Os05g0220100

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Revision as of 10:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0220100| Description = Per1-like family protein| Version = NM_001061480.1 GI:115462690 GeneID:4338126| Length = 4745 bp| Definition = Oryz...")
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Gene Name

Os05g0220100

Description

Per1-like family protein

Version

NM_001061480.1 GI:115462690 GeneID:4338126

Length

4745 bp

Definition

Oryza sativa Japonica Group Os05g0220100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7409613..7414357

Sequence Coding Region

7409978..7410264,7410622..7410809,7410907..7411106,7411197..7411461,7413826..7413935

Expression

GEO Profiles:Os05g0220100

Genome Context

<gbrowseImage1> name=NC_008398:7409613..7414357 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7409613..7414357 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgggtgcggcggcggctgggtggctcggctggctgcgctcctcgtcgtcgggttcgtgctcggctccgtcgacgccagccttggcgatgttgatccgcagtacagaacttgcgtggaggagtgtcatactacagggattattggggagaacatcataagccactgccagtccccagggaatgatgacgcgtctgttggaagttcttggtacacgcaggagcccctatacatgcagtggaagcaactaaactgtatgaatgactgccgttactactgcatgatgcaaagagaaggtgaaaggcaatcacgtggtctgaaccctgttaagtatcatggaaaatggcccttcatacgtgtttctgtcttccaagagccactctcagctgcactgtctgctgtcaacctattgatgcacttcactggctggctttcatttttcctgctggtgaattacaaattacctgttagaccccaaactaagaggacatactacgaatacactggattatggcatatatatgcaatattatcaatgaacgcatggttttggagctctatattccatactagggatatagacttgactgagaagttggattactcttcagctgtggctctacttggctattctttaatcctttcattgttaaggactttcaatgtcaaggacgaggctaccagggtgatgtttgctgctccaattttggcatttgttacaacacacatcttgtatcttaacttctatgagcttgactatgggtggaacatgaaagtttgcgtggtgatggctgtggttcaacttctggcatgggcaatttgggctggcataacccagcatccatcacgattcaagctttgggtggttgtctttggtggtgcacttgctatgcttctcgaagtatacgactttcctccgtacaagggatacgctgatgcacactcgctgtggcatgcaagcaccattcctctcacatatctctggtggagtttcatcaaggatgacgcagaattccgcacatcaactcttattaagaaggcaaagtga</cdnaseq>

Protein Sequence

<aaseq>MAGCGGGWVARLAALLVVGFVLGSVDASLGDVDPQYRTCVEECH TTGIIGENIISHCQSPGNDDASVGSSWYTQEPLYMQWKQLNCMNDCRYYCMMQREGER QSRGLNPVKYHGKWPFIRVSVFQEPLSAALSAVNLLMHFTGWLSFFLLVNYKLPVRPQ TKRTYYEYTGLWHIYAILSMNAWFWSSIFHTRDIDLTEKLDYSSAVALLGYSLILSLL RTFNVKDEATRVMFAAPILAFVTTHILYLNFYELDYGWNMKVCVVMAVVQLLAWAIWA GITQHPSRFKLWVVVFGGALAMLLEVYDFPPYKGYADAHSLWHASTIPLTYLWWSFIK DDAEFRTSTLIKKAK</aaseq>

Gene Sequence

<dnaseqindica>4094..4380#3549..3736#3252..3451#2897..3161#423..532#tcatcacattctctcctcgtctcctcctccgcctcaaacctcgccgccggcggccgccacccccgccgccgctctcttctccccccattcccgaacccctcctctccgtcccccacccgcccagacccccgctcagctcttcgccgcggggcgcgaagcccgacgccgcgcaagcccagcctccctccggcgagtccccgttccctcggttcttcttcttcctcgggggagacgccctcctcggtggctctaccgggacctgagccgccgtggagtgaggatccgggtttctggtaagatcgatcgatcgatcgatccatcgctcgcggttgacctggtcgtcttacagttcgtggatcgtgcgtgcattgtctgatcgtgtgcagcatcccgctggtttcagttgggggggggggggtgcgatggctgggtgcggcggcggctgggtggctcggctggctgcgctcctcgtcgtcgggttcgtgctcggctccgtcgacgccagccttggcgatgttgatccgcagtacaggtgagttgtgggagcatgcttgtgcttccttgtcttcttcattcgtctcatcgagttaatacaagtattcgtagttatcgttaattgacttaattctactccaagtggggctatgctggataagtaggctcttgatttttcagtactaagtggtttatctcctaggaaaatgcttgcttacttgggctgttattgatggctaaaccctgtagttagtaaatctcaggtattaggacatagtagcaagtgtagcattgtttggccctctaatatttcaagatgtcctattggttgaattgtggtttgttatcctattcctacctatttgtggaaatatctaaaatacagcttttttttccactctcgaaataagtgttgcttaagtcttattattaaaccttttctgaaaaaaaatacttactagtaatcatgcacatcggatcatgttaatgtgatactgtgtaattattcttatctgaaactggaaattgagcatgatggtcaaatatggttgttttgtgtggatatgcctgacgggaaaagcaacgaaacgatacaacctgaaagttcataaatgattgtgggtatacggcagacattgtcgtagtgaattctgtttatattcttcactgtcagctagacaagattggctattgttgtcaactgtatatctagtcgcacaaaaaacgttgaattcttagttaatgccatagtacctaatgtttcacatttctttgttagtgaaatctttatagagtacacttattattgcagcaggagcagtacatccaatggattatctttagctaaccattgtgacattgtcataggctgatagttgcatcacttcatgtttgaagtttctactctcattattcttgattggtgccatgctgtgagaatattctaagttctaaattagttttaaaaaattaccaaaacaaagctatcagttatatatgtattagtggctcatcagtggtatttcctgaagaaccaactttaactttggtcctttcatgaggctgtcatttgcattgccatcctagtcaaactctttgacaagaatggttgttttcaaagagtcccgtattagtgtacaagtgaaatcgaagttccaagctgatatttaatggcatcaatcgaaatttacaatttcactctcttactctggagtatggacatttattcttcggagtgtaaccaatacacactattccagtattcctagctgtaggctgatttaaacttggttattaagtacatcatgtcttcggtggcttagttatgtaaatttgtaaagaaccaaatctaaagaaactgaccaataagatcatcatttgatgtcaaggaattacagaacttttgttgcagtaatgtttcctgaatatctaaatttattaccgctttttttttttggtatcagattcagagtgaaatatggttaaaaggacaattttaattaccattgccttttattgcacagttgcatgatttcatgggttcacagctgtacgtggcagattggcagtgggatgcctggagacagtcagaaaaattgaaatacaaataaccaataataaatcgtttgaaagatacctgctaaacttaccacatatgccagcaaattaaccaaatttcagagaccaaactcaacagtaaatcgattactaatcctagaagcaggtctcttttttgactgataaacaggagggagtaaggttctcaaagtgattaagtgatagtcatgataaatcgatggtttagtagtgcatgagaaccatatagcttaaaattatcatattgaattatcaaattcacacatcatctaactcatctagtaccatggcatgacataggaactccagggacttgctgcttccagtcaaggcgaatgttcctgctggctcatcttgctgacaggactccctgttgtggactctgatactcgacatatataatctgtgaatgtttaacctactaaaataaatacattttttagttttcttatttttcttgcgccccatacattcaatataatttttcgcgcagttcattgcatttcatttatggtagcaccagtgatatcttctgtttgttcctcttttcctttttctcgaagggtttgcaaagtgacattagtaatttttcacaagattttatttcatgaaccaatgagtgtgtccaacatatttttttgggctttatgaactgaaatttttttgttgctttgttgatctgcgaacccttgttcagtttttatcattctgatgttacccttttgtgttgtatgtattatttgaagttacttctatttctatttagaagtttttggtaattttagctctgtttgtgaactttcagaacttgcgtggaggagtgtcatactacagggattattggggagaacatcataagccactgccagtccccagggaatgatgacgcgtctgttggaagttcttggtacacgcaggagcccctatacatgcagtggaagcaactaaactgtatgaatgactgccgttactactgcatgatgcaaagagaaggtgaaaggcaatcacgtggtctgaaccctgttaagtatcatggaaaatggcccttcatacgtgtttctgtcttccaagtatgtttcaactgtcatattccttactgaaactaccattttcagcttgtctacttctcaagttctcacctgtttgtcatcctttatcaggagccactctcagctgcactgtctgctgtcaacctattgatgcacttcactggctggctttcatttttcctgctggtgaattacaaattacctgttagaccccaaactaagaggacatactacgaatacactggattatggcatatatatgcaatattatcaatgaacgcatggttttggagctctatattccatactaggtatgaagtgctcaaagccatatgtaatgaaacttgagttcatacaccatcataattcataatttgtgatacttacacaccattcttcattctgtagggatatagacttgactgagaagttggattactcttcagctgtggctctacttggctattctttaatcctttcattgttaaggactttcaatgtcaaggacgaggctaccagggtgatgtttgctgctccaattttggcatttgttacaacacacatcttgtatcttaacttctatgagcttgactatggtaaagttccttttcccattgttgaagcattttatcttttaccatcatctaatgagaataatcctgctttagaacaaatatcatcatctaatgagaataatcctgctttagaacaaatatttttctaggctgtaggctcagtaacacccaaatcctctttttaccatgttcctttgtattatgacctacaagagcattaacaccatattagcttatggtgttacaagattttgtcattagcatactgcttagtaatggcatttttcagtcctagtttacaaacttgcttttcagtgtggccataaaagcgtatggttaggcatatggtatttgtatttatccgacatatcttctcagggtggaacatgaaagtttgcgtggtgatggctgtggttcaacttctggcatgggcaatttgggctggcataacccagcatccatcacgattcaagctttgggtggttgtctttggtggtgcacttgctatgcttctcgaagtatacgactttcctccgtacaagggatacgctgatgcacactcgctgtggcatgcaagcaccattcctctcacatatctctggtggagtttcatcaaggatgacgcagaattccgcacatcaactcttattaagaaggcaaagtgactcaaggccgcagattttaactctctgaacatcagatttcttgggcaactcaagggaacatgggacgggttccctatctaacatcgccgaatctcagtgtgtttgccccccccccctagattctcctgtaaaattgattagaacaagtaattcatgtttgcacatcaagattttggtcctcaaactcagcatgttatttccggtgtatcatgtttttgccctgatttgaattttgattagctcgaaacaaaccattatgtagtagaaaacatcatcttgttctggtacctgatggaaagattgaacaatgaggggcccgtgtctgcttatatgtcgaaaattagtctgaagtctgaacatgattt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0220100, RefSeq:Os05g0220100