Os05g0219900

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Revision as of 10:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0219900| Description = C4-dicarboxylate transporter/malic acid transport protein family protein| Version = NM_001061479.1 GI:115462688 GeneI...")
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Gene Name

Os05g0219900

Description

C4-dicarboxylate transporter/malic acid transport protein family protein

Version

NM_001061479.1 GI:115462688 GeneID:4338125

Length

2309 bp

Definition

Oryza sativa Japonica Group Os05g0219900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7389757..7392065

Sequence Coding Region

7389950..7391098,7391191..7391748,7391856..7392017

Expression

GEO Profiles:Os05g0219900

Genome Context

<gbrowseImage1> name=NC_008398:7389757..7392065 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7389757..7392065 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccaacggcggcagcaagcccggtggcgaggtgccgtcgcttctccccgacgttgaggtcaccaacgtcgccagcttcgacgtcacggcgccgagcccgcggtctcagcctagcccgcgccccctgccgcatcccaacacgccgacgcgcccacgggcgccttcgctggtccgcgtgccgcgccgcggcggcgaggcggtggtcccgccgctcgagtcgccggggttccggtcggtgcagcccgtgtccgtcagcctgccggcgtcgccgagcggcttcggcgcgccgactccagtgggcggcggcggcggcggcgactcggacgtcgacctcaggaggcaggccgcggcgaacgcggcgagggagccgctgcactcgccggcgtcgcaggcgaagggcggcggcaatggcgtgcggttcgtccagccggagcggatgatgttcctgtcgcagccgatccccggcgggcagccgtcgcgcaccgcgacgggcggcggcggcggccgcgccatgtgccgggacaagcggtacgactcgttcaagacgtggtccggtaagctggagcggcagctcacccacctcgccggcgtcgggccggaggcccctgtggacaaggaacgcggcgacgccatcggcagccaccacacctcctccttgcccaaggtcgatcgcttcttcgccgccctggagggccccgaactggaccagctcaagtcggaggaggagctggtgctgccgtcggacaagacatggccgttcttgctgcggttcccggtgtcggcgttcggtatgtgcctgggggtgagcagccaggcgatcctgtggaagacgatcgcgacgtcggggccgacggcgttcctgcacgtgaccaccaaggtgaacctggtgctgtggtgcgtgtccgtggcgctcatgtgcgccatctcggcgacgtacggcgccaaggtggtgttcttcttcgaggccgtccggcgcgagtactaccacccgatcagggtcaacttcttcttcgcgccgtggatcgcctgcctcttcctcaccatcggcgtgccggactccgtggcgccgacgctgctgccgcactggctctggtacgcgctcatggcgcccgtgctgtgcctggagctcaagatctatgggcagtggatgtcgggggggcagaggcggctgtccaaggtggcgaacccgtcgaaccacctgtccgtcgtcggcaacttcgtcggcgcgctgctgggcgcgtcgatggggctcagggaggggcccgtgttcttcttcgccgtcgggatggcgcactacagcgtgctgttcgtgacgctgtaccagcggctgccgacgaacgagacgctgcccaaggagctccacccggtgttcttcctgttcgtggcggcgccgagcgtggcgtccatggcgtgggcgaggatcacgggggagttcggcctcggctccagggtcgcctacttcatcgccatgttcctgtacgcgtcgctcgccgtgcggatcaacttcttccgcgggttcaggttctcgctggcgtggtgggcgtacacgttccccatgaccggcgccgccatcgcctccatccgctactccaccgaggtggacaacgcgctcaccagggcgctctgcgtcgcgctctccgccgtcgccacgctcgtcgtcaccgccctcttcgccaccaccatgatccacgccttcgtgctccacaagctcttccccaacgacatcgccatcgccatcaccgacggccagagcatgatccccatcaaggagctgctcgagatgcacgccgacgccgccgacgccgacgccgacgacgaggacattgagtccgccgcggccaagcccaccgcggcgagatcttga</cdnaseq>

Protein Sequence

<aaseq>MEANGGSKPGGEVPSLLPDVEVTNVASFDVTAPSPRSQPSPRPL PHPNTPTRPRAPSLVRVPRRGGEAVVPPLESPGFRSVQPVSVSLPASPSGFGAPTPVG GGGGGDSDVDLRRQAAANAAREPLHSPASQAKGGGNGVRFVQPERMMFLSQPIPGGQP SRTATGGGGGRAMCRDKRYDSFKTWSGKLERQLTHLAGVGPEAPVDKERGDAIGSHHT SSLPKVDRFFAALEGPELDQLKSEEELVLPSDKTWPFLLRFPVSAFGMCLGVSSQAIL WKTIATSGPTAFLHVTTKVNLVLWCVSVALMCAISATYGAKVVFFFEAVRREYYHPIR VNFFFAPWIACLFLTIGVPDSVAPTLLPHWLWYALMAPVLCLELKIYGQWMSGGQRRL SKVANPSNHLSVVGNFVGALLGASMGLREGPVFFFAVGMAHYSVLFVTLYQRLPTNET LPKELHPVFFLFVAAPSVASMAWARITGEFGLGSRVAYFIAMFLYASLAVRINFFRGF RFSLAWWAYTFPMTGAAIASIRYSTEVDNALTRALCVALSAVATLVVTALFATTMIHA FVLHKLFPNDIAIAITDGQSMIPIKELLEMHADAADADADDEDIESAAAKPTAARS</aaseq>

Gene Sequence

<dnaseqindica>968..2116#318..875#49..210#gttacatgtgtgtgtcgtgcaggtagtgagtgagtgagtgagtgagcaatggaggccaacggcggcagcaagcccggtggcgaggtgccgtcgcttctccccgacgttgaggtcaccaacgtcgccagcttcgacgtcacggcgccgagcccgcggtctcagcctagcccgcgccccctgccgcatcccaacacgccgacgcgcccacgggtgagtcgccgtcgccatggattggtttgatctgttctagcttgccatggtgatcgatcgagacatggacgtggaggtcgctgactgtttgttcgttggcaatgcaggcgccttcgctggtccgcgtgccgcgccgcggcggcgaggcggtggtcccgccgctcgagtcgccggggttccggtcggtgcagcccgtgtccgtcagcctgccggcgtcgccgagcggcttcggcgcgccgactccagtgggcggcggcggcggcggcgactcggacgtcgacctcaggaggcaggccgcggcgaacgcggcgagggagccgctgcactcgccggcgtcgcaggcgaagggcggcggcaatggcgtgcggttcgtccagccggagcggatgatgttcctgtcgcagccgatccccggcgggcagccgtcgcgcaccgcgacgggcggcggcggcggccgcgccatgtgccgggacaagcggtacgactcgttcaagacgtggtccggtaagctggagcggcagctcacccacctcgccggcgtcgggccggaggcccctgtggacaaggaacgcggcgacgccatcggcagccaccacacctcctccttgcccaaggtcgatcgcttcttcgccgccctggagggccccgaactggaccagctcaaggtaaggggaaacaaaaaagagaatcaatcgatctcatccatcctccattgttgttgtcacgctgacgtcacccgcaacctccattgccgcagtcggaggaggagctggtgctgccgtcggacaagacatggccgttcttgctgcggttcccggtgtcggcgttcggtatgtgcctgggggtgagcagccaggcgatcctgtggaagacgatcgcgacgtcggggccgacggcgttcctgcacgtgaccaccaaggtgaacctggtgctgtggtgcgtgtccgtggcgctcatgtgcgccatctcggcgacgtacggcgccaaggtggtgttcttcttcgaggccgtccggcgcgagtactaccacccgatcagggtcaacttcttcttcgcgccgtggatcgcctgcctcttcctcaccatcggcgtgccggactccgtggcgccgacgctgctgccgcactggctctggtacgcgctcatggcgcccgtgctgtgcctggagctcaagatctatgggcagtggatgtcgggggggcagaggcggctgtccaaggtggcgaacccgtcgaaccacctgtccgtcgtcggcaacttcgtcggcgcgctgctgggcgcgtcgatggggctcagggaggggcccgtgttcttcttcgccgtcgggatggcgcactacagcgtgctgttcgtgacgctgtaccagcggctgccgacgaacgagacgctgcccaaggagctccacccggtgttcttcctgttcgtggcggcgccgagcgtggcgtccatggcgtgggcgaggatcacgggggagttcggcctcggctccagggtcgcctacttcatcgccatgttcctgtacgcgtcgctcgccgtgcggatcaacttcttccgcgggttcaggttctcgctggcgtggtgggcgtacacgttccccatgaccggcgccgccatcgcctccatccgctactccaccgaggtggacaacgcgctcaccagggcgctctgcgtcgcgctctccgccgtcgccacgctcgtcgtcaccgccctcttcgccaccaccatgatccacgccttcgtgctccacaagctcttccccaacgacatcgccatcgccatcaccgacggccagagcatgatccccatcaaggagctgctcgagatgcacgccgacgccgccgacgccgacgccgacgacgaggacattgagtccgccgcggccaagcccaccgcggcgagatcttgagctggaagatgacacgatcggattcttgaatttctcggcggcattgccagagtgtggccctgatggagtgagttgaggagatgaattcaaagttgaaaccacatgtatcctatgataatcaaagtgtttttcttgaattagggcaacaatgttttgtacatcaggacatatatcctattagattgtgtgttct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0219900, RefSeq:Os05g0219900