Os05g0220600

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Revision as of 10:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0220600| Description = Rhomboid-like protein family protein| Version = NM_001061482.1 GI:115462694 GeneID:4338128| Length = 4173 bp| Defin...")
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Gene Name

Os05g0220600

Description

Rhomboid-like protein family protein

Version

NM_001061482.1 GI:115462694 GeneID:4338128

Length

4173 bp

Definition

Oryza sativa Japonica Group Os05g0220600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7429082..7433254

Sequence Coding Region

7429536..7429715,7431407..7431469,7431561..7431727,7431810..7431850,7432040..7432125
,7432807..7432925,7433032..7433206

Expression

GEO Profiles:Os05g0220600

Genome Context

<gbrowseImage1> name=NC_008398:7429082..7433254 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7429082..7433254 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgcagcagctgctgctcctcctcccactcccgctaccttccagaaccttctcgaagcccctcccctcccttcccattcccctccccgccctccgcctctcctcctccgcctacgccgcccgccgccgcgacctgctccgctcgctccgctgcgggatgaggcgctcagacttggtggcggacctggagcttgccaaggacaagcagtggcaggggaggcgtcccaatggcattttctggatcttgctgctcaatgttggaatctatgtcgctgaccacttgttccagattgaacatataaaggcaatgtacttgtaccatgctttccctagttggtttcagtttgtgacatcaacattttgccatgcgaactggaatcatctttcaagcaatctattctttgtatacatttttggaaagctagttgaggaggaagaaggtagttttgcattgtggatgtcttacattttgactggtgctggatcaaacttaatttcatggttggttcttccaacatcttccgtgtcacttggagcatctggtgctgtttttggccttttcacaatcagtgttctagtgaagatgtcatgggactggagaaagattcttgaggtccttatccttggtcaatttgttgttgacaaggtcatggaagccgcacgggcaactactgttacagggcactcgctgcaagtaaacaatattgcccatctatctggtgctttgatcggtgctgcattagtgttcctgataaatcgtatcccttttccatctgatggtgatagttcaaaatcttcaaaggataccagagaaaaaagaagctaa</cdnaseq>

Protein Sequence

<aaseq>MAAQQLLLLLPLPLPSRTFSKPLPSLPIPLPALRLSSSAYAARR RDLLRSLRCGMRRSDLVADLELAKDKQWQGRRPNGIFWILLLNVGIYVADHLFQIEHI KAMYLYHAFPSWFQFVTSTFCHANWNHLSSNLFFVYIFGKLVEEEEGSFALWMSYILT GAGSNLISWLVLPTSSVSLGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVVDKV MEAARATTVTGHSLQVNNIAHLSGALIGAALVFLINRIPFPSDGDSSKSSKDTREKRS </aaseq>

Gene Sequence

<dnaseqindica>3540..3719#1786..1848#1528..1694#1405..1445#1130..1215#330..448#49..223#agcaagagaagaacatccaagcgaagaaggtggggaagagaagaaacaatggcggcgcagcagctgctgctcctcctcccactcccgctaccttccagaaccttctcgaagcccctcccctcccttcccattcccctccccgccctccgcctctcctcctccgcctacgccgcccgccgccgcgacctgctccgctcgctccgctgcgggatgaggcgctcaggtgggtgaggcgagccctccgccgcgaggtggatttgtgttgccgcgggtggtgattcgttgattgaatttaggtgtgtggttcactgacctgtgcttgtgatcagacttggtggcggacctggagcttgccaaggacaagcagtggcaggggaggcgtcccaatggcattttctggatcttgctgctcaatgttggaatctatgtcgctgaccacttgttccaggtacaatgacaacgctaagaaacaaaaataaaaagtaggatcgattagttggttgttttaatctgcacaaatcaatcaatgtgggttgcactgtagagcggcgggctagaaagattgcacaattcaggaagatgtagcctcagagttgttaatttatactagagtacttcccttgggcatattttgattgtcattacaagcaaagcaaccctcaataaaagatcaacggaaggagaaataagccatcttattattttttttaaaaaatacaaccatagtaggctaaaggatgtgtgctttgtttattagaaaatagaaaacatgaaatttggatataaatctctgtaatactagcttgcataacattataacttttggaagaggctaataggctgttccactggctttaggccctaggctcagaggtgcccatggacactccttgagtgaacgggaagagtctctggcctttaacaaaccaaatttgtaattttctaacgtcataagaggtgtcttgtggattgttatttcttgatctatatctaaacatgataagcagttaagcgcatatcttgcaaagctgatttatatacaaaacaacacgggcacatatctattcttcttaattcatctgttgaaatttatctttactttgttgtttgttgtctccttgcatttcagattgaacatataaaggcaatgtacttgtaccatgctttccctagttggtttcagtttgtgacatcaacattttgccatgcgaactggttagttgttactcgttacttgatattccagattccacttccttcattttcttttaacatcagaaaatttatttaatccgtttataaagggataaagatggtagcaaatatacatgtgtgaactgtaccctgtttaacttccttttgagttcaatggccacttattcagttgttcatgatctattgtaggaatcatctttcaagcaatctattctttgtatacatttttggtgagaatcaattgctaaaacaaatgtgctgcttgatggtgacagttctgttaggatcaccaatttattgtaaataatgcaggaaagctagttgaggaggaagaaggtagttttgcattgtggatgtcttacattttgactggtgctggatcaaacttaatttcatggttggttcttccaacatcttccgtgtcacttggagcatctggtgctgtttttggccttttcacaatcagtgttctagtgaaggtgactgtttaaatcttggtcactttcaaaatgttgcctgaattgtcatatcatttaattatttcacctctttgttcccttgttgcaacagatgtcatgggactggagaaagattcttgaggtccttatccttggtcaatttgttgttgacaaggtatatcacaacactttcttatttctttacttatagtcattcaagtattcaactgtagacttgtaagagaaatcatgaacaagtcttatattttttgagacaaaaaaaaactgcaggcagggattcatttttttccatttaaaaaaaatttcctcatgaccagttagtgtctggttttcatcagttttttcttttttaaaaaaataaaaatgctgtttttagcgtttgatatttggataatttataggaaaggagaatatgtctattctgccaaaaaagggaaacaagtagtatcattcatttaacccattaacctacccttctgaagttctgataataagttaagaacaggtacttgccaaaatggcagttaaatgtgatttctcgctgagatctttttcccctgggtgattgtgggatgcccagtccatccagtatttcagtattaggtgctaaattcagatgtaaacaatgtcagtttgtccatttcaagaaatgactgaattctgttagaattctatagtaccaacccacttaattgtagataaatacaccctttaattccaaatagatgtcattttattcacagcaagtaagaaaatagtttaaatgaatttgttgcccttcatttgtactacattaactgggaaatatgagtcatttgtttgtgagagatgtagcatgtattcgacaagggcaaacatggaaacatgagaaagtgcctaaaagttctaaaacgacctacagagaagagctgagaacttgagaaggctaaaacaacctacacattgaatcggtgggagtagatttacaccataaacattcattgctgtgatgggacaaaccattcaggattgacttgtttttaaccattcaggattgacttgtttttccatctgtgatatacataaatatctaaacattcccagatatttgacaattcaagggagactttgattatcgatggtaattcctatgggcttttgtaactctgcaaatggtgttaagtactagaataagtagtcatccctgaaaagaggtagtgtgctctacttctagcaacatatttgaagcataacttattacttactccctccgtcccataatataagaagttttagagttggacatggttattaagaaagtactccctccatttctaaatgtttgacaccgttaactttttagcacatgtttgaccgttcgtgttattcaaaaaaatttgtgaaatatgtaaaactatatgtatatatgaaagtatatttaacaatgaatcaaatgataggaaaagaattaataattactttttttttaataaaacgaatggtcaaacatgcttaaaaagtcaacagcgtcaaatttttagaaacggagagagtagatagaagtgaatagttgagagttgtgattggatgagtagtggaggtaggtgggaaaagtgaatggtggaggattgtgattggttgggaaaagaatgttggtggataagttattatattttaggacaaatcctgagggctaaaagttgttatattttgagacggagggagtatgtaactactctaactactgctacagtaaattaaatgctttacttaactgtgtaccgatttttttatattcgtaccatctttaagtaccaaatgaacattcttgatttacccctcatggtttggttcttaccttgataggtcatggaagccgcacgggcaactactgttacagggcactcgctgcaagtaaacaatattgcccatctatctggtgctttgatcggtgctgcattagtgttcctgataaatcgtatcccttttccatctgatggtgatagttcaaaatcttcaaaggataccagagaaaaaagaagctaatttattctccattgtccaaattaaaacggccactctaacaaaattaacccaatgcattttactttccttgatagttctttgtgtgcaaagtcagcttagttctggtttctatttgaaaagaagtcctatggaagcttaagttccacttacgatacctcggaatcatttcaagggctaagtgtactgctgttcccaaaaggaataaaagaaataaagattatcactttcttgtgtccgagaaattatgtagtgaggcttccagccgttatcagacaggacattttgatttggcattgtgtccagtgaatctcatagctggagagaatcacatccctttgcatggactactgttctgtatatgtcttggtttgcagtccagaattatgatctgtataagattaagaatattagctcttgctgtacttcttctcaaggaaataaaagagcaaatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0220600, RefSeq:Os05g0220600