Os09g0535300

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Revision as of 07:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0535300| Description = XAP5 protein family protein| Version = NM_001070315.1 GI:115480372 GeneID:4347694| Length = 3290 bp| Definition = O...")
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Gene Name

Os09g0535300

Description

XAP5 protein family protein

Version

NM_001070315.1 GI:115480372 GeneID:4347694

Length

3290 bp

Definition

Oryza sativa Japonica Group Os09g0535300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21882337..21885626

Sequence Coding Region

21882460..21882624,21883208..21883273,21883355..21883419,21883506..21883618,21883972..21884047
,21884146..21884222,21884339..21884400,21884492..21884623,21884721..21884774
,21885004..21885069,21885150..21885224,21885306..21885356

Expression

GEO Profiles:Os09g0535300

Genome Context

<gbrowseImage1> name=NC_008402:21882337..21885626 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21882337..21885626 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggggttcggggacgggtacgtcggcacggctcaggacgccgtgaagatccggcggctggagaagcagcgggaggcggagcgccgcaagatcgaggagctcaagaacaagtcctccgatggccagcccggcctgctccagttcggctccagcacctccgagattcttgagactgcgtttaagaaggaaacagtcggtttagttacaagggagcagtatgtcgagaagagggttaatatacggaccaaaattgaggaagaagagaaggagaagcttcaaaagttgcaacaagaggaagaagaattgcaaatgcaaaagcggaaaaagaggagagtgaggggagatccacggttatctttctgtgatgagattgagaatggaagtgatgaggatgaatttgagaatcaagaacctcaaaagaaacatggtcctgtcaaacttgggaaggaccctactgttgagacaagttttcttcctgacagggagagagaagcagaggaacaagcagagcgagagcgtttgaagaaacaatggtcgcgtgagcaggaactgattaaaaatgaacctctgacaattacttacagttactgggatggcactgggcataggagagttatccaggtccgtaaaggtgactccattggagaattcctaagggctgttcagcagcagcttgcccctgagttccgtgaagtgcggacaacatcagttgagaatcttctttatgtgaaggaagatcttattatccctcatcaacatagcttctatgagttgattatcaacaaagcaaggggcaagagtggaccgcttttccactttgatgttcatgaggatgtgcggaccattgctgatgcaacaaaagaaaaggacgagtctcatgcgggaaaagtcgtagagagacactggtatgagaaaaacaaacatatatttcctgcatcaagatgggagatctatgatcctaccaagaagtgggagcgttacacgatccatggagattaa</cdnaseq>

Protein Sequence

<aaseq>MSGFGDGYVGTAQDAVKIRRLEKQREAERRKIEELKNKSSDGQP GLLQFGSSTSEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEE LQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKHGPVKLGKDPTVETSFLP DREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEF LRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDV HEDVRTIADATKEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD</aaseq>

Gene Sequence

<dnaseqindica>124..288#872..937#1019..1083#1170..1282#1636..1711#1810..1886#2003..2064#2156..2287#2385..2438#2668..2733#2814..2888#2970..3020#ggcgagcaatcccaccgccggttgccgtctccaccttccgcggcggccgcgcgtcggctgcgagtttctctggaatctctggaatccctcgtctgaccgaggaagagcggcgggggtgacgagatgtcggggttcggggacgggtacgtcggcacggctcaggacgccgtgaagatccggcggctggagaagcagcgggaggcggagcgccgcaagatcgaggagctcaagaacaagtcctccgatggccagcccggcctgctccagttcggctccagcacctccgaggtatggccatccgccatcatatgaatcggactaggcttctaccttctagggcacacgcgtaggtaggaaaattcgcttgcccgtgaggctcagtgacctactactgatctccgtatttgtgtgcgcgtgcactcgcgaaactagtttgtctctcactagaactggttgtccttacatttttcttaccatgccttcacatattttgttgtacttgtcatcctaggtttttaagcgcttgttctctggtggtgtgatgtgaaattgtcatttgtaatactcttggtcgatacttgtcttatctctcttgtttaatttgattaggatgtggatgttatctatacttctgtagttctatgttggattgctacagctatgtgatttgctgcagaatagcttttgtattgaaccacttctgttatattttgtcttttaaacttaaaagaaaaaacatttccccccatatatgcttcacaattggcatggttctgaattatctcattttctaaaggcacaacagaaatttatatattttttatctgtgttttagaagctaacacctaacagtatggactatgactttcagattcttgagactgcgtttaagaaggaaacagtcggtttagttacaagggagcagtatgtcgagaaggtaatatccagatatatttcttaccattctgtcaaaaagtgaattttcaccatctaatgtttcatccatgtggctgaacagagggttaatatacggaccaaaattgaggaagaagagaaggagaagcttcaaaagttgcaacaagagtgagattggagtcctagtctatcataatttgtgccattaccttatatgtgtatatcaaaatagtttatttattttttgttttcagggaagaagaattgcaaatgcaaaagcggaaaaagaggagagtgaggggagatccacggttatctttctgtgatgagattgagaatggaagtgatgaggatgaatttgagaatcgtatggtcctcttaacctttctagggtcttgtgatatcctattttgtattaccatgttctaacttttttgttaatgtttgaacatctcatgtgacgtcccttaaatgaatcaactcgacaaactaatttagtcaaagcatctaagcaaagattgggtcctgggcagggtttcattcagaatgaacattctctctctattgtttacgttatgaattggcagtttagtgccatggggtttgtgtttgtactgtcctttttttgtgtgtgtgtcctgaatcttgatttgtttaagtttgtgaagttaccttacctgtaaagcaagtatggacattatgctttaaattgttttacagaagaacctcaaaagaaacatggtcctgtcaaacttgggaaggaccctactgttgagacaagttttcttcctgacaggtattcttttagtttatgattatctttctgtgatgatcgattatttgtttccatgtgttgtttaacctgcaagctggttgctaagaatgatccatcagggagagagaagcagaggaacaagcagagcgagagcgtttgaagaaacaatggtcgcgtgagcaggaactgattaaaagtattgccacaagcttatagcattaattaccattagtgtttaatcatttcactctatttttcccttgtgagtaatttttgcatcctaactgattagcaaaatgcctcgtgtgtcagatgaacctctgacaattacttacagttactgggatggcactgggcataggagagttatccaggtaatttctaaccattgaaaaaggtgttcctcttttgattgttctgaacatgtggaccatatgattgaaacaacacctatatacctggcaggtccgtaaaggtgactccattggagaattcctaagggctgttcagcagcagcttgcccctgagttccgtgaagtgcggacaacatcagttgagaatcttctttatgtgaaggaagatcttattatccctcatgtatgcaaagcttatgtttgttaccttgtcaattgcattgttgtttatgtatttttttactcttattttaatcccatgtttgttgttttggtaacagcaacatagcttctatgagttgattatcaacaaagcaaggggcaagagtggaccggtaatgcatgatttgttagtactcctgtggtatttgttttgataaaatatgttgatagcttatatataattcattcatatgtataatcactttattttaagacatggatgtcacaacatagaacttcggttcttctgcggacaggatatttttctgtttgtccagacgaatattgatgacctgagttaatcatttgctgacacttgtttttctgtcctttctttctcagcttttccactttgatgttcatgaggatgtgcggaccattgctgatgcaacaaaagaaaaggacgaggtaacatgtctaccgatatcttgtatttgtagttcccaatgttgcattctaagtttctacctcatgctttatgactgtagtctcatgcgggaaaagtcgtagagagacactggtatgagaaaaacaaacatatatttcctgcatcaagatgggaggttggacattcacctttttatcctttcattcttgtacaaggcatagatattctttggagtaacaactagcctgtcttgcagatctatgatcctaccaagaagtgggagcgttacacgatccatggagattaaaaatcataataatatacagcagaaattgagagccttgaacctgcgcatgtttctactttggatttctgcaacagttattacagtaattgtacggttgtgccaaagatcattagtgtttggaaagaattcacactctaactgtatgctttttaccattttgtggaacgccaattccatgtaactgaactaatgttcaaatcaactagctgtgaatgttttcatactcgttttggatatccgtttgcgtgggagtatgggagattgcatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0535300, RefSeq:Os09g0535300