Os05g0105300

From RiceWiki
Revision as of 20:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0105300

Description

CAP-Gly domain containing protein

Version

NM_001060945.1 GI:115461620 GeneID:4337557

Length

5728 bp

Definition

Oryza sativa Japonica Group Os05g0105300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:269434..275161

Sequence Coding Region

269467..269767,270239..270409,271151..271218

Expression

GEO Profiles:Os05g0105300

Genome Context

<gbrowseImage1> name=NC_008398:269434..275161 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:269434..275161 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgtcgccttccgcttgggacagcgcgtgcacgccgccggcgaccccgcccgcgtcggcaccgtgcgttacctcggccctgtcgacggccaccccggagactggctgggcgtcgactgggacgccggcgccggcggccgccatgacgggtcgctcgccggccgccgctacttcgttgccgccggggaacgctccgcctccttcgcgcgccccaccgcgctcagcgccgggatcacgctccccgacgccatacgcaaccgctaccgtgtcgaggaattcaccaaggaggaacaagatgaaatgtatgtcttctcatcaagtcagaagcgcgtgtcagtggaattggttggcaagaacaaagttgaggaaaagctgaaaaacctcaatgatctgaccagtgcatctgtatcctacatgggagtaagctcaattgggccaggagatgaactaaagaatttggttccaaatctcagacagcttgatttaactggaaatcttctctctcagtggcaagtatgtacctcaagagactaa</cdnaseq>

Protein Sequence

<aaseq>MAAVAFRLGQRVHAAGDPARVGTVRYLGPVDGHPGDWLGVDWDA GAGGRHDGSLAGRRYFVAAGERSASFARPTALSAGITLPDAIRNRYRVEEFTKEEQDE MYVFSSSQKRVSVELVGKNKVEEKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNLR QLDLTGNLLSQWQVCTSRD</aaseq>

Gene Sequence

<dnaseqindica>34..334#806..976#1718..1785#acttcgtagtagtagtagtaggagacgacatccatggccgccgtcgccttccgcttgggacagcgcgtgcacgccgccggcgaccccgcccgcgtcggcaccgtgcgttacctcggccctgtcgacggccaccccggagactggctgggcgtcgactgggacgccggcgccggcggccgccatgacgggtcgctcgccggccgccgctacttcgttgccgccggggaacgctccgcctccttcgcgcgccccaccgcgctcagcgccgggatcacgctccccgacgccatacgcaaccgctaccgtgtcgaggaattcaccaaggaggaacaaggtccgcatccctcgattcctcggcttccaaatccaaatcttgctgctcttcattccaccagctagcttctttttcttttttttttcccattccacttattaattttttgctaaaattcatcctagtacatactttctaccttctatgcgttgtaaatagcattcgagaaatcggctacacattttttttgttgcattatacaacttaggctcaagcatccatgttggcatgtgtatatgtactagttcttgaatttgacagttgctcattgcttgagagcatgtatgggacacctcgtgttaaaatttcaaaatcatgtgctattggtgggttggcgtaagattttccagctactctgttttcttttccctgtttcaagggcagaagattttccgttgcttgtaaaagcaatatgcatacacctttttacatttataatgatacccgatataaacattttgttgtgtccagatgaaatgtatgtcttctcatcaagtcagaagcgcgtgtcagtggaattggttggcaagaacaaagttgaggaaaagctgaaaaacctcaatgatctgaccagtgcatctgtatcctacatgggagtaagctcaattgggccaggagatgaactaaagaatttggttccaagtacttactatcctttaatccttaaatcatctcttttatttgattgttttgcaacccagcgatacatgtcaagcttcctgatcttatatattggaaacgttaccttccttagagggaacacaatgtatatattttgtttggttcactggaggctctgcagctaaagcatttagttcactgcatattttggcattggaaatgagataatggaatagagtttatagtttcttaacgtatgcaaaattaaaagggtggtaacctaaagtacttcgtatttgtgtcactttttattctttgagtgtaaatttgagactcgatgtactgaccgactgtaacaacgtcggcatctacaataactgagttgaaataccttttagctgcattttcttattaaagtttcctttagcaaactaaatatgtgttcaccccacagctgggtcattttcaactacaatattctcatatttcctataaagatgacattatgtattggctcacctctagcatctaggttctgggttaagactagtcccttaggacctaattcagttgtatcaccattacataatctatttgaaaatggcatgaattctcttaggccattagtaggcactgagcattggagggatgattttactagtaaacattcattagaaatttgctggcaggactgtcatgcatacttggcctatgtttatcctgaattctgatgagtactgacaatagttttgctcgtttcagatctcagacagcttgatttaactggaaatcttctctctcagtggcaagtatgtacctcaagagactaacattatggttagcacaatttttaattagtatggatataacatacaaaacttcataaattgaaacatgcacagcaaaaggctgtatgctcttcattacaatggtgccacattgtgctgttgaacttcattactcataagcttggagtttattcaaatttatgttattttgacctagaagtaaaacttgtggtatatccctgtattggattattaatacttttcatgtgcgttggtaagctatgtaatcatcaccaaccatcttatctttttcacctctgttgaaagcacatttagcatcttttactcacttgacagtacaggtcacgatttgcttgatatcctgaactttcaattgttttgttatgttttctcacaattgatgctaatgttatgtttcttttggcatttggctgaacagttttgttctttcacaggatatattctctctgtgtgaagctctggcatcactggaaattcttgatttgacaaacaataccatggagaatgactttactgacagttcatctgtcaagaatatccgtgttttggttctcaactactgtggtgtaacatgggaactggtatgccccttggctgacacaatgaagcttctatttattgatgccaatcacagtataagttgatgtttatttatgtgaacaggttgaaaagattaaagtctcattttcatgtctcagtgaactccatctaatgacgaacaggataaaagcaatgatggttagcgtttcttcttgtacatttttttgccatgcattttatgcctactgcttcatttactgttattcatccaaagtaaaacagaaactcctcataaaagttttcccctggctaactggaaaatgatccatttggaaatttgaataggtagtccttccaaatcttgcagtgcaaggttttccttcttcaactttgtgtacattaagaaacagctttgaagaactaactataaactatcatgtgtccgcttatctagactccagttggaaatattgttcaaggtttcgatacactgcgactcttaaatttagaagacaatcacattgattcatgggatgaaattgtgaaactatcttacttaagaaggtacaaatgtataactgaagcttttgtcttaagttaatgttacttctgcatttcagaactgtagatattgatgtttttccttcttttttggggcagcttggaacagctccatttgaataagaacatgctaaaacatgtaacatatccatccaatcctcctccactaggatctcttggcgatgcagctgttttgccttttgaaaaactacgagttcttctcttaggtattttttgtgatctggcttcccttatctattccataacaaaatatcgaatctaagatattttctgtaatatctggcttccgttatctatttgggaaaattgatcatgcgccatgaaatgttttccataatattttctgtttaagaactgcctttaattcaagtaagttcaaaatgacttgctaatgatcactttcaaatgcctcaggatctaaccagatagatgaggtcctttctgtggattcacttaacctctttccgagtttaacagtaagcaagtttctttctaatggtttgtgtttattattctgaaatttagtattgatgttcaattccttttctatgaggtttgaacagttagaactgcaagattttgatacactgcgattcttagatttacaagaatgttatgatgtacaccacactgtatttttattagttatggcttagcacgccaatactaatatctacttttctaaaggatgtcaggctttctgataatcctgtagctgaccctgccaagggcggcgtgcctcgatttgtgcttatcgcccgactaggaaaagttaaaatactgaatggtagtgaggtatgttgagtccctggatgtttcttgagcatgtatgttgtacaaatatgttacttcatctttcttttccatatccagataagtccacgtgagcgaagggaagcagagatacggtcagttaatcccttctgtaaatttattaccttcttttatgatgtatagggcctctgtatatggctagccatccattatttacatgtgtgtttatccatgccaacggtgaatttttcttctggttttctagaaagtgttcttgcacttatctatattgtcttgcttttctcgaaggaataccacaattacgatatctgatacttttgatgcaaaaacatagatatgttcgccttgttatgggaaaagctgaatcatatgatcctgaagagatcaaacggctgcaccctaggtaaggttgtccaatttcccttctttactttttgacaccacatgaccatgatataaccaaaggatttttcactacatatgccattattttgctgcaaaggacacatgttgttacttaaatgatttcaccacatgagctgtgaccttactaactagaaaagctctacctagtcaattccagcctatatgatctcagttatacctgttattcaacaattaggattatatgtctatcttgatgtttacacgcgcttccaaatttgtgttgcttggcttcatttgctaaatttaacttccctgggactaggctgggacagatacctgatgatagtgacgcaccaattattaattggattatgcttaggcaataacgatttgtcaatgcagatttgctgagctgaaagcctttcatggtattgaggatgagaagccgagttcaaggacttctggtcctcaaaaaatggcttctgggcttataagtaataatgttgaactataattaaggcaagagagttgtatggtatgcatgcgaggaagtgattttttcttttcctccgttgcacacaggtatcaccttgaaatgcgtagggccatctatgggtgagaagcaaccattgacaaagaagctgcctcctgcaactactgtaagtacttcttgggtcctattactacttattagctgtccttttttcgtggttgagtctttgagaccagcagatagagaaaaacgattctcttttttcgtatgcacactttccgagctgctaaacggtgtgtgctttacaaaaattatttatagaaaagttgctttaaaaaatcatattaatcaatttttcaagtttgaaataattaatactcaattaatcatgtgttaatgactcacctcgtttggtgtatcttttcaatcttctcctttcctttcctctcaaacacaggttggttatgtttagctttcacatgcgagatattagtggcaacttgctgatagtgatataacatgctctcctgttttgctacgacggctaaattgcctatgatttgcatgttataggttggaaagttaaaatctttgtgcgagagcttctttaaactgaaggacgttaaactgagactgtatcttgaggaagaggtatggattatttgtgctgtgtatgatcattgctcatgtattaaaatgttgtcgagaaaggaaaaaaaaaagaaaagaagaggcagaaagctaggtagggtaaaatacttgcatgctggaacggctgggatctgatcgatttgcattttgacagggttgccctatgccgcaattcttcgaggaagacacggtttctctcatggagcttgggatcggcacgggatcgaccattatcgtggacgaagaaagctagcctaatctagtttactggcattctttgtgtgcgttttaatttgatttatttgagtaaatttggtgtgttgagctggagaaaacaaagtccctgtaacatggtacaaatgctcaagtaacttacactcggcagcttaacgccatcaaatgtgtgtgcatgtacgtgctctcgagtctcgactcgaccacattatgagtcatgacagaaagacaatcattcttgctgtttagtaccttttgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0105300, RefSeq:Os05g0105300