Os05g0101400

From RiceWiki
Revision as of 20:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0101400

Description

Similar to 50S ribosomal protein L28, chloroplast precursor

Version

NM_001060914.1 GI:115461558 GeneID:4337526

Length

2404 bp

Definition

Oryza sativa Japonica Group Os05g0101400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:75427..77830

Sequence Coding Region

75735..75967,77583..77763

Expression

GEO Profiles:Os05g0101400

Genome Context

<gbrowseImage1> name=NC_008398:75427..77830 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:75427..77830 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccatgctctgctccttcacgcccgccaccagggctccgctccttcgcacttcctcctcctcttcctctctcggcttcgccacctcgcaactcgccggcctcagcctcggcctctccgccgcagccaccaccgcgccctccgccgccggtcccaagctccaccccatcctcgcgcgccggatatgccccttcacggacaagaagaccaacagggcgaacaaggtgtccttctcaaaccacaagacgaagaagcagcagtttgtgaacctgcagtacaagaagctgtggtgggaggaaggcaagcgcttcgtcaagctgcgtctctccaccaaagccctcaagaccatcgagaagcatggcctcgacgccgtcgccaaaaaggccggcatcgacctcaacaagaaataa</cdnaseq>

Protein Sequence

<aaseq>MATMLCSFTPATRAPLLRTSSSSSSLGFATSQLAGLSLGLSAAA TTAPSAAGPKLHPILARRICPFTDKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEEG KRFVKLRLSTKALKTIEKHGLDAVAKKAGIDLNKK</aaseq>

Gene Sequence

<dnaseqindica>1864..2096#68..248#ccacgccgcagccgcacaagacttgatcctcttcttcttcttcttcttcctccaggctccagtggcgatggcgaccatgctctgctccttcacgcccgccaccagggctccgctccttcgcacttcctcctcctcttcctctctcggcttcgccacctcgcaactcgccggcctcagcctcggcctctccgccgcagccaccaccgcgccctccgccgccggtcccaagctccaccccatcctcgcgcgtacgtcatctgcctcctccttcttctctctgtttcgagccatccacccgcagattgacattacagttttatattacaccaccaatgtcatttctgctactattaaagttgttactttatccttcgttttttttttgcgctatccaatactccactgtatatatactactactagaaccagatgacctatttgttagtaattgattgctttaatctctcgaaaatagactagctgtcaatctattaccataaactcagatctttctttgtatttttaagagaatggaagctttattgaatttggtcgttctttgcaccatgtcagtgcacaaccaatagataccacacaacaagaaaaacagaactaactcaacgattaaggacctaatatcggaagactaggttgccgctcatgtgcctgggtaaaaaaaaaaaaccttgaccacatgctccaaatgaagacaagccgaacagacaaaacccctgtaatctggcttcttgagaataatccatgatcggagccaatgtgtgatcaagaaaataacctgcaaagaagaagaaacaattttcctgtcaaaaatcacatcattcctttatagccaaatagcccaacaagtcaactcctagtagaaaaggaggcctagactctttgttttgtcgcaaactccattgtccagacatatgtgacacactcctaggtgaagaaatgttcgatgcaatctggattaaagaccaaactgatcgggctagccgacattcaaaaaataaatgctttatcgtttcttccttgtggtaaaaacaataggtcttattcccttttcaattccgtttagccaggttatcttttgttaacaccacccctcgacataaatacgatagaaacattttcactttgagagggatttttaacttctagatatgtttgttaaaattgggaactcttgtatgtgcaagataatgagttttaaccaagaatcttccatcaggtgttagattcaatttaaagtcatctttctcgtgtgacaacactatattagcaatgcgtggaaagagatgattccacgccactaacttaaggccaataatatccttgcgccaagtgaaatttaacagggttgtttagaatatatttgaaatggttgcttgtttatgtctgacaaccatctctttgtttctctaagacataagcagagcttcttcttcttactagtgtatataagaaagaagggggaaaagaaaaaatataactattctggccatttcaagttatagttttagttttattctaagtcaaccattcataactttaactatcaatttcttatttaaaaagataattgtgacttatcaatttctagaaatttgtaaagtttaacaacatgttaattgtactatatattatgaaggtacttttcatgatgcatatataaacacataaatattatgatattaaatgtttggcttatgataaagttaaggacaagtaatttaaaagggtgagattatactttatcttttgtttgcatgatgccacaaattatagaaactagtagtagtaggaacaagatggcgtgtatggtgatgttgttgtatgatgtgggggtgggtgactcaggccggatatgccccttcacggacaagaagaccaacagggcgaacaaggtgtccttctcaaaccacaagacgaagaagcagcagtttgtgaacctgcagtacaagaagctgtggtgggaggaaggcaagcgcttcgtcaagctgcgtctctccaccaaagccctcaagaccatcgagaagcatggcctcgacgccgtcgccaaaaaggccggcatcgacctcaacaagaaataaatcaaatcatcatcatcatgatgcatacatacatgtattctctcatcaattgccgctgtgctgaatagaccagagctgtatgtagtccattattaaatccattcatctcgatgatgcaatttattgtagagtactacagtatgcattcatcggtggtggtggccggcttcgtttccttaaatttccttttatcccgtgttgctgctgcaagtccggctcgaattgtttgctactagtgtttcatttcggtcgagttcctaattaatactgtatgttggttacgaattataagatggatggatgtaact</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0101400, RefSeq:Os05g0101400