protein

Version

NM_001061473.1 GI:115462676 GeneID:4338119

Length

1736 bp

Definition

Oryza sativa Japonica Group Os05g0217800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7237571..7239306

Sequence Coding Region

7237639..7237674,7238200..7239027

Expression

GEO Profiles:Os05g0217800

Genome Context

<gbrowseImage1> name=NC_008398:7237571..7239306 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7237571..7239306 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaggtctctcgctgctctccttctccttctggtcgcagccgcgggagccagccatgccgcgtcgccggcggagatgtactggaagatcgcgctcccgacctcgccgatgcccggcgccattcgcgacctcatcagcccggcgagctcagcggcctcagcttcgaaggataaggaggatacggtgggctccgtgttcttcctcgagaaggacctcttcccgggctccaagatgacgctccacttcacccgcgccaccgccggcgccgcgctgctccctcgcggccgcgccgactccgtcccgttcgcctccgaaaagctcccggagatcctctcccagctctccatccccgccggctcgccgaccgccgacgccatgcggtccacgctcgccgtgtgcgaggccgcgcggatcgccagcgagacggcgcccaagcacaagcactactgcgccacgtcgctcgagtccatggtcgagctcgtcgcctccagcctcggcacccgcgacgtccacgccgtgtccacggaggtggtcaacagggccgggccgacgccgaggcaggcgtacagggtggaggccgtgaggcccgtgccggtgcccgggggcgacatggtggcatgccacaggatgccctacgcgtacgccgtgttcggggtgcacgggatcaagggcgcggcgtacacggtgacgctggccggcgccgacgggaccatggcggaggcggtggcggcgtgccacggggacgtggacgggcacggcgtggcggtggcggaggcgtacaagaggctcggcgtggcgcccgggaaggtggcagtctgccacttcctgcctcaggacgacatgctctgggtgcgcaactga</cdnaseq>

Protein Sequence

<aaseq>MARSLAALLLLLVAAAGASHAASPAEMYWKIALPTSPMPGAIRD LISPASSAASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVP FASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVE LVASSLGTRDVHAVSTEVVNRAGPTPRQAYRVEAVRPVPVPGGDMVACHRMPYAYAVF GVHGIKGAAYTVTLAGADGTMAEAVAACHGDVDGHGVAVAEAYKRLGVAPGKVAVCHF LPQDDMLWVRN</aaseq>

Gene Sequence

<dnaseqindica>69..104#630..1457#gtgctcagtttcactcttatcagtgaattagatcatatacttgtgtccttgacagctcgttaattagcatggctaggtctctcgctgctctccttctccttctggtgagcagacacacatatatatcgctctttgtatggtttagttgttttgagctagaagcctagaacagagataagttgggagagagatatatattatttagagattgaagattaagttaaaattacgtaccctaaccttttttttttgcggggaaccctagctaaaattttaaactaactggatcaacatgtttaccttaagatggttgatggatcaacatatggagttcattgaatttctgatgagaacgtaatacaattagtacttattccagttgcaacttttggctttgatagttttcaattcaactagtttctgacttcaggtatatatatatatatatatctatctatatatatatatatatctatctatatatatatatatatctatatatatatatatatatatctatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatctgaagttaaccgttttaaattcaacttgtttctgactgcatttcaggtcgcagccgcgggagccagccatgccgcgtcgccggcggagatgtactggaagatcgcgctcccgacctcgccgatgcccggcgccattcgcgacctcatcagcccggcgagctcagcggcctcagcttcgaaggataaggaggatacggtgggctccgtgttcttcctcgagaaggacctcttcccgggctccaagatgacgctccacttcacccgcgccaccgccggcgccgcgctgctccctcgcggccgcgccgactccgtcccgttcgcctccgaaaagctcccggagatcctctcccagctctccatccccgccggctcgccgaccgccgacgccatgcggtccacgctcgccgtgtgcgaggccgcgcggatcgccagcgagacggcgcccaagcacaagcactactgcgccacgtcgctcgagtccatggtcgagctcgtcgcctccagcctcggcacccgcgacgtccacgccgtgtccacggaggtggtcaacagggccgggccgacgccgaggcaggcgtacagggtggaggccgtgaggcccgtgccggtgcccgggggcgacatggtggcatgccacaggatgccctacgcgtacgccgtgttcggggtgcacgggatcaagggcgcggcgtacacggtgacgctggccggcgccgacgggaccatggcggaggcggtggcggcgtgccacggggacgtggacgggcacggcgtggcggtggcggaggcgtacaagaggctcggcgtggcgcccgggaaggtggcagtctgccacttcctgcctcaggacgacatgctctgggtgcgcaactgaatgaagcagctacctgcgcgccatccatggctaattaagctccttcctatattttcgatctacctgccggctggctatcatgttatcatcgcgtgtgtgtgcgcgccgatccgacatgcccacactacacgtcgacactacacgtgttttattttgttaattaataagtctggacaaccaggtcatcttgtacggcacttctcccctctgtcccgaaataaaccaacttataaagattgaagtttgtcgcaaaataaatcaacttctaccttcttggct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0217800, RefSeq:Os05g0217800